RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 TTC25Q96NG3 672 aa20.67■□□□□ 0.9
HMG20B-213ENST00000488973 HEMGNQ9BXL5 484 aa20.67■□□□□ 0.9
HMG20B-213ENST00000488973 SENP1Q9P0U3 644 aa20.67■□□□□ 0.9
HMG20B-213ENST00000488973 SMG5Q9UPR3 1016 aaKnown RBP20.67■□□□□ 0.9
HMG20B-213ENST00000488973 LRRC42Q9Y546 428 aa20.67■□□□□ 0.9
HMG20B-213ENST00000488973 EXOC1LA0A1B0GW35 172 aa20.66■□□□□ 0.9
HMG20B-213ENST00000488973 KRT5P13647 590 aa20.66■□□□□ 0.9
HMG20B-213ENST00000488973 ITGB5P18084 799 aa20.66■□□□□ 0.9
HMG20B-213ENST00000488973 GCAP28676 217 aa20.66■□□□□ 0.9
HMG20B-213ENST00000488973 ECE1P42892 770 aa20.66■□□□□ 0.9
HMG20B-213ENST00000488973 QARSP47897 775 aaKnown RBP20.66■□□□□ 0.9
HMG20B-213ENST00000488973 DNAJC3Q13217 504 aa20.66■□□□□ 0.9
HMG20B-213ENST00000488973 PDK4Q16654 411 aa20.66■□□□□ 0.9
HMG20B-213ENST00000488973 ANKS1BQ7Z6G8 1248 aa20.66■□□□□ 0.9
HMG20B-213ENST00000488973 NCAPG2Q86XI2 1143 aa20.66■□□□□ 0.9
HMG20B-213ENST00000488973 CHURC1Q8WUH1 139 aa20.66■□□□□ 0.9
HMG20B-213ENST00000488973 RASSF2P50749 326 aa20.66■□□□□ 0.9
HMG20B-213ENST00000488973 USP37Q86T82 979 aa20.66■□□□□ 0.9
HMG20B-213ENST00000488973 RHOT1Q8IXI2 618 aa20.66■□□□□ 0.9
HMG20B-213ENST00000488973 MFSD14AQ96MC6 490 aa20.66■□□□□ 0.9
HMG20B-213ENST00000488973 CAMKK2Q96RR4 588 aa20.66■□□□□ 0.9
HMG20B-213ENST00000488973 OSBPL8Q9BZF1 889 aa20.66■□□□□ 0.9
HMG20B-213ENST00000488973 KCNH7Q9NS40 1196 aa20.66■□□□□ 0.9
HMG20B-213ENST00000488973 CYP39A1Q9NYL5 469 aa20.66■□□□□ 0.9
HMG20B-213ENST00000488973 TMX2Q9Y320 296 aa20.66■□□□□ 0.9
HMG20B-213ENST00000488973 SCN9AQ15858 1988 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 DHX15O43143 795 aaKnown RBP20.65■□□□□ 0.9
HMG20B-213ENST00000488973 PEX11AO75192 247 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 ENTPD3O75355 529 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 FDX1P10109 184 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 STYK1Q6J9G0 422 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 CYP4F22Q6NT55 531 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 POTEAQ6S8J7 498 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 RBM12BQ8IXT5 1001 aaKnown RBP20.65■□□□□ 0.9
HMG20B-213ENST00000488973 KATNAL2Q8IYT4 538 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 NKX1-2Q9UD57 310 aaPredicted RBP20.65■□□□□ 0.9
HMG20B-213ENST00000488973 TBX20Q9UMR3 447 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 UMODL1Q5DID0 1318 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 MYPNQ86TC9 1320 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 EDF1O60869 148 aaKnown RBP20.65■□□□□ 0.9
HMG20B-213ENST00000488973 SPAG7O75391 227 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 COL2A1P02458 1487 aaPredicted RBP20.65■□□□□ 0.9
HMG20B-213ENST00000488973 TARSP26639 723 aaKnown RBP20.65■□□□□ 0.9
HMG20B-213ENST00000488973 P3H1Q32P28 736 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 STRIP1Q5VSL9 837 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 STK32AQ8WU08 396 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 DEFB129Q9H1M3 183 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 TRABDQ9H4I3 376 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 DBNDD1Q9H9R9 158 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 KIAA1586Q9HCI6 787 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 HAO1Q9UJM8 370 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 SERPINA10Q9UK55 444 aa20.65■□□□□ 0.9
HMG20B-213ENST00000488973 ZC3H11AO75152 810 aaKnown RBP eCLIP20.64■□□□□ 0.89
HMG20B-213ENST00000488973 CNGA1P29973 690 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 YWHABP31946 246 aaKnown RBP20.64■□□□□ 0.89
HMG20B-213ENST00000488973 CMPK2Q5EBM0 449 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 SV2AQ7L0J3 742 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 NIPA1Q7RTP0 329 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 PRUNE1Q86TP1 453 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 OGFOD1Q8N543 542 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 EXD1Q8NHP7 514 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.64■□□□□ 0.89
HMG20B-213ENST00000488973 SH3TC2Q8TF17 1288 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 EZH1Q92800 747 aaPredicted RBP20.64■□□□□ 0.89
HMG20B-213ENST00000488973 FBXL18Q96ME1 805 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 KIAA1683Q9H0B3 1180 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 LMCD1Q9NZU5 365 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 RPL26L1Q9UNX3 145 aaKnown RBP20.64■□□□□ 0.89
HMG20B-213ENST00000488973 PCDHGA4Q9Y5G9 962 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 A6NHS1 94 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 TRAFD1O14545 582 aaPredicted RBP20.64■□□□□ 0.89
HMG20B-213ENST00000488973 CDC25CP30307 473 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 ABCD1P33897 745 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 ABL2P42684 1182 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 SLC30A9Q6PML9 568 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 GSTA5Q7RTV2 222 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 MAP4K3Q8IVH8 894 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 ENDOVQ8N8Q3 282 aaKnown RBP20.64■□□□□ 0.89
HMG20B-213ENST00000488973 FAM13CQ8NE31 585 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 KCNV2Q8TDN2 545 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 LRRC8CQ8TDW0 803 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 CPA5Q8WXQ8 436 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 SLC7A6OSQ96CW6 309 aaPredicted RBP20.64■□□□□ 0.89
HMG20B-213ENST00000488973 SMC6Q96SB8 1091 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 PRDM16Q9HAZ2 1276 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 SAYSD1Q9NPB0 183 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 TOPORSQ9NS56 1045 aaPredicted RBP20.64■□□□□ 0.89
HMG20B-213ENST00000488973 PKD2L1Q9P0L9 805 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 PCDHB2Q9Y5E7 798 aa20.64■□□□□ 0.89
HMG20B-213ENST00000488973 COL11A2P13942 1736 aaPredicted RBP20.64■□□□□ 0.89
HMG20B-213ENST00000488973 NSFP46459 744 aaKnown RBP20.63■□□□□ 0.89
HMG20B-213ENST00000488973 ENPEPQ07075 957 aa20.63■□□□□ 0.89
HMG20B-213ENST00000488973 WASHC2DQ5SRD0 308 aa20.63■□□□□ 0.89
HMG20B-213ENST00000488973 DACT2Q5SW24 774 aa20.63■□□□□ 0.89
HMG20B-213ENST00000488973 CWF19L1Q69YN2 538 aaKnown RBP20.63■□□□□ 0.89
HMG20B-213ENST00000488973 PPCSQ9HAB8 311 aa20.63■□□□□ 0.89
HMG20B-213ENST00000488973 DNALI1O14645 258 aaPredicted RBP20.63■□□□□ 0.89
HMG20B-213ENST00000488973 PLA2G6O60733 806 aa20.63■□□□□ 0.89
HMG20B-213ENST00000488973 CYP1A1P04798 512 aaPredicted RBP20.63■□□□□ 0.89
HMG20B-213ENST00000488973 TPBGLP0DKB5 382 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms