RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 ODC1P11926 461 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 BRCC3P46736 316 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 PTPN14Q15678 1187 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 ZSCAN23Q3MJ62 389 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 C1orf220Q5T0J3 134 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 KIAA0319Q5VV43 1072 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 TDRD10Q5VZ19 366 aaKnown RBP17.19■□□□□ 0.34
HDAC7-224ENST00000488927 PLPP4Q5VZY2 271 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 ANKS3Q6ZW76 656 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 SV2AQ7L0J3 742 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 CEP57Q86XR8 500 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 PIK3R5Q8WYR1 880 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 HPDLQ96IR7 371 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 CDCA3Q99618 268 aaPredicted RBP17.19■□□□□ 0.34
HDAC7-224ENST00000488927 BPIFA3Q9BQP9 254 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 EMILIN2Q9BXX0 1053 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 OXCT2Q9BYC2 517 aaPredicted RBP17.19■□□□□ 0.34
HDAC7-224ENST00000488927 DNAJC25Q9H1X3 360 aa17.19■□□□□ 0.34
HDAC7-224ENST00000488927 MAGEC2Q9UBF1 373 aaPredicted RBP17.19■□□□□ 0.34
HDAC7-224ENST00000488927 CDH23Q9H251 3354 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.18■□□□□ 0.34
HDAC7-224ENST00000488927 C2orf71A6NGG8 1288 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 H7C4K7 107 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 NCK2O43639 380 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 N4BP1O75113 896 aaKnown RBP17.18■□□□□ 0.34
HDAC7-224ENST00000488927 PRKCSHP14314 528 aaPredicted RBP17.18■□□□□ 0.34
HDAC7-224ENST00000488927 TYMPP19971 482 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 CA8P35219 290 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 IRS1P35568 1242 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 GCLMP48507 274 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 MXI1P50539 228 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 MYL5Q02045 173 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 PPP3CAQ08209 521 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 NCOA4Q13772 614 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 ANO6Q4KMQ2 910 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 C15orf39Q6ZRI6 1047 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 C11orf57Q6ZUT1 292 aaPredicted RBP17.18■□□□□ 0.34
HDAC7-224ENST00000488927 TAS1R1Q7RTX1 841 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 TRIM59Q8IWR1 403 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 CCDC150Q8NCX0 1101 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 RIN2Q8WYP3 895 aaPredicted RBP17.18■□□□□ 0.34
HDAC7-224ENST00000488927 TAF4BQ92750 862 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 SLC35C1Q96A29 364 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 SENP8Q96LD8 212 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 CNOT6LQ96LI5 555 aaKnown RBP17.18■□□□□ 0.34
HDAC7-224ENST00000488927 IMPG2Q9BZV3 1241 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 GDAP2Q9NXN4 497 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 NFE2L3Q9Y4A8 694 aa17.18■□□□□ 0.34
HDAC7-224ENST00000488927 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.18■□□□□ 0.34
HDAC7-224ENST00000488927 SPTLC1O15269 473 aa17.17■□□□□ 0.34
HDAC7-224ENST00000488927 PMM2O15305 246 aa17.17■□□□□ 0.34
HDAC7-224ENST00000488927 LILRB3O75022 631 aa17.17■□□□□ 0.34
HDAC7-224ENST00000488927 CSPG5O95196 566 aa17.17■□□□□ 0.34
HDAC7-224ENST00000488927 IGFBP6P24592 240 aaPredicted RBP17.17■□□□□ 0.34
HDAC7-224ENST00000488927 TKTP29401 623 aaKnown RBP17.17■□□□□ 0.34
HDAC7-224ENST00000488927 CETN1Q12798 172 aa17.17■□□□□ 0.34
HDAC7-224ENST00000488927 SGSM1Q2NKQ1 1148 aa17.17■□□□□ 0.34
HDAC7-224ENST00000488927 RTP2Q5QGT7 225 aa17.17■□□□□ 0.34
HDAC7-224ENST00000488927 DPH6Q7L8W6 267 aa17.17■□□□□ 0.34
HDAC7-224ENST00000488927 METTL23Q86XA0 190 aa17.17■□□□□ 0.34
HDAC7-224ENST00000488927 TMEM130Q8N3G9 435 aa17.17■□□□□ 0.34
HDAC7-224ENST00000488927 SPATA18Q8TC71 538 aa17.17■□□□□ 0.34
HDAC7-224ENST00000488927 FUCA2Q9BTY2 467 aa17.17■□□□□ 0.34
HDAC7-224ENST00000488927 VRTNQ9H8Y1 702 aa17.17■□□□□ 0.34
HDAC7-224ENST00000488927 RXFP1Q9HBX9 757 aa17.17■□□□□ 0.34
HDAC7-224ENST00000488927 PLXNA4Q9HCM2 1894 aa17.17■□□□□ 0.34
HDAC7-224ENST00000488927 FNIP2Q9P278 1114 aa17.17■□□□□ 0.34
HDAC7-224ENST00000488927 STXBP5LQ9Y2K9 1186 aa17.17■□□□□ 0.34
HDAC7-224ENST00000488927 SMTNL1A8MU46 457 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 HIDE1A8MVS5 230 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 I3L4J1 428 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 C2CD2LO14523 706 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 CYB561D2O14569 222 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 P4HA2O15460 535 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 HUS1O60921 280 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 C1RP00736 705 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 CST3P01034 146 aaPredicted RBP17.16■□□□□ 0.34
HDAC7-224ENST00000488927 CYP11A1P05108 521 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 ADH1AP07327 375 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 P4HA1P13674 534 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 EEF1GP26641 437 aaKnown RBP17.16■□□□□ 0.34
HDAC7-224ENST00000488927 PIK3CAP42336 1068 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 YWHAHQ04917 246 aaPredicted RBP17.16■□□□□ 0.34
HDAC7-224ENST00000488927 PSMD5Q16401 504 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 ZNF699Q32M78 642 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 ZNF280DQ6N043 979 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 PPFIBP1Q86W92 1011 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 TMEM86AQ8N2M4 240 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 TOP6BLQ8N6T0 577 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 FBXL13Q8NEE6 735 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 LNX1Q8TBB1 728 aaPredicted RBP17.16■□□□□ 0.34
HDAC7-224ENST00000488927 FAM84AQ96KN4 292 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 TLE6Q9H808 572 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 MMRN2Q9H8L6 949 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 BACE2Q9Y5Z0 518 aa17.16■□□□□ 0.34
HDAC7-224ENST00000488927 CLSTN1O94985 981 aa17.15■□□□□ 0.34
HDAC7-224ENST00000488927 OAZ2O95190 189 aa17.15■□□□□ 0.34
HDAC7-224ENST00000488927 VNN1O95497 513 aa17.15■□□□□ 0.34
HDAC7-224ENST00000488927 HLA-DRAP01903 254 aa17.15■□□□□ 0.34
HDAC7-224ENST00000488927 FAM163BP0C2L3 166 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms