RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 KIAA0907Q7Z7F0 614 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-217ENST00000487825 NBPF5PQ86XG9 351 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-217ENST00000487825 MB21D1Q8N884 522 aa6.1□□□□□ -1.43
BRCA1-217ENST00000487825 ZNF610Q8N9Z0 462 aa6.1□□□□□ -1.43
BRCA1-217ENST00000487825 PGBD4Q96DM1 585 aa6.1□□□□□ -1.43
BRCA1-217ENST00000487825 ZNF512Q96ME7 567 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-217ENST00000487825 ANO3Q9BYT9 981 aa6.1□□□□□ -1.43
BRCA1-217ENST00000487825 ZNF703Q9H7S9 590 aaPredicted RBP6.1□□□□□ -1.43
BRCA1-217ENST00000487825 PARPBPQ9NWS1 579 aa6.1□□□□□ -1.43
BRCA1-217ENST00000487825 USP36Q9P275 1121 aaKnown RBP6.1□□□□□ -1.43
BRCA1-217ENST00000487825 REXO2Q9Y3B8 237 aaKnown RBP6.1□□□□□ -1.43
BRCA1-217ENST00000487825 SHTN1A0MZ66 631 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 PRSS38A1L453 326 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 GSG1L2A8MUP6 293 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 PPIP5K2O43314 1243 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 STARD3NLO95772 234 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 PFKMP08237 780 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 MYCLP1P12525 358 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-217ENST00000487825 LSP1P33241 339 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 IL6STP40189 918 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-217ENST00000487825 LSSP48449 732 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 MAN2A2P49641 1150 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 PHC1P78364 1004 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 SLC39A6Q13433 755 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 TERF2Q15554 542 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 CRY2Q49AN0 593 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 GPR158Q5T848 1215 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 FNDC7Q5VTL7 733 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 C11orf74Q86VG3 221 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 CDYL2Q8N8U2 506 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 PIK3C3Q8NEB9 887 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 ZNF333Q96JL9 665 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 GPR87Q9BY21 358 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 VPS33BQ9H267 617 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 R3HDMLQ9H3Y0 253 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 MMRN2Q9H8L6 949 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 SLC2A4RGQ9NR83 387 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.09□□□□□ -1.43
BRCA1-217ENST00000487825 CDH23Q9H251 3354 aa6.09□□□□□ -1.43
BRCA1-217ENST00000487825 ZSWIM8A7E2V4 1837 aa6.09□□□□□ -1.44
BRCA1-217ENST00000487825 A0A087X0B3 334 aa6.08□□□□□ -1.44
BRCA1-217ENST00000487825 PDE8AO60658 829 aa6.08□□□□□ -1.44
BRCA1-217ENST00000487825 MFAP3LO75121 409 aa6.08□□□□□ -1.44
BRCA1-217ENST00000487825 RAB11FIP3O75154 756 aa6.08□□□□□ -1.44
BRCA1-217ENST00000487825 ALDH1A2O94788 518 aa6.08□□□□□ -1.44
BRCA1-217ENST00000487825 LY86O95711 162 aa6.08□□□□□ -1.44
BRCA1-217ENST00000487825 MCM7P33993 719 aa6.08□□□□□ -1.44
BRCA1-217ENST00000487825 FKBP1BP68106 108 aa6.08□□□□□ -1.44
BRCA1-217ENST00000487825 SPIDRQ14159 915 aa6.08□□□□□ -1.44
BRCA1-217ENST00000487825 FAM214AQ32MH5 1076 aa6.08□□□□□ -1.44
BRCA1-217ENST00000487825 BROXQ5VW32 411 aa6.08□□□□□ -1.44
BRCA1-217ENST00000487825 ATXN2LQ8WWM7 1075 aaKnown RBP6.08□□□□□ -1.44
BRCA1-217ENST00000487825 GAB3Q8WWW8 586 aa6.08□□□□□ -1.44
BRCA1-217ENST00000487825 FDXACB1Q9BRP7 624 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-217ENST00000487825 EMC7Q9NPA0 242 aa6.08□□□□□ -1.44
BRCA1-217ENST00000487825 CNOT7Q9UIV1 285 aaKnown RBP6.08□□□□□ -1.44
BRCA1-217ENST00000487825 DUOX1Q9NRD9 1551 aa6.08□□□□□ -1.44
BRCA1-217ENST00000487825 ABCC12Q96J65 1359 aa6.07□□□□□ -1.44
BRCA1-217ENST00000487825 KIF7Q2M1P5 1343 aa6.07□□□□□ -1.44
BRCA1-217ENST00000487825 SSC5DA1L4H1 1573 aa6.07□□□□□ -1.44
BRCA1-217ENST00000487825 CLEC2LP0C7M8 214 aa6.07□□□□□ -1.44
BRCA1-217ENST00000487825 XPAP23025 273 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-217ENST00000487825 CASRP41180 1078 aa6.07□□□□□ -1.44
BRCA1-217ENST00000487825 SREBF2Q12772 1141 aa6.07□□□□□ -1.44
BRCA1-217ENST00000487825 TNIP1Q15025 636 aa6.07□□□□□ -1.44
BRCA1-217ENST00000487825 MFSD5Q6N075 450 aa6.07□□□□□ -1.44
BRCA1-217ENST00000487825 CLEC4GQ6UXB4 293 aa6.07□□□□□ -1.44
BRCA1-217ENST00000487825 FRMD7Q6ZUT3 714 aa6.07□□□□□ -1.44
BRCA1-217ENST00000487825 CXorf67Q86X51 503 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-217ENST00000487825 DEFB123Q8N688 67 aa6.07□□□□□ -1.44
BRCA1-217ENST00000487825 OR5M3Q8NGP4 307 aa6.07□□□□□ -1.44
BRCA1-217ENST00000487825 PPP1R14CQ8TAE6 165 aa6.07□□□□□ -1.44
BRCA1-217ENST00000487825 ZNF483Q8TF39 744 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-217ENST00000487825 NEU4Q8WWR8 484 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-217ENST00000487825 DCPSQ96C86 337 aaKnown RBP6.07□□□□□ -1.44
BRCA1-217ENST00000487825 CDCA5Q96FF9 252 aa6.07□□□□□ -1.44
BRCA1-217ENST00000487825 TESK2Q96S53 571 aa6.07□□□□□ -1.44
BRCA1-217ENST00000487825 EPC1Q9H2F5 836 aa6.07□□□□□ -1.44
BRCA1-217ENST00000487825 PPP2R3BQ9Y5P8 575 aa6.07□□□□□ -1.44
BRCA1-217ENST00000487825 HEG1Q9ULI3 1381 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 XDHP47989 1333 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 MTSS1O43312 755 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 SUV39H1O43463 412 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 KDM1AO60341 852 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 FAM20BO75063 409 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 GNAT2P19087 354 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 RABGGTBP53611 331 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 SLC25A3Q00325 362 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 PPARAQ07869 468 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 MGAT5Q09328 741 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 ATP13A4Q4VNC1 1196 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 CCDC62Q6P9F0 684 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 ZNF662Q6ZS27 426 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 UNC5BQ8IZJ1 945 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 DPF2Q92785 391 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 SLC5A5Q92911 643 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 CLIP3Q96DZ5 547 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 FAM122AQ96E09 287 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 MNTQ99583 582 aa6.06□□□□□ -1.44
BRCA1-217ENST00000487825 TRIM8Q9BZR9 551 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms