RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 TUSC3Q13454 348 aa8.59□□□□□ -1.03
RBM28-206ENST00000487602 ASIC2Q16515 512 aa8.59□□□□□ -1.03
RBM28-206ENST00000487602 WDR72Q3MJ13 1102 aa8.59□□□□□ -1.03
RBM28-206ENST00000487602 CYP26C1Q6V0L0 522 aa8.59□□□□□ -1.03
RBM28-206ENST00000487602 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.59□□□□□ -1.034e-8■■■■□ 26.4
RBM28-206ENST00000487602 IRF2BP2Q7Z5L9 587 aa8.59□□□□□ -1.03
RBM28-206ENST00000487602 NPAS4Q8IUM7 802 aa8.59□□□□□ -1.03
RBM28-206ENST00000487602 FAM71AQ8IYT1 594 aa8.59□□□□□ -1.03
RBM28-206ENST00000487602 C7orf61Q8IZ16 206 aa8.59□□□□□ -1.03
RBM28-206ENST00000487602 UBR7Q8N806 425 aa8.59□□□□□ -1.03
RBM28-206ENST00000487602 URGCPQ8TCY9 931 aa8.59□□□□□ -1.03
RBM28-206ENST00000487602 DDX27Q96GQ7 796 aaKnown RBP8.59□□□□□ -1.03
RBM28-206ENST00000487602 ZNF560Q96MR9 790 aa8.59□□□□□ -1.03
RBM28-206ENST00000487602 CHP1Q99653 195 aa8.59□□□□□ -1.03
RBM28-206ENST00000487602 BCO2Q9BYV7 579 aa8.59□□□□□ -1.03
RBM28-206ENST00000487602 CYP3A43Q9HB55 503 aa8.59□□□□□ -1.03
RBM28-206ENST00000487602 GOLGA2P5Q9HBQ8 144 aa8.59□□□□□ -1.03
RBM28-206ENST00000487602 NXF1Q9UBU9 619 aaKnown RBP8.59□□□□□ -1.03
RBM28-206ENST00000487602 POLIQ9UNA4 740 aa8.59□□□□□ -1.03
RBM28-206ENST00000487602 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.59□□□□□ -1.03
RBM28-206ENST00000487602 RALGAPA2Q2PPJ7 1873 aa8.59□□□□□ -1.03
RBM28-206ENST00000487602 PODXLO00592 558 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 ARHGAP6O43182 974 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 EVI5O60447 810 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 GFPT2O94808 682 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 CLSTN1O94985 981 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 FGBP02675 491 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 SERPING1P05155 500 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 FAM163BP0C2L3 166 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 CCDC172P0C7W6 258 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 PNMA6AP0CW24 399 aaPredicted RBP8.58□□□□□ -1.04
RBM28-206ENST00000487602 ACO1P21399 889 aaKnown RBP8.58□□□□□ -1.04
RBM28-206ENST00000487602 CLCN1P35523 988 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 USP8P40818 1118 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 PRKCIP41743 596 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 ASPAP45381 313 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 TAF6P49848 677 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 LILRA4P59901 499 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 YWHAEP62258 255 aaKnown RBP8.58□□□□□ -1.04
RBM28-206ENST00000487602 KLHL30Q0D2K2 578 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 HGSNATQ68CP4 663 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 C16orf59Q7L2K0 433 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 ABI1Q8IZP0 508 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 RSPH1Q8WYR4 309 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 BADQ92934 168 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 UROC1Q96N76 676 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 CASD1Q96PB1 797 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 ARID3AQ99856 593 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 FAM124BQ9H5Z6 455 aaPredicted RBP8.58□□□□□ -1.04
RBM28-206ENST00000487602 TBC1D13Q9NVG8 400 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 ARHGAP20Q9P2F6 1191 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 CNTN6Q9UQ52 1028 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 PCDHB4Q9Y5E5 795 aa8.58□□□□□ -1.04
RBM28-206ENST00000487602 BZW2Q9Y6E2 419 aaKnown RBP8.58□□□□□ -1.04
RBM28-206ENST00000487602 DNAH12Q6ZR08 3092 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 SSU72P8A0A1W2PR75 194 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 CASTOR2A6NHX0 329 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 SOWAHDA6NJG2 315 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 CCDC85CA6NKD9 419 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 TBKBP1A7MCY6 615 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 KPNA7A9QM74 516 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 SPTLC1O15269 473 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 CYP26A1O43174 497 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 BAIAP3O94812 1187 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 DDHD2O94830 711 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 AMHP03971 560 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 PLEKP08567 350 aaPredicted RBP8.57□□□□□ -1.04
RBM28-206ENST00000487602 WEE2P0C1S8 567 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 KRT5P13647 590 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 PAX3P23760 479 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 IGFBP6P24592 240 aaPredicted RBP8.57□□□□□ -1.04
RBM28-206ENST00000487602 EIF4A3P38919 411 aaKnown RBP8.57□□□□□ -1.04
RBM28-206ENST00000487602 GATMP50440 423 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 CLCNKBP51801 687 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 CDH8P55286 799 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 BPIFB4P59827 614 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 WDR5P61964 334 aaKnown RBP8.57□□□□□ -1.04
RBM28-206ENST00000487602 TNNC1P63316 161 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 ARID5AQ03989 594 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 FPGSQ05932 587 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 DSC1Q08554 894 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 UPP1Q16831 310 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 SV2CQ496J9 727 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 TDRD12Q587J7 1177 aaKnown RBP8.57□□□□□ -1.04
RBM28-206ENST00000487602 DCLRE1AQ6PJP8 1040 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 CD300LGQ6UXG3 332 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 RAD9BQ6WBX8 426 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 SCARA5Q6ZMJ2 495 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 ZNF365Q70YC5 407 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 LIMS2Q7Z4I7 341 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 ZNF280BQ86YH2 543 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 GPIHBP1Q8IV16 184 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 COLGALT2Q8IYK4 626 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 CCDC170Q8IYT3 715 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 TNS4Q8IZW8 715 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 TTC39CQ8N584 583 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 TOP1MTQ969P6 601 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 FAM193BQ96PV7 902 aaPredicted RBP8.57□□□□□ -1.04
RBM28-206ENST00000487602 MMS19Q96T76 1030 aa8.57□□□□□ -1.04
RBM28-206ENST00000487602 SDCBP2Q9H190 292 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms