RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 SAAL1Q96ER3 474 aa12.41□□□□□ -0.42
SPEN-205ENST00000487496 SENP8Q96LD8 212 aa12.41□□□□□ -0.42
SPEN-205ENST00000487496 CBWD1Q9BRT8 395 aa12.41□□□□□ -0.42
SPEN-205ENST00000487496 FAM213AQ9BRX8 229 aa12.41□□□□□ -0.42
SPEN-205ENST00000487496 MAGEF1Q9HAY2 307 aa12.41□□□□□ -0.42
SPEN-205ENST00000487496 CYP4F11Q9HBI6 524 aa12.41□□□□□ -0.42
SPEN-205ENST00000487496 ARHGEF37A1IGU5 675 aa12.4□□□□□ -0.42
SPEN-205ENST00000487496 IL18RAPO95256 599 aa12.4□□□□□ -0.42
SPEN-205ENST00000487496 SEC24AO95486 1093 aa12.4□□□□□ -0.42
SPEN-205ENST00000487496 LDHAP00338 332 aaKnown RBP12.4□□□□□ -0.42
SPEN-205ENST00000487496 PDGFBP01127 241 aaPredicted RBP12.4□□□□□ -0.42
SPEN-205ENST00000487496 TYMPP19971 482 aa12.4□□□□□ -0.42
SPEN-205ENST00000487496 PAX3P23760 479 aa12.4□□□□□ -0.42
SPEN-205ENST00000487496 HOXD13P35453 343 aa12.4□□□□□ -0.42
SPEN-205ENST00000487496 WNT7BP56706 349 aa12.4□□□□□ -0.42
SPEN-205ENST00000487496 STXBP4Q6ZWJ1 553 aa12.4□□□□□ -0.42
SPEN-205ENST00000487496 USP37Q86T82 979 aa12.4□□□□□ -0.42
SPEN-205ENST00000487496 NT5DC4Q86YG4 428 aa12.4□□□□□ -0.42
SPEN-205ENST00000487496 BRSK2Q8IWQ3 736 aa12.4□□□□□ -0.42
SPEN-205ENST00000487496 EFCAB13Q8IY85 973 aa12.4□□□□□ -0.42
SPEN-205ENST00000487496 TCEAL8Q8IYN2 117 aa12.4□□□□□ -0.42
SPEN-205ENST00000487496 RSAD2Q8WXG1 361 aa12.4□□□□□ -0.42
SPEN-205ENST00000487496 CHAMP1Q96JM3 812 aa12.4□□□□□ -0.42
SPEN-205ENST00000487496 OXCT2Q9BYC2 517 aaPredicted RBP12.4□□□□□ -0.42
SPEN-205ENST00000487496 BLZF1Q9H2G9 400 aa12.4□□□□□ -0.42
SPEN-205ENST00000487496 HCFC1R1Q9NWW0 138 aa12.4□□□□□ -0.42
SPEN-205ENST00000487496 DPP3Q9NY33 737 aa12.4□□□□□ -0.42
SPEN-205ENST00000487496 DNMT3BQ9UBC3 853 aaKnown RBP12.4□□□□□ -0.42
SPEN-205ENST00000487496 AFF4Q9UHB7 1163 aaKnown RBP12.4□□□□□ -0.42
SPEN-205ENST00000487496 KCNH3Q9ULD8 1083 aa12.4□□□□□ -0.42
SPEN-205ENST00000487496 GOLGA8IPA6NC78 632 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 GOLGA8JA6NMD2 632 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 PRRG1O14668 218 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 EXTL3O43909 919 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 LRG1P02750 347 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 CPB1P15086 417 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 CASP1P29466 404 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 AFMP43652 599 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 EHHADHQ08426 723 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 ADCY1Q08828 1119 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 PABPC1LQ4VXU2 614 aaKnown RBP12.39□□□□□ -0.43
SPEN-205ENST00000487496 FAM26FQ5R3K3 315 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 OVOS1Q6IE37 1185 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 UNC13DQ70J99 1090 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 EPM2AIP1Q7L775 607 aaPredicted RBP12.39□□□□□ -0.43
SPEN-205ENST00000487496 SUGP1Q8IWZ8 645 aaKnown RBP12.39□□□□□ -0.43
SPEN-205ENST00000487496 ITFG1Q8TB96 612 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 ZNF507Q8TCN5 953 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 LEO1Q8WVC0 666 aaPredicted RBP12.39□□□□□ -0.43
SPEN-205ENST00000487496 FGF13Q92913 245 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 NXPE3Q969Y0 559 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 PYM1Q9BRP8 204 aaKnown RBP12.39□□□□□ -0.43
SPEN-205ENST00000487496 PCIF1Q9H4Z3 704 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 RBAKQ9NYW8 714 aaPredicted RBP12.39□□□□□ -0.43
SPEN-205ENST00000487496 CDH7Q9ULB5 785 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 MAFFQ9ULX9 164 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 DUSP12Q9UNI6 340 aa12.39□□□□□ -0.43
SPEN-205ENST00000487496 ZFP37Q9Y6Q3 630 aaPredicted RBP12.39□□□□□ -0.43
SPEN-205ENST00000487496 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.38□□□□□ -0.43
SPEN-205ENST00000487496 OR6C75A6NL08 312 aa12.38□□□□□ -0.43
SPEN-205ENST00000487496 ANHXE9PGG2 379 aa12.38□□□□□ -0.43
SPEN-205ENST00000487496 TULP1O00294 542 aaPredicted RBP12.38□□□□□ -0.43
SPEN-205ENST00000487496 EIF3DO15371 548 aaKnown RBP eCLIP12.38□□□□□ -0.43
SPEN-205ENST00000487496 NARSO43776 548 aaKnown RBP12.38□□□□□ -0.43
SPEN-205ENST00000487496 OR4Q2P0C623 313 aa12.38□□□□□ -0.43
SPEN-205ENST00000487496 ODC1P11926 461 aa12.38□□□□□ -0.43
SPEN-205ENST00000487496 PTPN2P17706 415 aa12.38□□□□□ -0.43
SPEN-205ENST00000487496 TAF6P49848 677 aa12.38□□□□□ -0.43
SPEN-205ENST00000487496 KRT85P78386 507 aa12.38□□□□□ -0.43
SPEN-205ENST00000487496 TFAMQ00059 246 aaKnown RBP12.38□□□□□ -0.43
SPEN-205ENST00000487496 CUL4BQ13620 913 aa12.38□□□□□ -0.43
SPEN-205ENST00000487496 HTR4Q13639 388 aa12.38□□□□□ -0.43
SPEN-205ENST00000487496 ARMCX5Q6P1M9 558 aa12.38□□□□□ -0.43
SPEN-205ENST00000487496 RNF19BQ6ZMZ0 732 aa12.38□□□□□ -0.43
SPEN-205ENST00000487496 GPD1LQ8N335 351 aa12.38□□□□□ -0.43
SPEN-205ENST00000487496 SLC44A3Q8N4M1 653 aa12.38□□□□□ -0.43
SPEN-205ENST00000487496 ST13P5Q8NFI4 369 aaPredicted RBP12.38□□□□□ -0.43
SPEN-205ENST00000487496 BORCS6Q96GS4 357 aa12.38□□□□□ -0.43
SPEN-205ENST00000487496 SPATA32Q96LK8 384 aa12.38□□□□□ -0.43
SPEN-205ENST00000487496 KCNH6Q9H252 994 aa12.38□□□□□ -0.43
SPEN-205ENST00000487496 SERTAD1Q9UHV2 236 aa12.38□□□□□ -0.43
SPEN-205ENST00000487496 INSL5Q9Y5Q6 135 aa12.38□□□□□ -0.43
SPEN-205ENST00000487496 DOCK6Q96HP0 2047 aa12.38□□□□□ -0.43
SPEN-205ENST00000487496 DOCK8Q8NF50 2099 aa12.38□□□□□ -0.43
SPEN-205ENST00000487496 ZNF318Q5VUA4 2279 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 ZDBF2Q9HCK1 2354 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 A0A1B0GVL5 298 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 PVALEFA0A1B0GWK0 134 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 CYB561D2O14569 222 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 KIAA0391O15091 583 aaKnown RBP12.37□□□□□ -0.43
SPEN-205ENST00000487496 TGFB1I1O43294 461 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 ACTN4O43707 911 aaKnown RBP12.37□□□□□ -0.43
SPEN-205ENST00000487496 VNN2O95498 520 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 CYP11A1P05108 521 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 RHOP08100 348 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 SLFN14P0C7P3 912 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 CMA1P23946 247 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 AVPR2P30518 371 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 PLA2G5P39877 138 aa12.37□□□□□ -0.43
SPEN-205ENST00000487496 VCPP55072 806 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms