RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 DHX58Q96C10 678 aa13.5□□□□□ -0.25
ITSN1-229ENST00000487427 SMOC2Q9H3U7 446 aa13.5□□□□□ -0.25
ITSN1-229ENST00000487427 RCOR1Q9UKL0 485 aa13.5□□□□□ -0.25
ITSN1-229ENST00000487427 PCDHA7Q9UN72 937 aa13.5□□□□□ -0.25
ITSN1-229ENST00000487427 ANO9A1A5B4 782 aa13.49□□□□□ -0.25
ITSN1-229ENST00000487427 PIRO00625 290 aa13.49□□□□□ -0.25
ITSN1-229ENST00000487427 IL18RAPO95256 599 aa13.49□□□□□ -0.25
ITSN1-229ENST00000487427 LDHAP00338 332 aaKnown RBP13.49□□□□□ -0.25
ITSN1-229ENST00000487427 TYMPP19971 482 aa13.49□□□□□ -0.25
ITSN1-229ENST00000487427 GARTP22102 1010 aa13.49□□□□□ -0.25
ITSN1-229ENST00000487427 CASP5P51878 434 aa13.49□□□□□ -0.25
ITSN1-229ENST00000487427 NTHL1P78549 312 aa13.49□□□□□ -0.25
ITSN1-229ENST00000487427 C9orf57Q5W0N0 161 aa13.49□□□□□ -0.25
ITSN1-229ENST00000487427 DSTYKQ6XUX3 929 aa13.49□□□□□ -0.25
ITSN1-229ENST00000487427 GET4Q7L5D6 327 aaPredicted RBP13.49□□□□□ -0.25
ITSN1-229ENST00000487427 TRIM9Q9C026 710 aa13.49□□□□□ -0.25
ITSN1-229ENST00000487427 TMEM206Q9H813 350 aa13.49□□□□□ -0.25
ITSN1-229ENST00000487427 CYP4F11Q9HBI6 524 aa13.49□□□□□ -0.25
ITSN1-229ENST00000487427 DNMT3BQ9UBC3 853 aaKnown RBP13.49□□□□□ -0.25
ITSN1-229ENST00000487427 AFF4Q9UHB7 1163 aaKnown RBP13.49□□□□□ -0.25
ITSN1-229ENST00000487427 CDH7Q9ULB5 785 aa13.49□□□□□ -0.25
ITSN1-229ENST00000487427 KCNH3Q9ULD8 1083 aa13.49□□□□□ -0.25
ITSN1-229ENST00000487427 TIMM13Q9Y5L4 95 aaPredicted RBP13.49□□□□□ -0.25
ITSN1-229ENST00000487427 MYH11P35749 1972 aa13.49□□□□□ -0.25
ITSN1-229ENST00000487427 ZDBF2Q9HCK1 2354 aa13.49□□□□□ -0.25
ITSN1-229ENST00000487427 MYO10Q9HD67 2058 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 OR6C75A6NL08 312 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 ANHXE9PGG2 379 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 PPEF2O14830 753 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 POLR2DO15514 142 aaKnown RBP13.48□□□□□ -0.25
ITSN1-229ENST00000487427 PRPF6O94906 941 aaKnown RBP13.48□□□□□ -0.25
ITSN1-229ENST00000487427 SEC24AO95486 1093 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 PDGFBP01127 241 aaPredicted RBP13.48□□□□□ -0.25
ITSN1-229ENST00000487427 LRG1P02750 347 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 PTPN2P17706 415 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 AVPR2P30518 371 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 DNM1Q05193 864 aaKnown RBP13.48□□□□□ -0.25
ITSN1-229ENST00000487427 PABPC1LQ4VXU2 614 aaKnown RBP13.48□□□□□ -0.25
ITSN1-229ENST00000487427 NT5DC4Q86YG4 428 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 RSAD2Q8WXG1 361 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 FGF13Q92913 245 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 SENP8Q96LD8 212 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 PRRX2Q99811 253 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 C7orf25Q9BPX7 421 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 FAM213AQ9BRX8 229 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 FGFBP2Q9BYJ0 223 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 MAGEF1Q9HAY2 307 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 AVENQ9NQS1 362 aaPredicted RBP13.48□□□□□ -0.25
ITSN1-229ENST00000487427 HCFC1R1Q9NWW0 138 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 DPP3Q9NY33 737 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 FAM13BQ9NYF5 915 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 DUSP12Q9UNI6 340 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 TRIP11Q15643 1979 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 PLXNA3P51805 1871 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 MUC6Q6W4X9 2439 aa13.48□□□□□ -0.25
ITSN1-229ENST00000487427 KIAA0391O15091 583 aaKnown RBP13.47□□□□□ -0.25
ITSN1-229ENST00000487427 SPTLC1O15269 473 aa13.47□□□□□ -0.25
ITSN1-229ENST00000487427 EXTL3O43909 919 aa13.47□□□□□ -0.25
ITSN1-229ENST00000487427 RHOP08100 348 aa13.47□□□□□ -0.25
ITSN1-229ENST00000487427 ODC1P11926 461 aa13.47□□□□□ -0.25
ITSN1-229ENST00000487427 CPB1P15086 417 aa13.47□□□□□ -0.25
ITSN1-229ENST00000487427 ASIC1P78348 528 aa13.47□□□□□ -0.25
ITSN1-229ENST00000487427 ADCY1Q08828 1119 aa13.47□□□□□ -0.25
ITSN1-229ENST00000487427 PDAP1Q13442 181 aaKnown RBP13.47□□□□□ -0.25
ITSN1-229ENST00000487427 HTR4Q13639 388 aa13.47□□□□□ -0.25
ITSN1-229ENST00000487427 IER5LQ5T953 404 aa13.47□□□□□ -0.25
ITSN1-229ENST00000487427 RESP18Q5W5W9 173 aa13.47□□□□□ -0.25
ITSN1-229ENST00000487427 OVOS1Q6IE37 1185 aa13.47□□□□□ -0.25
ITSN1-229ENST00000487427 ITFG1Q8TB96 612 aa13.47□□□□□ -0.25
ITSN1-229ENST00000487427 PYM1Q9BRP8 204 aaKnown RBP13.47□□□□□ -0.25
ITSN1-229ENST00000487427 WNT16Q9UBV4 365 aa13.47□□□□□ -0.25
ITSN1-229ENST00000487427 FBXL21Q9UKT6 434 aa13.47□□□□□ -0.25
ITSN1-229ENST00000487427 MRPS23Q9Y3D9 190 aaKnown RBP13.47□□□□□ -0.25
ITSN1-229ENST00000487427 INSL5Q9Y5Q6 135 aa13.47□□□□□ -0.25
ITSN1-229ENST00000487427 CITO14578 2027 aa13.46□□□□□ -0.25
ITSN1-229ENST00000487427 SRFP11831 508 aa13.46□□□□□ -0.25
ITSN1-229ENST00000487427 CLCN5P51795 746 aa13.46□□□□□ -0.25
ITSN1-229ENST00000487427 VCPP55072 806 aaKnown RBP13.46□□□□□ -0.25
ITSN1-229ENST00000487427 GPR17Q13304 367 aa13.46□□□□□ -0.25
ITSN1-229ENST00000487427 MYBPC2Q14324 1141 aa13.46□□□□□ -0.25
ITSN1-229ENST00000487427 ARMCX5Q6P1M9 558 aa13.46□□□□□ -0.25
ITSN1-229ENST00000487427 RNF19BQ6ZMZ0 732 aa13.46□□□□□ -0.25
ITSN1-229ENST00000487427 BRSK2Q8IWQ3 736 aa13.46□□□□□ -0.25
ITSN1-229ENST00000487427 EFCAB13Q8IY85 973 aa13.46□□□□□ -0.25
ITSN1-229ENST00000487427 ELMOD1Q8N336 334 aa13.46□□□□□ -0.25
ITSN1-229ENST00000487427 CACTINQ8WUQ7 758 aaKnown RBP13.46□□□□□ -0.25
ITSN1-229ENST00000487427 HPS3Q969F9 1004 aa13.46□□□□□ -0.25
ITSN1-229ENST00000487427 SAAL1Q96ER3 474 aa13.46□□□□□ -0.25
ITSN1-229ENST00000487427 CBWD1Q9BRT8 395 aa13.46□□□□□ -0.25
ITSN1-229ENST00000487427 MFSD1Q9H3U5 465 aa13.46□□□□□ -0.25
ITSN1-229ENST00000487427 RBAKQ9NYW8 714 aaPredicted RBP13.46□□□□□ -0.25
ITSN1-229ENST00000487427 GDE1Q9NZC3 331 aa13.46□□□□□ -0.25
ITSN1-229ENST00000487427 DSEQ9UL01 958 aa13.46□□□□□ -0.25
ITSN1-229ENST00000487427 VWA8A3KMH1 1905 aa13.46□□□□□ -0.25
ITSN1-229ENST00000487427 MTCL1Q9Y4B5 1905 aaKnown RBP13.45□□□□□ -0.26
ITSN1-229ENST00000487427 PVALEFA0A1B0GWK0 134 aa13.45□□□□□ -0.26
ITSN1-229ENST00000487427 HAX1O00165 279 aa13.45□□□□□ -0.26
ITSN1-229ENST00000487427 CYB561D2O14569 222 aa13.45□□□□□ -0.26
ITSN1-229ENST00000487427 ZNF197O14709 1029 aa13.45□□□□□ -0.26
ITSN1-229ENST00000487427 EIF3DO15371 548 aaKnown RBP eCLIP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms