RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 KCNC4Q03721 635 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 POU5F1BQ06416 359 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 FUT2Q10981 343 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 SLC14A1Q13336 389 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 PTPAQ15257 358 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 MAPK6Q16659 721 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 SPDYCQ5MJ68 293 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 STXBP5Q5T5C0 1151 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 ANKRD45Q5TZF3 282 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 TPGS2Q68CL5 300 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 PLA2G4FQ68DD2 849 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 SLC27A1Q6PCB7 646 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 SLCO6A1Q86UG4 719 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 TMC8Q8IU68 726 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 ELMOD1Q8N336 334 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 ZNF579Q8NAF0 562 aaKnown RBP12.93□□□□□ -0.34
TRIM56-204ENST00000487252 FANCBQ8NB91 859 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 SLC7A3Q8WY07 619 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 EZH1Q92800 747 aaPredicted RBP12.93□□□□□ -0.34
TRIM56-204ENST00000487252 TMEM143Q96AN5 459 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 CNOT6LQ96LI5 555 aaKnown RBP12.93□□□□□ -0.34
TRIM56-204ENST00000487252 FAM83CQ9BQN1 747 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 CXCL16Q9H2A7 254 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 SLITRK6Q9H5Y7 841 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 CAPN10Q9HC96 672 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 PARP2Q9UGN5 583 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 TPCN1Q9ULQ1 816 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 MAFFQ9ULX9 164 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 PPME1Q9Y570 386 aa12.93□□□□□ -0.34
TRIM56-204ENST00000487252 UBR5O95071 2799 aaPredicted RBP12.93□□□□□ -0.34
TRIM56-204ENST00000487252 ANKRD17O75179 2603 aaKnown RBP12.92□□□□□ -0.34
TRIM56-204ENST00000487252 MUC22E2RYF6 1773 aaPredicted RBP12.92□□□□□ -0.34
TRIM56-204ENST00000487252 HIP1O00291 1037 aa12.92□□□□□ -0.34
TRIM56-204ENST00000487252 GAS7O60861 476 aa12.92□□□□□ -0.34
TRIM56-204ENST00000487252 PTGER3P43115 390 aa12.92□□□□□ -0.34
TRIM56-204ENST00000487252 MBTD1Q05BQ5 628 aa12.92□□□□□ -0.34
TRIM56-204ENST00000487252 NCBP1Q09161 790 aaKnown RBP12.92□□□□□ -0.34
TRIM56-204ENST00000487252 TWF1Q12792 350 aa12.92□□□□□ -0.34
TRIM56-204ENST00000487252 MRPL58Q14197 206 aaKnown RBP12.92□□□□□ -0.34
TRIM56-204ENST00000487252 GPIHBP1Q8IV16 184 aa12.92□□□□□ -0.34
TRIM56-204ENST00000487252 SMC5Q8IY18 1101 aa12.92□□□□□ -0.34
TRIM56-204ENST00000487252 EXOC8Q8IYI6 725 aa12.92□□□□□ -0.34
TRIM56-204ENST00000487252 TMTC2Q8N394 836 aa12.92□□□□□ -0.34
TRIM56-204ENST00000487252 RPLP0P6Q8NHW5 317 aa12.92□□□□□ -0.34
TRIM56-204ENST00000487252 PIP4K2CQ8TBX8 421 aa12.92□□□□□ -0.34
TRIM56-204ENST00000487252 BPIFB1Q8TDL5 484 aa12.92□□□□□ -0.34
TRIM56-204ENST00000487252 FNBP1Q96RU3 617 aa12.92□□□□□ -0.34
TRIM56-204ENST00000487252 TPSD1Q9BZJ3 242 aa12.92□□□□□ -0.34
TRIM56-204ENST00000487252 HPS4Q9NQG7 708 aa12.92□□□□□ -0.34
TRIM56-204ENST00000487252 SLC6A14Q9UN76 642 aa12.92□□□□□ -0.34
TRIM56-204ENST00000487252 APOBEC2Q9Y235 224 aaKnown RBP12.92□□□□□ -0.34
TRIM56-204ENST00000487252 TSC2P49815 1807 aa12.92□□□□□ -0.34
TRIM56-204ENST00000487252 A0A1W2PRU2 124 aa12.91□□□□□ -0.34
TRIM56-204ENST00000487252 TRABD2BA6NFA1 517 aa12.91□□□□□ -0.34
TRIM56-204ENST00000487252 SH3BP5O60239 455 aa12.91□□□□□ -0.34
TRIM56-204ENST00000487252 CBFA2T3O75081 653 aa12.91□□□□□ -0.34
TRIM56-204ENST00000487252 PRKCBP05771 671 aa12.91□□□□□ -0.34
TRIM56-204ENST00000487252 NPEPPSP55786 919 aa12.91□□□□□ -0.34
TRIM56-204ENST00000487252 LRCH2Q5VUJ6 765 aa12.91□□□□□ -0.34
TRIM56-204ENST00000487252 TMEFF1Q8IYR6 380 aa12.91□□□□□ -0.34
TRIM56-204ENST00000487252 MINDY1Q8N5J2 469 aa12.91□□□□□ -0.34
TRIM56-204ENST00000487252 ACDQ96AP0 544 aa12.91□□□□□ -0.34
TRIM56-204ENST00000487252 TEKT3Q9BXF9 490 aa12.91□□□□□ -0.34
TRIM56-204ENST00000487252 FSCN3Q9NQT6 498 aa12.91□□□□□ -0.34
TRIM56-204ENST00000487252 GOLGA4Q13439 2230 aaKnown RBP12.9□□□□□ -0.34
TRIM56-204ENST00000487252 SH2B2O14492 632 aaPredicted RBP12.9□□□□□ -0.34
TRIM56-204ENST00000487252 MAP3K13O43283 966 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 B4GALT5O43286 388 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 B3GAT3O94766 335 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 NPTXRO95502 500 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 PRAMEF12O95522 483 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 SERPINF2P08697 491 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 ITPKBP27987 946 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 RFC5P40937 340 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 P2RY2P41231 377 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 LIFRP42702 1097 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 MCM2P49736 904 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 GALK1P51570 392 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 ATXN3P54252 364 aaPredicted RBP12.9□□□□□ -0.34
TRIM56-204ENST00000487252 GFPT1Q06210 699 aaPredicted RBP12.9□□□□□ -0.34
TRIM56-204ENST00000487252 RUNX3Q13761 415 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 UPP1Q16831 310 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 DUOXA1Q1HG43 343 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 LPCAT2Q7L5N7 544 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 MIER3Q7Z3K6 550 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 CDR2LQ86X02 465 aaPredicted RBP12.9□□□□□ -0.34
TRIM56-204ENST00000487252 PLEKHM2Q8IWE5 1019 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 C3orf58Q8NDZ4 430 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 TSTD1Q8NFU3 115 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 CEP76Q8TAP6 659 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 GJA10Q969M2 543 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 GTPBP2Q9BX10 602 aaKnown RBP12.9□□□□□ -0.34
TRIM56-204ENST00000487252 NFKBIZQ9BYH8 718 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 ZBTB47Q9UFB7 747 aaPredicted RBP12.9□□□□□ -0.34
TRIM56-204ENST00000487252 AFF4Q9UHB7 1163 aaKnown RBP12.9□□□□□ -0.34
TRIM56-204ENST00000487252 TBX20Q9UMR3 447 aa12.9□□□□□ -0.34
TRIM56-204ENST00000487252 TEX51A0A1B0GUA7 166 aa12.89□□□□□ -0.35
TRIM56-204ENST00000487252 ESYT2A0FGR8 921 aa12.89□□□□□ -0.35
TRIM56-204ENST00000487252 INO80B-WBP1J3KQ70 363 aa12.89□□□□□ -0.35
TRIM56-204ENST00000487252 DPYSL4O14531 572 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms