RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 S1PR5Q9H228 398 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 CUEDC2Q9H467 287 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 MRPL17Q9NRX2 175 aaKnown RBP7.8□□□□□ -1.16
UBE4B-209ENST00000487244 CHST7Q9NS84 486 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 FAM13BQ9NYF5 915 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 SEL1LQ9UBV2 794 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 SERTAD1Q9UHV2 236 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 KCNG1Q9UIX4 513 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 HPSEQ9Y251 543 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 USP15Q9Y4E8 981 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-209ENST00000487244 DOCK8Q8NF50 2099 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 MYO10Q9HD67 2058 aa7.8□□□□□ -1.16
UBE4B-209ENST00000487244 TMEM189-UBE2V1I3L0A0 370 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 PODXLO00592 558 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 PPEF2O14830 753 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 ADAM12O43184 909 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 SPATA31D3P0C874 917 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 SCP2P22307 547 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 CMA1P23946 247 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 KLRC2P26717 231 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 TKTP29401 623 aaKnown RBP7.79□□□□□ -1.16
UBE4B-209ENST00000487244 CLCN4P51793 760 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 NDUFA8P51970 172 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 ZP2Q05996 745 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 EHHADHQ08426 723 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 SMAD2Q15796 467 aaKnown RBP7.79□□□□□ -1.16
UBE4B-209ENST00000487244 USP41Q3LFD5 358 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 RARS2Q5T160 578 aaKnown RBP7.79□□□□□ -1.16
UBE4B-209ENST00000487244 FAM171A1Q5VUB5 890 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 ADALQ6DHV7 355 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 JADE1Q6IE81 842 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 KIAA1841Q6NSI8 718 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 CNNM4Q6P4Q7 775 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 CRELD2Q6UXH1 353 aaPredicted RBP7.79□□□□□ -1.16
UBE4B-209ENST00000487244 SPATA31D4Q6ZUB0 917 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 EPM2AIP1Q7L775 607 aaPredicted RBP7.79□□□□□ -1.16
UBE4B-209ENST00000487244 CEP57Q86XR8 500 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 CCDC65Q8IXS2 484 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 SUSD6Q92537 303 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 SAAL1Q96ER3 474 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 PAGE5Q96GU1 130 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 ACCSQ96QU6 501 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 C7orf25Q9BPX7 421 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 CBWD1Q9BRT8 395 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 CPSF3Q9UKF6 684 aaKnown RBP7.79□□□□□ -1.16
UBE4B-209ENST00000487244 STYXL1Q9Y6J8 313 aa7.79□□□□□ -1.16
UBE4B-209ENST00000487244 NOTCH4Q99466 2003 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 GOLGA8IPA6NC78 632 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 GOLGA8JA6NMD2 632 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 KLRC4O43908 158 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 ADRB2P07550 413 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 SLFN14P0C7P3 912 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 FGFR3P22607 806 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 SP100P23497 879 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-209ENST00000487244 PPP2R3AQ06190 1150 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 BMS1Q14692 1282 aaKnown RBP7.78□□□□□ -1.16
UBE4B-209ENST00000487244 AGERQ15109 404 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 ZBTB6Q15916 424 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 FAM26FQ5R3K3 315 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 SCARA3Q6AZY7 606 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 DCLRE1AQ6PJP8 1040 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 RSPO2Q6UXX9 243 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-209ENST00000487244 TMC5Q6UXY8 1006 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 PALB2Q86YC2 1186 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 ADHFE1Q8IWW8 467 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 EFCAB13Q8IY85 973 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 CEP57L1Q8IYX8 460 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 FSIP1Q8NA03 581 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 TMEM87AQ8NBN3 555 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 LNX1Q8TBB1 728 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-209ENST00000487244 LRRN4Q8WUT4 740 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 POMGNT1Q8WZA1 660 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 CASP10Q92851 521 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 FBXL18Q96ME1 805 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 UROC1Q96N76 676 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 CLSTN3Q9BQT9 956 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 FAM213AQ9BRX8 229 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 TTPALQ9BTX7 342 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 EMILIN2Q9BXX0 1053 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 SCAND2PQ9GZW5 306 aaPredicted RBP7.78□□□□□ -1.16
UBE4B-209ENST00000487244 PCIF1Q9H4Z3 704 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 RPF1Q9H9Y2 349 aaKnown RBP7.78□□□□□ -1.16
UBE4B-209ENST00000487244 PLEKHA5Q9HAU0 1116 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 MAGEF1Q9HAY2 307 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 RXFP1Q9HBX9 757 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 MAN1C1Q9NR34 630 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 SLC38A7Q9NVC3 462 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 STK39Q9UEW8 545 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 AGO2Q9UKV8 859 aaKnown RBP7.78□□□□□ -1.16
UBE4B-209ENST00000487244 ATP6V1DQ9Y5K8 247 aa7.78□□□□□ -1.16
UBE4B-209ENST00000487244 FAM237AA0A1B0GTK4 181 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 A0A1W2PQ27 194 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 A0A1W2PQ64 194 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 A0A1W2PQD8 194 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 FSD2A1L4K1 749 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 TGFB1I1O43294 461 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 TGM5O43548 720 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 RFPL2O75678 378 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 ADH1AP07327 375 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 SRGAP2BP0DMP2 458 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms