RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 CC2D2BQ6DHV5 1058 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 C1orf228Q6PIY5 440 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 TRIM67Q6ZTA4 783 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 ANO5Q75V66 913 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 NET1Q7Z628 596 aaPredicted RBP6.58□□□□□ -1.36
VPS13D-209ENST00000487188 TMPRSS6Q8IU80 811 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 PPM1KQ8N3J5 372 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 ZNF713Q8N859 430 aaPredicted RBP6.58□□□□□ -1.36
VPS13D-209ENST00000487188 TGFBRAP1Q8WUH2 860 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 KLHL4Q9C0H6 718 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 TAS2R1Q9NYW7 299 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 ZBTB1Q9Y2K1 713 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 NEU2Q9Y3R4 380 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.58□□□□□ -1.36
VPS13D-209ENST00000487188 STRNO43815 780 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 LPXNO60711 386 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 RNASEH1O60930 286 aaKnown RBP6.58□□□□□ -1.36
VPS13D-209ENST00000487188 DNAJC6O75061 913 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 CYP1A1P04798 512 aaPredicted RBP6.58□□□□□ -1.36
VPS13D-209ENST00000487188 VIL1P09327 827 aaKnown RBP6.58□□□□□ -1.36
VPS13D-209ENST00000487188 MUTP22033 750 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 PRDX5P30044 214 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 MLH1P40692 756 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 EIF6P56537 245 aaKnown RBP6.58□□□□□ -1.36
VPS13D-209ENST00000487188 PDIA2Q13087 525 aaKnown RBP6.58□□□□□ -1.36
VPS13D-209ENST00000487188 ITGA9Q13797 1035 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 KRT81Q14533 505 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 CYP1B1Q16678 543 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 MAP7D1Q3KQU3 841 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 DPY19L2Q6NUT2 758 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 ANKMY2Q8IV38 441 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 SLC30A5Q8TAD4 765 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 NSUN4Q96CB9 384 aaKnown RBP6.58□□□□□ -1.36
VPS13D-209ENST00000487188 DGCR14Q96DF8 476 aaKnown RBP6.58□□□□□ -1.36
VPS13D-209ENST00000487188 OXNAD1Q96HP4 312 aaPredicted RBP6.58□□□□□ -1.36
VPS13D-209ENST00000487188 C8orf37Q96NL8 207 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 HOMER2Q9NSB8 354 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 WNK3Q9BYP7 1800 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 ESYT2A0FGR8 921 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 GOLGA8SH3BPF8 625 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 GOLGA8MH3BSY2 632 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 OR6B1O95007 311 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 SPATA31D3P0C874 917 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 PABPC4LP0CB38 370 aaKnown RBP6.58□□□□□ -1.36
VPS13D-209ENST00000487188 KRT5P13647 590 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 ATF7P17544 494 aaPredicted RBP6.58□□□□□ -1.36
VPS13D-209ENST00000487188 MAGEA10P43363 369 aaPredicted RBP6.58□□□□□ -1.36
VPS13D-209ENST00000487188 CHN2P52757 468 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 ALDH18A1P54886 795 aaKnown RBP6.58□□□□□ -1.36
VPS13D-209ENST00000487188 PDK3Q15120 406 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 EAPPQ56P03 285 aaPredicted RBP6.58□□□□□ -1.36
VPS13D-209ENST00000487188 SPATA31D4Q6ZUB0 917 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 PRPF39Q86UA1 669 aaKnown RBP6.58□□□□□ -1.36
VPS13D-209ENST00000487188 PALM2Q8IXS6 379 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 LRRC47Q8N1G4 583 aaKnown RBP6.58□□□□□ -1.36
VPS13D-209ENST00000487188 TAB3Q8N5C8 712 aaPredicted RBP6.58□□□□□ -1.36
VPS13D-209ENST00000487188 ZBTB8BQ8NAP8 495 aaPredicted RBP6.58□□□□□ -1.36
VPS13D-209ENST00000487188 GSDMBQ8TAX9 411 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 PYDC1Q8WXC3 89 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 SLC5A5Q92911 643 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 HAPLN3Q96S86 360 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 FOXP3Q9BZS1 431 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 DCLK3Q9C098 648 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 GRIP2Q9C0E4 1043 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 BHMT2Q9H2M3 363 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 LRRC4BQ9NT99 713 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 ARHGEF38Q9NXL2 777 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 PCDHA3Q9Y5H8 950 aa6.58□□□□□ -1.36
VPS13D-209ENST00000487188 A0A0J9YVX5 310 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 USP17L5A8MUK1 530 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 F8W8V4 182 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 ABHD2P08910 425 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 KITP10721 976 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 IL2RBP14784 551 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 RXRBP28702 533 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 RFC4P35249 363 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 TMPRSS15P98073 1019 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 GPS1Q13098 491 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 MAPK6Q16659 721 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 PRR16Q569H4 304 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 LRRC8BQ6P9F7 803 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 DHDDSQ86SQ9 333 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 ULK2Q8IYT8 1036 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 C12orf50Q8NA57 414 aaPredicted RBP6.57□□□□□ -1.36
VPS13D-209ENST00000487188 TCP10LQ8TDR4 215 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 GDPD5Q8WTR4 605 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 VTI1AQ96AJ9 217 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 CLPTM1LQ96KA5 538 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 AGBL1Q96MI9 1066 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 RUSC1Q9BVN2 902 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 WWP1Q9H0M0 922 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 RABGAP1Q9Y3P9 1069 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 FRMPD4Q14CM0 1322 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 MYO3BQ8WXR4 1341 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 C15orf38-AP3S2A0A0A6YYH1 394 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 CCDC195A0A1B0GUA6 201 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 A0A1W2PPM1 405 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 RSPH10B2B2RC85 870 aa6.57□□□□□ -1.36
VPS13D-209ENST00000487188 STK10O94804 968 aaKnown RBP6.57□□□□□ -1.36
VPS13D-209ENST00000487188 RSPH10BP0C881 870 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms