RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 DDX39AO00148 427 aaKnown RBP5.96□□□□□ -1.46
SF1-217ENST00000486960 DAPK3O43293 454 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 THAP12O43422 761 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 EFCAB14O75071 495 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 RTN2O75298 545 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 ENDOD1O94919 500 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 PAHP00439 452 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 PSAPP07602 524 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 CKMT1AP12532 417 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 ARF4P18085 180 aaPredicted RBP5.96□□□□□ -1.46
SF1-217ENST00000486960 PSMA4P25789 261 aaKnown RBP5.96□□□□□ -1.46
SF1-217ENST00000486960 PEX2P28328 305 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 PIK3CBP42338 1070 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 CENPAP49450 140 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 KIF11P52732 1056 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 SMTNP53814 917 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 CACNB3P54284 484 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 NRG1Q02297 640 aaPredicted RBP5.96□□□□□ -1.46
SF1-217ENST00000486960 SP140Q13342 867 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 LRP8Q14114 963 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 PLS1Q14651 629 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 SMAD1Q15797 465 aaKnown RBP5.96□□□□□ -1.46
SF1-217ENST00000486960 IMMTQ16891 758 aaKnown RBP5.96□□□□□ -1.46
SF1-217ENST00000486960 PREPLQ4J6C6 727 aaPredicted RBP5.96□□□□□ -1.46
SF1-217ENST00000486960 FAM209BQ5JX69 171 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 SPDYCQ5MJ68 293 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 YOD1Q5VVQ6 348 aaPredicted RBP5.96□□□□□ -1.46
SF1-217ENST00000486960 TTBK2Q6IQ55 1244 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 SHQ1Q6PI26 577 aaKnown RBP5.96□□□□□ -1.46
SF1-217ENST00000486960 ELMSAN1Q6PJG2 1045 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 APOA5Q6Q788 366 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 LBX2Q6XYB7 198 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 OVCH2Q7RTZ1 564 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 LRRTM4Q86VH4 590 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 CRACR2BQ8N4Y2 399 aaPredicted RBP5.96□□□□□ -1.46
SF1-217ENST00000486960 DENND6BQ8NEG7 585 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 SLC7A14Q8TBB6 771 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 ADAMTS15Q8TE58 950 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 KCTD12Q96CX2 325 aaKnown RBP5.96□□□□□ -1.46
SF1-217ENST00000486960 RRP36Q96EU6 259 aaKnown RBP5.96□□□□□ -1.46
SF1-217ENST00000486960 PPP1R9BQ96SB3 815 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 HNRNPABQ99729 332 aaKnown RBP5.96□□□□□ -1.46
SF1-217ENST00000486960 TM9SF2Q99805 663 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 AARSD1Q9BTE6 412 aaKnown RBP5.96□□□□□ -1.46
SF1-217ENST00000486960 TTPALQ9BTX7 342 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 CEP44Q9C0F1 390 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 TMEM60Q9H2L4 133 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 BHMT2Q9H2M3 363 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 TBCCD1Q9NVR7 557 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 EXTL2Q9UBQ6 330 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 GRHPRQ9UBQ7 328 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 SEPT9Q9UHD8 586 aaPredicted RBP5.96□□□□□ -1.46
SF1-217ENST00000486960 PADI4Q9UM07 663 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 SIK3Q9Y2K2 1263 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 JRKLQ9Y4A0 524 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 FREM2Q5SZK8 3169 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 A0A0G2JPF8 293 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 A0A1W2PQU0 124 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 LACTBL1A8MY62 500 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 B4E1Z4 1266 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 HNRNPCL3B7ZW38 293 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 FFAR2O15552 330 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 MYO1BO43795 1136 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 CEP104O60308 925 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 NOL3O60936 208 aaKnown RBP5.95□□□□□ -1.46
SF1-217ENST00000486960 SOAT2O75908 522 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 FKBP9O95302 570 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 SLU7O95391 586 aaKnown RBP5.95□□□□□ -1.46
SF1-217ENST00000486960 ADRB2P07550 413 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 CFHP08603 1231 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 HNRNPCL4P0DMR1 293 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 HARSP12081 509 aaKnown RBP5.95□□□□□ -1.46
SF1-217ENST00000486960 HOXD13P35453 343 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 IFNAR2P48551 515 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 NR1H2P55055 460 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 WNT7BP56706 349 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 RPS26P62854 115 aaKnown RBP5.95□□□□□ -1.46
SF1-217ENST00000486960 CYP4A11Q02928 519 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 DEUP1Q05D60 604 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 GALNT1Q10472 559 aaPredicted RBP5.95□□□□□ -1.46
SF1-217ENST00000486960 BFSP1Q12934 665 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 SNAPC2Q13487 334 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 AUHQ13825 339 aaKnown RBP5.95□□□□□ -1.46
SF1-217ENST00000486960 NAA25Q14CX7 972 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 CNGA3Q16281 694 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 RTN1Q16799 776 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 HSF5Q4G112 596 aaPredicted RBP5.95□□□□□ -1.46
SF1-217ENST00000486960 DCAF17Q5H9S7 520 aaPredicted RBP5.95□□□□□ -1.46
SF1-217ENST00000486960 KRBOX4Q5JUW0 171 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 ATAT1Q5SQI0 421 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 UBXN11Q5T124 520 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 SWT1Q5T5J6 900 aaKnown RBP5.95□□□□□ -1.46
SF1-217ENST00000486960 RNF220Q5VTB9 566 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 CEP135Q66GS9 1140 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 IL27RAQ6UWB1 636 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 ZNF783Q6ZMS7 281 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 LRRC69Q6ZNQ3 347 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 FKBP9P1Q75LS8 142 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 CCDC80Q76M96 950 aa5.95□□□□□ -1.46
SF1-217ENST00000486960 SH3BP5LQ7L8J4 393 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms