RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 RAB27AP51159 221 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 SCNN1GP51170 649 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 AFF1P51825 1210 aaKnown RBP6.11□□□□□ -1.43
COPS3-208ENST00000486032 RNASELQ05823 741 aaKnown RBP6.11□□□□□ -1.43
COPS3-208ENST00000486032 DCAF17Q5H9S7 520 aaPredicted RBP6.11□□□□□ -1.43
COPS3-208ENST00000486032 RASIP1Q5U651 963 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 TCERG1LQ5VWI1 586 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 CENPPQ6IPU0 288 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 LRSAM1Q6UWE0 723 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 AGMOQ6ZNB7 445 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 NPAS4Q8IUM7 802 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 FAM186BQ8IYM0 893 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 TDHQ8IZJ6 230 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 CSGALNACT2Q8N6G5 542 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 RNF214Q8ND24 703 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 GOLGA5Q8TBA6 731 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 URGCPQ8TCY9 931 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 HERVK_113Q902F9 699 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 RABGGTAQ92696 567 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 CCDC127Q96BQ5 260 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 FAM84AQ96KN4 292 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 FAM193BQ96PV7 902 aaPredicted RBP6.11□□□□□ -1.43
COPS3-208ENST00000486032 YME1L1Q96TA2 773 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 GAD1Q99259 594 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 DUSP9Q99956 384 aaKnown RBP6.11□□□□□ -1.43
COPS3-208ENST00000486032 NAT10Q9H0A0 1025 aaKnown RBP6.11□□□□□ -1.43
COPS3-208ENST00000486032 CXCL16Q9H2A7 254 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 TTYH1Q9H313 450 aaPredicted RBP6.11□□□□□ -1.43
COPS3-208ENST00000486032 TSPY26PQ9H489 355 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 PTPRHQ9HD43 1115 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 TMPRSS4Q9NRS4 437 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 TMEM161AQ9NX61 479 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 MIOSQ9NXC5 875 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 RBAKQ9NYW8 714 aaPredicted RBP6.11□□□□□ -1.43
COPS3-208ENST00000486032 MAGEC2Q9UBF1 373 aaPredicted RBP6.11□□□□□ -1.43
COPS3-208ENST00000486032 RWDD2AQ9UIY3 292 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 TRAF3IP3Q9Y228 551 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 FRMD4BQ9Y2L6 1034 aa6.11□□□□□ -1.43
COPS3-208ENST00000486032 SPTBN5Q9NRC6 3674 aaKnown RBP6.11□□□□□ -1.43
COPS3-208ENST00000486032 COL4A4P53420 1690 aaPredicted RBP6.1□□□□□ -1.43
COPS3-208ENST00000486032 CHD7Q9P2D1 2997 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 LCHNA4D1U4 455 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 EPOPA6NHQ4 379 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 SMTNL1A8MU46 457 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 PES1O00541 588 aaKnown RBP6.1□□□□□ -1.43
COPS3-208ENST00000486032 OFD1O75665 1012 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 AKAP3O75969 853 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 FGFR1OPO95684 399 aaKnown RBP6.1□□□□□ -1.43
COPS3-208ENST00000486032 EOMESO95936 686 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 ADRB2P07550 413 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 CLTAP09496 248 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 TRIM49P0CI25 452 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 TRIM49CP0CI26 452 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 KRT13P13646 458 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 CDK11BP21127 795 aaKnown RBP6.1□□□□□ -1.43
COPS3-208ENST00000486032 ERCC5P28715 1186 aaPredicted RBP6.1□□□□□ -1.43
COPS3-208ENST00000486032 SSTR3P32745 418 aaPredicted RBP6.1□□□□□ -1.43
COPS3-208ENST00000486032 PSMC2P35998 433 aaKnown RBP6.1□□□□□ -1.43
COPS3-208ENST00000486032 MTIF2P46199 727 aaKnown RBP6.1□□□□□ -1.43
COPS3-208ENST00000486032 ZNF165P49910 485 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 GUCY2FP51841 1108 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 FAM189BP81408 668 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 TFAMQ00059 246 aaKnown RBP6.1□□□□□ -1.43
COPS3-208ENST00000486032 FKBP3Q00688 224 aaKnown RBP6.1□□□□□ -1.43
COPS3-208ENST00000486032 PLCB2Q00722 1185 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 LRRC63Q05C16 580 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 PPP2R3AQ06190 1150 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 BTG3Q14201 252 aaPredicted RBP6.1□□□□□ -1.43
COPS3-208ENST00000486032 ENOX2Q16206 610 aaKnown RBP6.1□□□□□ -1.43
COPS3-208ENST00000486032 SNRNP35Q16560 246 aaKnown RBP6.1□□□□□ -1.43
COPS3-208ENST00000486032 EDRF1Q3B7T1 1238 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 SLC10A6Q3KNW5 377 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 ZCWPW2Q504Y3 356 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 COBLL1Q53SF7 1204 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 TTI2Q6NXR4 508 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 GLB1LQ6UWU2 654 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 CRELD2Q6UXH1 353 aaPredicted RBP6.1□□□□□ -1.43
COPS3-208ENST00000486032 MRPL10Q7Z7H8 261 aaKnown RBP6.1□□□□□ -1.43
COPS3-208ENST00000486032 LUZP1Q86V48 1076 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 HERC6Q8IVU3 1022 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 TMEM130Q8N3G9 435 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 TOP1MTQ969P6 601 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 GUCD1Q96NT3 240 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 FNBP1Q96RU3 617 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 SLC9A7Q96T83 725 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 POP1Q99575 1024 aaKnown RBP6.1□□□□□ -1.43
COPS3-208ENST00000486032 FUCA2Q9BTY2 467 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 CBX8Q9HC52 389 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 KIAA1586Q9HCI6 787 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 PDE11AQ9HCR9 933 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.1□□□□□ -1.43
COPS3-208ENST00000486032 TOPORSQ9NS56 1045 aaPredicted RBP6.1□□□□□ -1.43
COPS3-208ENST00000486032 SAMSN1Q9NSI8 373 aaKnown RBP6.1□□□□□ -1.43
COPS3-208ENST00000486032 CGNQ9P2M7 1197 aaKnown RBP6.1□□□□□ -1.43
COPS3-208ENST00000486032 CACNG4Q9UBN1 327 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 CPSF3Q9UKF6 684 aaKnown RBP6.1□□□□□ -1.43
COPS3-208ENST00000486032 GIT1Q9Y2X7 761 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 NFE2L3Q9Y4A8 694 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 STYXL1Q9Y6J8 313 aa6.1□□□□□ -1.43
COPS3-208ENST00000486032 REV3LO60673 3130 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms