RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 CCDC192P0DO97 292 aa25.47■■□□□ 1.67
ABCF3-216ENST00000485921 TKTP29401 623 aaKnown RBP25.47■■□□□ 1.67
ABCF3-216ENST00000485921 GCLMP48507 274 aa25.47■■□□□ 1.67
ABCF3-216ENST00000485921 TRPC3Q13507 836 aa25.47■■□□□ 1.67
ABCF3-216ENST00000485921 SV2CQ496J9 727 aa25.47■■□□□ 1.67
ABCF3-216ENST00000485921 DCAF17Q5H9S7 520 aaPredicted RBP25.47■■□□□ 1.67
ABCF3-216ENST00000485921 RTP2Q5QGT7 225 aa25.47■■□□□ 1.67
ABCF3-216ENST00000485921 TCERG1LQ5VWI1 586 aa25.47■■□□□ 1.67
ABCF3-216ENST00000485921 SV2AQ7L0J3 742 aa25.47■■□□□ 1.67
ABCF3-216ENST00000485921 RIN2Q8WYP3 895 aaPredicted RBP25.47■■□□□ 1.67
ABCF3-216ENST00000485921 SENP8Q96LD8 212 aa25.47■■□□□ 1.67
ABCF3-216ENST00000485921 MMRN2Q9H8L6 949 aa25.47■■□□□ 1.67
ABCF3-216ENST00000485921 PCDHB8Q9UN66 801 aa25.47■■□□□ 1.67
ABCF3-216ENST00000485921 IRAK3Q9Y616 596 aa25.47■■□□□ 1.67
ABCF3-216ENST00000485921 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.46■■□□□ 1.67
ABCF3-216ENST00000485921 KPNA7A9QM74 516 aa25.46■■□□□ 1.67
ABCF3-216ENST00000485921 M0QZQ0 153 aa25.46■■□□□ 1.67
ABCF3-216ENST00000485921 SYN3O14994 580 aa25.46■■□□□ 1.67
ABCF3-216ENST00000485921 STX10O60499 249 aa25.46■■□□□ 1.67
ABCF3-216ENST00000485921 LILRB3O75022 631 aa25.46■■□□□ 1.67
ABCF3-216ENST00000485921 GTF2H1P32780 548 aa25.46■■□□□ 1.67
ABCF3-216ENST00000485921 MYO1EQ12965 1108 aa25.46■■□□□ 1.67
ABCF3-216ENST00000485921 ZSCAN23Q3MJ62 389 aa25.46■■□□□ 1.67
ABCF3-216ENST00000485921 ZACNQ401N2 412 aa25.46■■□□□ 1.67
ABCF3-216ENST00000485921 TCEAL5Q5H9L2 206 aa25.46■■□□□ 1.67
ABCF3-216ENST00000485921 C15orf39Q6ZRI6 1047 aa25.46■■□□□ 1.67
ABCF3-216ENST00000485921 ADGRD2Q7Z7M1 963 aa25.46■■□□□ 1.67
ABCF3-216ENST00000485921 ENOX1Q8TC92 643 aaKnown RBP25.46■■□□□ 1.67
ABCF3-216ENST00000485921 HPDLQ96IR7 371 aa25.46■■□□□ 1.67
ABCF3-216ENST00000485921 SCN1AP35498 2009 aa25.46■■□□□ 1.67
ABCF3-216ENST00000485921 MARSP56192 900 aaKnown RBP25.45■■□□□ 1.66
ABCF3-216ENST00000485921 GPR65Q8IYL9 337 aa25.45■■□□□ 1.66
ABCF3-216ENST00000485921 PPP2R3CQ969Q6 453 aa25.45■■□□□ 1.66
ABCF3-216ENST00000485921 FUCA2Q9BTY2 467 aa25.45■■□□□ 1.66
ABCF3-216ENST00000485921 THAP9Q9H5L6 903 aa25.45■■□□□ 1.66
ABCF3-216ENST00000485921 TLE6Q9H808 572 aa25.45■■□□□ 1.66
ABCF3-216ENST00000485921 TMEM8AQ9HCN3 771 aa25.45■■□□□ 1.66
ABCF3-216ENST00000485921 CYB561D2O14569 222 aa25.44■■□□□ 1.66
ABCF3-216ENST00000485921 VNN1O95497 513 aa25.44■■□□□ 1.66
ABCF3-216ENST00000485921 MYL6P60660 151 aa25.44■■□□□ 1.66
ABCF3-216ENST00000485921 NCOA4Q13772 614 aa25.44■■□□□ 1.66
ABCF3-216ENST00000485921 CCDC85BQ15834 202 aaPredicted RBP25.44■■□□□ 1.66
ABCF3-216ENST00000485921 ANO6Q4KMQ2 910 aa25.44■■□□□ 1.66
ABCF3-216ENST00000485921 PDXDC1Q6P996 788 aa25.44■■□□□ 1.66
ABCF3-216ENST00000485921 PRSS55Q6UWB4 352 aaPredicted RBP25.44■■□□□ 1.66
ABCF3-216ENST00000485921 RBM23Q86U06 439 aaKnown RBP25.44■■□□□ 1.66
ABCF3-216ENST00000485921 IRF2BP1Q8IU81 584 aa25.44■■□□□ 1.66
ABCF3-216ENST00000485921 CREBRFQ8IUR6 639 aa25.44■■□□□ 1.66
ABCF3-216ENST00000485921 APPL2Q8NEU8 664 aa25.44■■□□□ 1.66
ABCF3-216ENST00000485921 LNX1Q8TBB1 728 aaPredicted RBP25.44■■□□□ 1.66
ABCF3-216ENST00000485921 PIK3R5Q8WYR1 880 aa25.44■■□□□ 1.66
ABCF3-216ENST00000485921 SLC35C1Q96A29 364 aa25.44■■□□□ 1.66
ABCF3-216ENST00000485921 CNOT6LQ96LI5 555 aaKnown RBP25.44■■□□□ 1.66
ABCF3-216ENST00000485921 STXBP5LQ9Y2K9 1186 aa25.44■■□□□ 1.66
ABCF3-216ENST00000485921 TIMM13Q9Y5L4 95 aaPredicted RBP25.44■■□□□ 1.66
ABCF3-216ENST00000485921 ATG2AQ2TAZ0 1938 aa25.43■■□□□ 1.66
ABCF3-216ENST00000485921 ODC1P11926 461 aa25.43■■□□□ 1.66
ABCF3-216ENST00000485921 VARS2Q5ST30 1063 aaKnown RBP25.43■■□□□ 1.66
ABCF3-216ENST00000485921 KRT39Q6A163 491 aa25.43■■□□□ 1.66
ABCF3-216ENST00000485921 TRIM59Q8IWR1 403 aa25.43■■□□□ 1.66
ABCF3-216ENST00000485921 EMILIN2Q9BXX0 1053 aa25.43■■□□□ 1.66
ABCF3-216ENST00000485921 NAT10Q9H0A0 1025 aaKnown RBP25.43■■□□□ 1.66
ABCF3-216ENST00000485921 RXFP1Q9HBX9 757 aa25.43■■□□□ 1.66
ABCF3-216ENST00000485921 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.43■■□□□ 1.66
ABCF3-216ENST00000485921 NFE2L3Q9Y4A8 694 aa25.43■■□□□ 1.66
ABCF3-216ENST00000485921 ARHGEF37A1IGU5 675 aa25.42■■□□□ 1.66
ABCF3-216ENST00000485921 PER2O15055 1255 aa25.42■■□□□ 1.66
ABCF3-216ENST00000485921 HLA-DRAP01903 254 aa25.42■■□□□ 1.66
ABCF3-216ENST00000485921 CNPP09543 421 aaKnown RBP25.42■■□□□ 1.66
ABCF3-216ENST00000485921 TYMPP19971 482 aa25.42■■□□□ 1.66
ABCF3-216ENST00000485921 ATICP31939 592 aa25.42■■□□□ 1.66
ABCF3-216ENST00000485921 NRIP1P48552 1158 aa25.42■■□□□ 1.66
ABCF3-216ENST00000485921 MXI1P50539 228 aa25.42■■□□□ 1.66
ABCF3-216ENST00000485921 PSMD5Q16401 504 aa25.42■■□□□ 1.66
ABCF3-216ENST00000485921 ANKS3Q6ZW76 656 aa25.42■■□□□ 1.66
ABCF3-216ENST00000485921 FAM114A1Q8IWE2 563 aa25.42■■□□□ 1.66
ABCF3-216ENST00000485921 PPM1EQ8WY54 764 aa25.42■■□□□ 1.66
ABCF3-216ENST00000485921 KLHL5Q96PQ7 755 aa25.42■■□□□ 1.66
ABCF3-216ENST00000485921 GDAP2Q9NXN4 497 aa25.42■■□□□ 1.66
ABCF3-216ENST00000485921 SNX9Q9Y5X1 595 aa25.42■■□□□ 1.66
ABCF3-216ENST00000485921 VWA8A3KMH1 1905 aa25.41■■□□□ 1.66
ABCF3-216ENST00000485921 STAU1O95793 577 aaKnown RBP25.41■■□□□ 1.66
ABCF3-216ENST00000485921 RPL17P18621 184 aaKnown RBP25.41■■□□□ 1.66
ABCF3-216ENST00000485921 PIK3CAP42336 1068 aa25.41■■□□□ 1.66
ABCF3-216ENST00000485921 CREMQ03060 361 aa25.41■■□□□ 1.66
ABCF3-216ENST00000485921 HYAL1Q12794 435 aa25.41■■□□□ 1.66
ABCF3-216ENST00000485921 MRPL58Q14197 206 aaKnown RBP25.41■■□□□ 1.66
ABCF3-216ENST00000485921 DUSP6Q16828 381 aa25.41■■□□□ 1.66
ABCF3-216ENST00000485921 TAS1R2Q8TE23 839 aa25.41■■□□□ 1.66
ABCF3-216ENST00000485921 XYLT2Q9H1B5 865 aa25.41■■□□□ 1.66
ABCF3-216ENST00000485921 IGFLR1Q9H665 355 aa25.41■■□□□ 1.66
ABCF3-216ENST00000485921 SAMSN1Q9NSI8 373 aaKnown RBP25.41■■□□□ 1.66
ABCF3-216ENST00000485921 FNIP2Q9P278 1114 aa25.41■■□□□ 1.66
ABCF3-216ENST00000485921 MAGEC2Q9UBF1 373 aaPredicted RBP25.41■■□□□ 1.66
ABCF3-216ENST00000485921 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.41■■□□□ 1.66
ABCF3-216ENST00000485921 TEX28O15482 410 aa25.4■■□□□ 1.66
ABCF3-216ENST00000485921 CYP11A1P05108 521 aa25.4■■□□□ 1.66
ABCF3-216ENST00000485921 GTF2F1P35269 517 aaKnown RBP eCLIP25.4■■□□□ 1.66
ABCF3-216ENST00000485921 MYL5Q02045 173 aa25.4■■□□□ 1.66
ABCF3-216ENST00000485921 YWHAHQ04917 246 aaPredicted RBP25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms