RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 LRFN2Q9ULH4 789 aa21.94■■□□□ 1.1
VCPKMT-203ENST00000484763 BZW2Q9Y6E2 419 aaKnown RBP21.94■■□□□ 1.1
VCPKMT-203ENST00000484763 PPEF2O14830 753 aa21.93■■□□□ 1.1
VCPKMT-203ENST00000484763 POMCP01189 267 aa21.93■■□□□ 1.1
VCPKMT-203ENST00000484763 PFKMP08237 780 aa21.93■■□□□ 1.1
VCPKMT-203ENST00000484763 CSF2RAP15509 400 aa21.93■■□□□ 1.1
VCPKMT-203ENST00000484763 USP8P40818 1118 aa21.93■■□□□ 1.1
VCPKMT-203ENST00000484763 KCNJ6P48051 423 aa21.93■■□□□ 1.1
VCPKMT-203ENST00000484763 SCARA5Q6ZMJ2 495 aa21.93■■□□□ 1.1
VCPKMT-203ENST00000484763 URGCPQ8TCY9 931 aa21.93■■□□□ 1.1
VCPKMT-203ENST00000484763 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.93■■□□□ 1.1
VCPKMT-203ENST00000484763 POLIQ9UNA4 740 aa21.93■■□□□ 1.1
VCPKMT-203ENST00000484763 SSU72P8A0A1W2PR75 194 aa21.92■■□□□ 1.1
VCPKMT-203ENST00000484763 PLEKP08567 350 aaPredicted RBP21.92■■□□□ 1.1
VCPKMT-203ENST00000484763 FGFR1P11362 822 aa21.92■■□□□ 1.1
VCPKMT-203ENST00000484763 YWHAEP62258 255 aaKnown RBP21.92■■□□□ 1.1
VCPKMT-203ENST00000484763 TNNC1P63316 161 aa21.92■■□□□ 1.1
VCPKMT-203ENST00000484763 SMYD5Q6GMV2 418 aa21.92■■□□□ 1.1
VCPKMT-203ENST00000484763 RAD9BQ6WBX8 426 aa21.92■■□□□ 1.1
VCPKMT-203ENST00000484763 CCDC170Q8IYT3 715 aa21.92■■□□□ 1.1
VCPKMT-203ENST00000484763 RPUSD2Q8IZ73 545 aaKnown RBP21.92■■□□□ 1.1
VCPKMT-203ENST00000484763 BCO2Q9BYV7 579 aa21.92■■□□□ 1.1
VCPKMT-203ENST00000484763 HOXA2O43364 376 aa21.92■■□□□ 1.1
VCPKMT-203ENST00000484763 KRT5P13647 590 aa21.92■■□□□ 1.1
VCPKMT-203ENST00000484763 ACO1P21399 889 aaKnown RBP21.92■■□□□ 1.1
VCPKMT-203ENST00000484763 MAPK8IP2Q13387 824 aaPredicted RBP21.92■■□□□ 1.1
VCPKMT-203ENST00000484763 MTF1Q14872 753 aa21.92■■□□□ 1.1
VCPKMT-203ENST00000484763 NOMO2Q5JPE7 1267 aa21.92■■□□□ 1.1
VCPKMT-203ENST00000484763 UBR7Q8N806 425 aa21.92■■□□□ 1.1
VCPKMT-203ENST00000484763 CCDC42Q96M95 316 aa21.92■■□□□ 1.1
VCPKMT-203ENST00000484763 DEF6Q9H4E7 631 aa21.92■■□□□ 1.1
VCPKMT-203ENST00000484763 HAUS4Q9H6D7 363 aa21.92■■□□□ 1.1
VCPKMT-203ENST00000484763 RPL9P32969 192 aaKnown RBP21.91■■□□□ 1.1
VCPKMT-203ENST00000484763 CYLC1P35663 651 aaPredicted RBP21.91■■□□□ 1.1
VCPKMT-203ENST00000484763 TAF6P49848 677 aa21.91■■□□□ 1.1
VCPKMT-203ENST00000484763 TUSC3Q13454 348 aa21.91■■□□□ 1.1
VCPKMT-203ENST00000484763 SV2CQ496J9 727 aa21.91■■□□□ 1.1
VCPKMT-203ENST00000484763 NPAS4Q8IUM7 802 aa21.91■■□□□ 1.1
VCPKMT-203ENST00000484763 ABI1Q8IZP0 508 aa21.91■■□□□ 1.1
VCPKMT-203ENST00000484763 CRIPAKQ8N1N5 446 aa21.91■■□□□ 1.1
VCPKMT-203ENST00000484763 KANSL3Q9P2N6 904 aa21.91■■□□□ 1.1
VCPKMT-203ENST00000484763 ABHD14A-ACY1A0A1B0GW23 586 aa21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 EIF4A3P38919 411 aaKnown RBP21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 FAM124BQ9H5Z6 455 aaPredicted RBP21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 CYP3A43Q9HB55 503 aa21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 CISHQ9NSE2 258 aa21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 CNTN6Q9UQ52 1028 aa21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 PCDHB4Q9Y5E5 795 aa21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 PODXLO00592 558 aa21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 CYP26A1O43174 497 aa21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 WEE2P0C1S8 567 aa21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 CD58P19256 250 aa21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 MSNP26038 577 aaKnown RBP21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 CLCN1P35523 988 aa21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 PTK2Q05397 1052 aa21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 TMEM270Q6UE05 265 aa21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 KIAA1524Q8TCG1 905 aa21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 RSPH1Q8WYR4 309 aa21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 UROC1Q96N76 676 aa21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 SMYD3Q9H7B4 428 aa21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 SNX9Q9Y5X1 595 aa21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 EPN1Q9Y6I3 576 aaPredicted RBP21.9■■□□□ 1.1
VCPKMT-203ENST00000484763 CASTOR2A6NHX0 329 aa21.89■■□□□ 1.09
VCPKMT-203ENST00000484763 KPNA7A9QM74 516 aa21.89■■□□□ 1.09
VCPKMT-203ENST00000484763 EFCAB14O75071 495 aa21.89■■□□□ 1.09
VCPKMT-203ENST00000484763 NDUFA10O95299 355 aa21.89■■□□□ 1.09
VCPKMT-203ENST00000484763 CLCNKBP51801 687 aa21.89■■□□□ 1.09
VCPKMT-203ENST00000484763 KIF11P52732 1056 aa21.89■■□□□ 1.09
VCPKMT-203ENST00000484763 TOGARAM2Q6ZUX3 1019 aa21.89■■□□□ 1.09
VCPKMT-203ENST00000484763 C7orf61Q8IZ16 206 aa21.89■■□□□ 1.09
VCPKMT-203ENST00000484763 DDX27Q96GQ7 796 aaKnown RBP21.89■■□□□ 1.09
VCPKMT-203ENST00000484763 MMS19Q96T76 1030 aa21.89■■□□□ 1.09
VCPKMT-203ENST00000484763 HTATIP2Q9BUP3 242 aa21.89■■□□□ 1.09
VCPKMT-203ENST00000484763 TBC1D13Q9NVG8 400 aa21.89■■□□□ 1.09
VCPKMT-203ENST00000484763 AKR1B10O60218 316 aa21.88■■□□□ 1.09
VCPKMT-203ENST00000484763 ANXA13P27216 316 aa21.88■■□□□ 1.09
VCPKMT-203ENST00000484763 RAP1GAPP47736 663 aa21.88■■□□□ 1.09
VCPKMT-203ENST00000484763 PDE6CP51160 858 aa21.88■■□□□ 1.09
VCPKMT-203ENST00000484763 LILRA4P59901 499 aa21.88■■□□□ 1.09
VCPKMT-203ENST00000484763 UPP1Q16831 310 aa21.88■■□□□ 1.09
VCPKMT-203ENST00000484763 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.88■■□□□ 1.09
VCPKMT-203ENST00000484763 ZNF571Q7Z3V5 609 aaPredicted RBP21.88■■□□□ 1.09
VCPKMT-203ENST00000484763 VPS36Q86VN1 386 aa21.88■■□□□ 1.09
VCPKMT-203ENST00000484763 TTC39CQ8N584 583 aa21.88■■□□□ 1.09
VCPKMT-203ENST00000484763 RBBP8NLQ8NC74 664 aaPredicted RBP21.88■■□□□ 1.09
VCPKMT-203ENST00000484763 IL23AQ9NPF7 189 aa21.88■■□□□ 1.09
VCPKMT-203ENST00000484763 GDAP2Q9NXN4 497 aa21.88■■□□□ 1.09
VCPKMT-203ENST00000484763 CACNG4Q9UBN1 327 aa21.88■■□□□ 1.09
VCPKMT-203ENST00000484763 FNDC1Q4ZHG4 1894 aaPredicted RBP21.88■■□□□ 1.09
VCPKMT-203ENST00000484763 BPIFB4P59827 614 aa21.87■■□□□ 1.09
VCPKMT-203ENST00000484763 ASTE1Q2TB18 679 aaPredicted RBP21.87■■□□□ 1.09
VCPKMT-203ENST00000484763 SLC47A2Q86VL8 602 aa21.87■■□□□ 1.09
VCPKMT-203ENST00000484763 EPS8L1Q8TE68 723 aa21.87■■□□□ 1.09
VCPKMT-203ENST00000484763 ABHD8Q96I13 439 aa21.87■■□□□ 1.09
VCPKMT-203ENST00000484763 CASD1Q96PB1 797 aa21.87■■□□□ 1.09
VCPKMT-203ENST00000484763 SDCBP2Q9H190 292 aa21.87■■□□□ 1.09
VCPKMT-203ENST00000484763 EIF3CLB5ME19 914 aaKnown RBP21.87■■□□□ 1.09
VCPKMT-203ENST00000484763 SPTLC1O15269 473 aa21.87■■□□□ 1.09
VCPKMT-203ENST00000484763 BAIAP3O94812 1187 aa21.87■■□□□ 1.09
VCPKMT-203ENST00000484763 IPO7O95373 1038 aaKnown RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms