RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 TULP1O00294 542 aaPredicted RBP13.97□□□□□ -0.17
HDAC1-209ENST00000484305 IL18RAPO95256 599 aa13.97□□□□□ -0.17
HDAC1-209ENST00000484305 SEC24AO95486 1093 aa13.97□□□□□ -0.17
HDAC1-209ENST00000484305 LDHAP00338 332 aaKnown RBP13.97□□□□□ -0.17
HDAC1-209ENST00000484305 SLFN14P0C7P3 912 aa13.97□□□□□ -0.17
HDAC1-209ENST00000484305 PFKFB1P16118 471 aa13.97□□□□□ -0.17
HDAC1-209ENST00000484305 HOXA9P31269 272 aa13.97□□□□□ -0.17
HDAC1-209ENST00000484305 GBP2P32456 591 aaPredicted RBP13.97□□□□□ -0.17
HDAC1-209ENST00000484305 NTHL1P78549 312 aa13.97□□□□□ -0.17
HDAC1-209ENST00000484305 BECN1Q14457 450 aa13.97□□□□□ -0.17
HDAC1-209ENST00000484305 ZNF280DQ6N043 979 aa13.97□□□□□ -0.17
HDAC1-209ENST00000484305 ARMCX5Q6P1M9 558 aa13.97□□□□□ -0.17
HDAC1-209ENST00000484305 DSTYKQ6XUX3 929 aa13.97□□□□□ -0.17
HDAC1-209ENST00000484305 UNC13DQ70J99 1090 aa13.97□□□□□ -0.17
HDAC1-209ENST00000484305 GRASPQ7Z6J2 395 aaPredicted RBP13.97□□□□□ -0.17
HDAC1-209ENST00000484305 BRSK2Q8IWQ3 736 aa13.97□□□□□ -0.17
HDAC1-209ENST00000484305 CEP57L1Q8IYX8 460 aa13.97□□□□□ -0.17
HDAC1-209ENST00000484305 ZNF507Q8TCN5 953 aa13.97□□□□□ -0.17
HDAC1-209ENST00000484305 NOC3LQ8WTT2 800 aaKnown RBP13.97□□□□□ -0.17
HDAC1-209ENST00000484305 MYADMQ96S97 322 aa13.97□□□□□ -0.17
HDAC1-209ENST00000484305 PYM1Q9BRP8 204 aaKnown RBP13.97□□□□□ -0.17
HDAC1-209ENST00000484305 DPP3Q9NY33 737 aa13.97□□□□□ -0.17
HDAC1-209ENST00000484305 POLIQ9UNA4 740 aa13.97□□□□□ -0.17
HDAC1-209ENST00000484305 ATP6V1DQ9Y5K8 247 aa13.97□□□□□ -0.17
HDAC1-209ENST00000484305 PVALEFA0A1B0GWK0 134 aa13.96□□□□□ -0.17
HDAC1-209ENST00000484305 TMEM221A6NGB7 291 aa13.96□□□□□ -0.17
HDAC1-209ENST00000484305 M0R296 226 aa13.96□□□□□ -0.17
HDAC1-209ENST00000484305 EIF3DO15371 548 aaKnown RBP eCLIP13.96□□□□□ -0.17
HDAC1-209ENST00000484305 EXTL3O43909 919 aa13.96□□□□□ -0.17
HDAC1-209ENST00000484305 OAZ2O95190 189 aa13.96□□□□□ -0.17
HDAC1-209ENST00000484305 ATF2P15336 505 aa13.96□□□□□ -0.17
HDAC1-209ENST00000484305 YWHAHQ04917 246 aaPredicted RBP13.96□□□□□ -0.17
HDAC1-209ENST00000484305 SIGLEC14Q08ET2 396 aa13.96□□□□□ -0.17
HDAC1-209ENST00000484305 MTMR3Q13615 1198 aa13.96□□□□□ -0.17
HDAC1-209ENST00000484305 GET4Q7L5D6 327 aaPredicted RBP13.96□□□□□ -0.17
HDAC1-209ENST00000484305 GPD1LQ8N335 351 aa13.96□□□□□ -0.17
HDAC1-209ENST00000484305 ASIC4Q96FT7 647 aa13.96□□□□□ -0.17
HDAC1-209ENST00000484305 PAGE5Q96GU1 130 aa13.96□□□□□ -0.17
HDAC1-209ENST00000484305 FAM84AQ96KN4 292 aa13.96□□□□□ -0.17
HDAC1-209ENST00000484305 SENP8Q96LD8 212 aa13.96□□□□□ -0.17
HDAC1-209ENST00000484305 HCFC1R1Q9NWW0 138 aa13.96□□□□□ -0.17
HDAC1-209ENST00000484305 RBAKQ9NYW8 714 aaPredicted RBP13.96□□□□□ -0.17
HDAC1-209ENST00000484305 HPSEQ9Y251 543 aa13.96□□□□□ -0.17
HDAC1-209ENST00000484305 PRRG1O14668 218 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 TGFB1I1O43294 461 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 KLRC4O43908 158 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 XYLBO75191 536 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 TYMPP19971 482 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 FSHRP23945 695 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 ELF1P32519 619 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 TFAMQ00059 246 aaKnown RBP13.95□□□□□ -0.18
HDAC1-209ENST00000484305 TPGS2Q68CL5 300 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 SCARA3Q6AZY7 606 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 RNF19BQ6ZMZ0 732 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 RTL10Q7L3V2 364 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 USP37Q86T82 979 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 NT5DC4Q86YG4 428 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 NELFCDQ8IXH7 590 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 TCEAL8Q8IYN2 117 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 SCFD1Q8WVM8 642 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 RSAD2Q8WXG1 361 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 SCAND2PQ9GZW5 306 aaPredicted RBP13.95□□□□□ -0.18
HDAC1-209ENST00000484305 KCNK12Q9HB15 430 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 CYP4F11Q9HBI6 524 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 GDPD2Q9HCC8 539 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 PDE11AQ9HCR9 933 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 SLC39A2Q9NP94 309 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.95□□□□□ -0.18
HDAC1-209ENST00000484305 HSPBP1Q9NZL4 362 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 EPS15L1Q9UBC2 864 aa13.95□□□□□ -0.18
HDAC1-209ENST00000484305 DNMT3BQ9UBC3 853 aaKnown RBP13.95□□□□□ -0.18
HDAC1-209ENST00000484305 ARHGEF37A1IGU5 675 aa13.94□□□□□ -0.18
HDAC1-209ENST00000484305 VNN2O95498 520 aa13.94□□□□□ -0.18
HDAC1-209ENST00000484305 POU2F2P09086 479 aa13.94□□□□□ -0.18
HDAC1-209ENST00000484305 OR4Q2P0C623 313 aa13.94□□□□□ -0.18
HDAC1-209ENST00000484305 ODC1P11926 461 aa13.94□□□□□ -0.18
HDAC1-209ENST00000484305 LAMP2P13473 410 aa13.94□□□□□ -0.18
HDAC1-209ENST00000484305 CPB1P15086 417 aa13.94□□□□□ -0.18
HDAC1-209ENST00000484305 TAF6P49848 677 aa13.94□□□□□ -0.18
HDAC1-209ENST00000484305 NDUFA8P51970 172 aa13.94□□□□□ -0.18
HDAC1-209ENST00000484305 ADCY1Q08828 1119 aa13.94□□□□□ -0.18
HDAC1-209ENST00000484305 OVOS1Q6IE37 1185 aa13.94□□□□□ -0.18
HDAC1-209ENST00000484305 BMP8AQ7Z5Y6 402 aa13.94□□□□□ -0.18
HDAC1-209ENST00000484305 CBWD2Q8IUF1 395 aa13.94□□□□□ -0.18
HDAC1-209ENST00000484305 UBALD2Q8IYN6 164 aa13.94□□□□□ -0.18
HDAC1-209ENST00000484305 PBXIP1Q96AQ6 731 aa13.94□□□□□ -0.18
HDAC1-209ENST00000484305 BORCS6Q96GS4 357 aa13.94□□□□□ -0.18
HDAC1-209ENST00000484305 AGPAT3Q9NRZ7 376 aa13.94□□□□□ -0.18
HDAC1-209ENST00000484305 AFF4Q9UHB7 1163 aaKnown RBP13.94□□□□□ -0.18
HDAC1-209ENST00000484305 USP25Q9UHP3 1055 aa13.94□□□□□ -0.18
HDAC1-209ENST00000484305 ZNF318Q5VUA4 2279 aa13.94□□□□□ -0.18
HDAC1-209ENST00000484305 UBE4BO95155 1302 aa13.93□□□□□ -0.18
HDAC1-209ENST00000484305 FAM237AA0A1B0GTK4 181 aa13.93□□□□□ -0.18
HDAC1-209ENST00000484305 CYB561D2O14569 222 aa13.93□□□□□ -0.18
HDAC1-209ENST00000484305 KIAA0391O15091 583 aaKnown RBP13.93□□□□□ -0.18
HDAC1-209ENST00000484305 CLIC2O15247 247 aa13.93□□□□□ -0.18
HDAC1-209ENST00000484305 LRG1P02750 347 aa13.93□□□□□ -0.18
HDAC1-209ENST00000484305 ITGB3P05106 788 aa13.93□□□□□ -0.18
HDAC1-209ENST00000484305 PAX3P23760 479 aa13.93□□□□□ -0.18
HDAC1-209ENST00000484305 POLR2BP30876 1174 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms