RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 BEST2Q8NFU1 509 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 HPDLQ96IR7 371 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 PPP1R10Q96QC0 940 aaKnown RBP10.83□□□□□ -0.68
HDAC6-226ENST00000483656 PCDHB18PQ96TA0 734 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.83□□□□□ -0.68
HDAC6-226ENST00000483656 BCO2Q9BYV7 579 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 IRX2Q9BZI1 471 aaPredicted RBP10.83□□□□□ -0.68
HDAC6-226ENST00000483656 IMPG2Q9BZV3 1241 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 LZTFL1Q9NQ48 299 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 RGS18Q9NS28 235 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 NAGPAQ9UK23 515 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 UBQLN1Q9UMX0 589 aaKnown RBP10.83□□□□□ -0.68
HDAC6-226ENST00000483656 PCDHB4Q9Y5E5 795 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 GOLGA6L9A6NEM1 432 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 C9IYK1 514 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 PITPNM1O00562 1244 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 PIRO00625 290 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 TLR3O15455 904 aaKnown RBP10.82□□□□□ -0.68
HDAC6-226ENST00000483656 TNNT1P13805 278 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 CYP3A5P20815 502 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 TNFAIP3P21580 790 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 RAP1GAPP47736 663 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 RAB27AP51159 221 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 CDH8P55286 799 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 FAM189BP81408 668 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 FMO1Q01740 532 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 WDR72Q3MJ13 1102 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 ZNF667Q5HYK9 610 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 CCDC122Q5T0U0 273 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 TAF3Q5VWG9 929 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 TMEM270Q6UE05 265 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 SCARA5Q6ZMJ2 495 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 ECHDC2Q86YB7 292 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 RPUSD2Q8IZ73 545 aaKnown RBP10.82□□□□□ -0.68
HDAC6-226ENST00000483656 ANKLE1Q8NAG6 615 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 RBBP8NLQ8NC74 664 aaPredicted RBP10.82□□□□□ -0.68
HDAC6-226ENST00000483656 WHAMMQ8TF30 809 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 FAXDC2Q96IV6 333 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 TOX2Q96NM4 488 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 GAD1Q99259 594 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 PACSIN1Q9BY11 444 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 IFIH1Q9BYX4 1025 aaKnown RBP10.82□□□□□ -0.68
HDAC6-226ENST00000483656 WNT8AQ9H1J5 351 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 SMYD3Q9H7B4 428 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 GOLGA2P5Q9HBQ8 144 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 CISHQ9NSE2 258 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 TAS2R14Q9NYV8 317 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 NXF1Q9UBU9 619 aaKnown RBP10.82□□□□□ -0.68
HDAC6-226ENST00000483656 GIT1Q9Y2X7 761 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 DUSP10Q9Y6W6 482 aa10.82□□□□□ -0.68
HDAC6-226ENST00000483656 BRCA2P51587 3418 aa10.81□□□□□ -0.68
HDAC6-226ENST00000483656 ARL5CA6NH57 179 aa10.81□□□□□ -0.68
HDAC6-226ENST00000483656 SPTLC1O15269 473 aa10.81□□□□□ -0.68
HDAC6-226ENST00000483656 OFD1O75665 1012 aa10.81□□□□□ -0.68
HDAC6-226ENST00000483656 MMEP08473 750 aa10.81□□□□□ -0.68
HDAC6-226ENST00000483656 CFHP08603 1231 aa10.81□□□□□ -0.68
HDAC6-226ENST00000483656 CD58P19256 250 aa10.81□□□□□ -0.68
HDAC6-226ENST00000483656 IGFBP6P24592 240 aaPredicted RBP10.81□□□□□ -0.68
HDAC6-226ENST00000483656 LRPAP1P30533 357 aa10.81□□□□□ -0.68
HDAC6-226ENST00000483656 MLH1P40692 756 aa10.81□□□□□ -0.68
HDAC6-226ENST00000483656 ETF1P62495 437 aaKnown RBP10.81□□□□□ -0.68
HDAC6-226ENST00000483656 CDR2Q01850 454 aa10.81□□□□□ -0.68
HDAC6-226ENST00000483656 PLEKHG4Q58EX7 1191 aa10.81□□□□□ -0.68
HDAC6-226ENST00000483656 SMYD5Q6GMV2 418 aa10.81□□□□□ -0.68
HDAC6-226ENST00000483656 ALKBH5Q6P6C2 394 aaKnown RBP10.81□□□□□ -0.68
HDAC6-226ENST00000483656 KIAA1328Q86T90 577 aa10.81□□□□□ -0.68
HDAC6-226ENST00000483656 HACE1Q8IYU2 909 aa10.81□□□□□ -0.68
HDAC6-226ENST00000483656 LRRC52Q8N7C0 313 aa10.81□□□□□ -0.68
HDAC6-226ENST00000483656 VWCEQ96DN2 955 aa10.81□□□□□ -0.68
HDAC6-226ENST00000483656 PAWRQ96IZ0 340 aaKnown RBP10.81□□□□□ -0.68
HDAC6-226ENST00000483656 ZSWIM1Q9BR11 485 aa10.81□□□□□ -0.68
HDAC6-226ENST00000483656 CYP3A43Q9HB55 503 aa10.81□□□□□ -0.68
HDAC6-226ENST00000483656 SALL4Q9UJQ4 1053 aa10.81□□□□□ -0.68
HDAC6-226ENST00000483656 TBX21Q9UL17 535 aa10.81□□□□□ -0.68
HDAC6-226ENST00000483656 SCN1AP35498 2009 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 ENPP3O14638 875 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 INPPL1O15357 1258 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 XPOTO43592 962 aaKnown RBP10.8□□□□□ -0.68
HDAC6-226ENST00000483656 IPO7O95373 1038 aaKnown RBP10.8□□□□□ -0.68
HDAC6-226ENST00000483656 CXCL10P02778 98 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 SKIP12755 728 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 SCNN1GP51170 649 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 BPIFB4P59827 614 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 LRRC26Q2I0M4 334 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 ARHGAP29Q52LW3 1261 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 C10orf76Q5T2E6 689 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 SYT10Q6XYQ8 523 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 LIMS2Q7Z4I7 341 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 VPS36Q86VN1 386 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 DBF4BQ8NFT6 615 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 PGBD4Q96DM1 585 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 SCLYQ96I15 445 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 TWNKQ96RR1 684 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 WDR24Q96S15 920 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 ELOVL4Q9GZR5 314 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 ISCUQ9H1K1 167 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 TSPYL2Q9H2G4 693 aaPredicted RBP10.8□□□□□ -0.68
HDAC6-226ENST00000483656 HIPK3Q9H422 1215 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 C11orf49Q9H6J7 331 aa10.8□□□□□ -0.68
HDAC6-226ENST00000483656 RSAD1Q9HA92 442 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms