RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 SH2D3AQ9BRG2 576 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 TMEM175Q9BSA9 504 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 AGXT2Q9BYV1 514 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 ADAM19Q9H013 955 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 GBP3Q9H0R5 595 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 CLEC4MQ9H2X3 399 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-207ENST00000483407 MRPL17Q9NRX2 175 aaKnown RBP6.55□□□□□ -1.36
CSDE1-207ENST00000483407 AGPAT5Q9NUQ2 364 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 FRRS1LQ9P0K9 344 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 DDX25Q9UHL0 483 aaKnown RBP6.55□□□□□ -1.36
CSDE1-207ENST00000483407 DPP7Q9UHL4 492 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 SSX2IPQ9Y2D8 614 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 PPME1Q9Y570 386 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 PCDHB2Q9Y5E7 798 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 SNX14Q9Y5W7 946 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 ZDBF2Q9HCK1 2354 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 CNTNAP2Q9UHC6 1331 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 PLXNA4Q9HCM2 1894 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 TMEM150BA6NC51 233 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 EDIL3O43854 480 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 GAS2O43903 313 aaKnown RBP6.54□□□□□ -1.36
CSDE1-207ENST00000483407 MARCH6O60337 910 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 GREM1O60565 184 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 ERLIN2O94905 339 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 REC8O95072 547 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 STBD1O95210 358 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 URODP06132 367 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 CPB1P15086 417 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 GARTP22102 1010 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 PDIA3P30101 505 aaKnown RBP6.54□□□□□ -1.36
CSDE1-207ENST00000483407 ADH7P40394 386 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 NBL1P41271 181 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 QARSP47897 775 aaKnown RBP6.54□□□□□ -1.36
CSDE1-207ENST00000483407 SLC11A1P49279 550 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 GSK3AP49840 483 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 CLCN4P51793 760 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 EVCP57679 992 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 NCBP1Q09161 790 aaKnown RBP6.54□□□□□ -1.36
CSDE1-207ENST00000483407 TDGQ13569 410 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 NONOQ15233 471 aaKnown RBP eCLIP6.54□□□□□ -1.36
CSDE1-207ENST00000483407 PLA2G4FQ68DD2 849 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 FBXL19Q6PCT2 694 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 B3GNT9Q6UX72 402 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 ADAMTSL4Q6UY14 1074 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 ANO5Q75V66 913 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 SRGAP1Q7Z6B7 1085 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 KSR1Q8IVT5 923 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 DAGLBQ8NCG7 672 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 CNNM3Q8NE01 707 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 ETNPPLQ8TBG4 499 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 BCL7CQ8WUZ0 217 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-207ENST00000483407 TCP11Q8WWU5 503 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 TTC9Q92623 222 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 STAMQ92783 540 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 NKD2Q969F2 451 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-207ENST00000483407 EAF1Q96JC9 268 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-207ENST00000483407 SEC16BQ96JE7 1060 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 CEP170P1Q96L14 293 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 FAM20AQ96MK3 541 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 KLHL5Q96PQ7 755 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 CEP89Q96ST8 783 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 NT5C1AQ9BXI3 368 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 SLKQ9H2G2 1235 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-207ENST00000483407 SMOC2Q9H3U7 446 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 RSAD1Q9HA92 442 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 NCOA5Q9HCD5 579 aaKnown RBP6.54□□□□□ -1.36
CSDE1-207ENST00000483407 UBN1Q9NPG3 1134 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 IGSF9Q9P2J2 1179 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 DNAJB4Q9UDY4 337 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 NAGPAQ9UK23 515 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 FBXL21Q9UKT6 434 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 SOX13Q9UN79 622 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 TLR6Q9Y2C9 796 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 FAN1Q9Y2M0 1017 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 COL4A3BPQ9Y5P4 624 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 KIAA1671Q9BY89 1806 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 CFAP54Q96N23 3096 aa6.54□□□□□ -1.36
CSDE1-207ENST00000483407 FNDC1Q4ZHG4 1894 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-207ENST00000483407 CCDC194A0A1B0GVG4 234 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 PRR23AA6NEV1 266 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 MEIS3P2A8K0S8 358 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 H3BM21 787 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 ASAP2O43150 1006 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 PAGE1O75459 146 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 B3GALT4O96024 378 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 POMCP01189 267 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 PF4P02776 101 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 SOD2P04179 222 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 SSBP05455 408 aaKnown RBP eCLIP6.53□□□□□ -1.36
CSDE1-207ENST00000483407 CNPP09543 421 aaKnown RBP6.53□□□□□ -1.36
CSDE1-207ENST00000483407 SRGAP2CP0DJJ0 459 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 ITGA4P13612 1032 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 GCFC2P16383 781 aaKnown RBP6.53□□□□□ -1.36
CSDE1-207ENST00000483407 XBP1P17861 261 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 MAP2K3P46734 347 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 AK2P54819 239 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 NPEPPSP55786 919 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 LMNB2Q03252 620 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 PPP2R5CQ13362 524 aa6.53□□□□□ -1.36
CSDE1-207ENST00000483407 CAMK2GQ13555 558 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms