RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 SLC15A2Q16348 729 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 PCNX4Q63HM2 1172 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 ZNF713Q8N859 430 aaPredicted RBP12.49□□□□□ -0.41
VTI1A-205ENST00000483122 FBXO27Q8NI29 283 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 SKA1Q96BD8 255 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 DNAJC1Q96KC8 554 aaKnown RBP12.49□□□□□ -0.41
VTI1A-205ENST00000483122 TTC1Q99614 292 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 ARHGEF4Q9NR80 690 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 CHMP2BQ9UQN3 213 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 NEU2Q9Y3R4 380 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 A8MXQ7 604 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 OPHN1O60890 802 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 BAG2O95816 211 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 SPATA31C1P0DKV0 1188 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 RARBP10826 455 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 CRABP2P29373 138 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 ZBTB16Q05516 673 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 SYDE1Q6ZW31 735 aaPredicted RBP12.49□□□□□ -0.41
VTI1A-205ENST00000483122 ST13P4Q8IZP2 240 aaPredicted RBP12.49□□□□□ -0.41
VTI1A-205ENST00000483122 ZNF276Q8N554 614 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 FLAD1Q8NFF5 587 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 NEDD1Q8NHV4 660 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 LMO3Q8TAP4 145 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 MIPOL1Q8TD10 442 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 KAT5Q92993 513 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 LENG1Q96BZ8 264 aaPredicted RBP12.49□□□□□ -0.41
VTI1A-205ENST00000483122 CLPTM1LQ96KA5 538 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 TUBB6Q9BUF5 446 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 KCNK13Q9HB14 408 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.49□□□□□ -0.41
VTI1A-205ENST00000483122 IL1RAPL1Q9NZN1 696 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 DNM3Q9UQ16 869 aa12.49□□□□□ -0.41
VTI1A-205ENST00000483122 HARSP12081 509 aaKnown RBP12.48□□□□□ -0.41
VTI1A-205ENST00000483122 HIBADHP31937 336 aaKnown RBP12.48□□□□□ -0.41
VTI1A-205ENST00000483122 ARFIP2P53365 341 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 DBN1Q16643 649 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 TRAPPC3LQ5T215 181 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 OLFML2BQ68BL8 750 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 RAPH1Q70E73 1250 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 SATL1Q86VE3 508 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 LRRC6Q86X45 466 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 RELL1Q8IUW5 271 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 RDH13Q8NBN7 331 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 GRK7Q8WTQ7 553 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 CELF1Q92879 486 aaKnown RBP12.48□□□□□ -0.41
VTI1A-205ENST00000483122 PPP2R3CQ969Q6 453 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 ZNF653Q96CK0 615 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 CFAP57Q96MR6 1250 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 IWS1Q96ST2 819 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 TMEM120AQ9BXJ8 343 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 CLIC5Q9NZA1 410 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 ARMCX1Q9P291 453 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 PPM1HQ9ULR3 514 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 ZNF232Q9UNY5 417 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 NAV1Q8NEY1 1877 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 DESP17661 470 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 NT5C2P49902 561 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 RAP1GDS1P52306 607 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 CDK16Q00536 496 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 GRIK5Q16478 980 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.48□□□□□ -0.41
VTI1A-205ENST00000483122 RIPOR1Q6ZS17 1223 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 NOP9Q86U38 636 aaKnown RBP12.48□□□□□ -0.41
VTI1A-205ENST00000483122 TDRPQ86YL5 185 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 LRRC47Q8N1G4 583 aaKnown RBP12.48□□□□□ -0.41
VTI1A-205ENST00000483122 TTC25Q96NG3 672 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 PANX3Q96QZ0 392 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 HEMGNQ9BXL5 484 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 MIS12Q9H081 205 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 BHMT2Q9H2M3 363 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 GMEB1Q9Y692 573 aa12.48□□□□□ -0.41
VTI1A-205ENST00000483122 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.47□□□□□ -0.41
VTI1A-205ENST00000483122 USP17L15C9J2P7 530 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 USP17L13C9JLJ4 530 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 USP17L11C9JVI0 530 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 USP17L18D6R9N7 530 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 USP17L22D6RA61 530 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 USP17L17D6RBQ6 530 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 USP17L19D6RCP7 530 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 USP17L20D6RJB6 530 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 BUD23O43709 281 aaKnown RBP12.47□□□□□ -0.41
VTI1A-205ENST00000483122 TBCAO75347 108 aaKnown RBP12.47□□□□□ -0.41
VTI1A-205ENST00000483122 CYP1A2P05177 515 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 KRT4P19013 534 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 MAP3K10Q02779 954 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 CYP4A11Q02928 519 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 SPIRE1Q08AE8 756 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 USP17L24Q0WX57 530 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 CCDC62Q6P9F0 684 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 USP17L6PQ6QN14 398 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 TXNRD3Q86VQ6 643 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 NME8Q8N427 588 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 AGBL1Q96MI9 1066 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 TRIM55Q9BYV6 548 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 OSBPL8Q9BZF1 889 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 PHACTR1Q9C0D0 580 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 JMJD4Q9H9V9 463 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 NDE1Q9NXR1 346 aa12.47□□□□□ -0.41
VTI1A-205ENST00000483122 DDX60LQ5H9U9 1706 aaKnown RBP12.47□□□□□ -0.41
VTI1A-205ENST00000483122 RGL2O15211 777 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms