RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 KIAA0319LQ8IZA0 1049 aa15.43■□□□□ 0.06
CHD3-211ENST00000481999 PIK3R5Q8WYR1 880 aa15.43■□□□□ 0.06
CHD3-211ENST00000481999 FAM107BQ9H098 131 aa15.43■□□□□ 0.06
CHD3-211ENST00000481999 ABHD16BQ9H3Z7 469 aa15.43■□□□□ 0.06
CHD3-211ENST00000481999 POLIQ9UNA4 740 aa15.43■□□□□ 0.06
CHD3-211ENST00000481999 ANK1P16157 1881 aa15.42■□□□□ 0.06
CHD3-211ENST00000481999 KRIT1O00522 736 aa15.42■□□□□ 0.06
CHD3-211ENST00000481999 GAS2O43903 313 aaKnown RBP15.42■□□□□ 0.06
CHD3-211ENST00000481999 COMTP21964 271 aa15.42■□□□□ 0.06
CHD3-211ENST00000481999 RRM1P23921 792 aa15.42■□□□□ 0.06
CHD3-211ENST00000481999 TNFAIP2Q03169 654 aa15.42■□□□□ 0.06
CHD3-211ENST00000481999 HLTFQ14527 1009 aaKnown RBP eCLIP15.42■□□□□ 0.06
CHD3-211ENST00000481999 LINC01465Q8N7H1 131 aa15.42■□□□□ 0.06
CHD3-211ENST00000481999 ZSWIM1Q9BR11 485 aa15.42■□□□□ 0.06
CHD3-211ENST00000481999 NXF1Q9UBU9 619 aaKnown RBP15.42■□□□□ 0.06
CHD3-211ENST00000481999 SART1O43290 800 aaKnown RBP15.42■□□□□ 0.06
CHD3-211ENST00000481999 FGGP02679 453 aa15.42■□□□□ 0.06
CHD3-211ENST00000481999 UNGP13051 313 aaPredicted RBP15.42■□□□□ 0.06
CHD3-211ENST00000481999 ABCD1P33897 745 aa15.42■□□□□ 0.06
CHD3-211ENST00000481999 CDH8P55286 799 aa15.42■□□□□ 0.06
CHD3-211ENST00000481999 CORO7P57737 925 aa15.42■□□□□ 0.06
CHD3-211ENST00000481999 EMC10Q5UCC4 262 aa15.42■□□□□ 0.06
CHD3-211ENST00000481999 SAPCD2Q86UD0 394 aa15.42■□□□□ 0.06
CHD3-211ENST00000481999 RBBP8NLQ8NC74 664 aaPredicted RBP15.42■□□□□ 0.06
CHD3-211ENST00000481999 ZNF564Q8TBZ8 553 aaPredicted RBP15.42■□□□□ 0.06
CHD3-211ENST00000481999 SLITRK6Q9H5Y7 841 aa15.42■□□□□ 0.06
CHD3-211ENST00000481999 CNOT8Q9UFF9 292 aaKnown RBP15.42■□□□□ 0.06
CHD3-211ENST00000481999 TRPM7Q96QT4 1865 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 TRIP11Q15643 1979 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 O00370 1275 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 ASS1P00966 412 aaKnown RBP15.41■□□□□ 0.06
CHD3-211ENST00000481999 GNA15P30679 374 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 MAPK4P31152 587 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 TFDP1Q14186 410 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 CLEC16AQ2KHT3 1053 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 KDM7AQ6ZMT4 941 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 WDR49Q8IV35 697 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 BCAS4Q8TDM0 211 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 LRRC45Q96CN5 670 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 C11orf70Q9BRQ4 267 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 CELF4Q9BZC1 486 aaKnown RBP15.41■□□□□ 0.06
CHD3-211ENST00000481999 C2orf40Q9H1Z8 148 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 PDZD7Q9H5P4 517 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 ERVK-5Q9HDB9 667 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 HES2Q9Y543 173 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 UNCXA6NJT0 531 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 BHMG1C9JSJ3 638 aaPredicted RBP15.41■□□□□ 0.06
CHD3-211ENST00000481999 EBAG9O00559 213 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 KIAA0391O15091 583 aaKnown RBP15.41■□□□□ 0.06
CHD3-211ENST00000481999 ZC3H11AO75152 810 aaKnown RBP eCLIP15.41■□□□□ 0.06
CHD3-211ENST00000481999 TMEM191BP0C7N4 346 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 GZMAP12544 262 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 ZNF484Q5JVG2 852 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 KCTD16Q68DU8 428 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 LRIG3Q6UXM1 1119 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 ZNF467Q7Z7K2 595 aaPredicted RBP15.41■□□□□ 0.06
CHD3-211ENST00000481999 DDX42Q86XP3 938 aaKnown RBP eCLIP15.41■□□□□ 0.06
CHD3-211ENST00000481999 SH2D3CQ8N5H7 860 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 EMID1Q96A84 441 aaPredicted RBP15.41■□□□□ 0.06
CHD3-211ENST00000481999 PCDHB2Q9Y5E7 798 aa15.41■□□□□ 0.06
CHD3-211ENST00000481999 LACTBL1A8MY62 500 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 HMGB1P1B2RPK0 211 aaPredicted RBP15.4■□□□□ 0.06
CHD3-211ENST00000481999 THAP12O43422 761 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 STAG3L1P0CL83 205 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 BRD2P25440 801 aaKnown RBP15.4■□□□□ 0.06
CHD3-211ENST00000481999 ECHS1P30084 290 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 MAGEA9P43362 315 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 DGKDQ16760 1214 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 MORN1Q5T089 497 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 JADE1Q6IE81 842 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 ACAD10Q6JQN1 1059 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 MAATS1Q7Z4T9 603 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 CCDC26Q8TAB7 109 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 KAT2BQ92831 832 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 ATP6V1G3Q96LB4 118 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 RNPC3Q96LT9 517 aaKnown RBP15.4■□□□□ 0.06
CHD3-211ENST00000481999 ARHGAP39Q9C0H5 1083 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 XYLT2Q9H1B5 865 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 AMACRQ9UHK6 382 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 SIX4Q9UIU6 781 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 TTC7AQ9ULT0 858 aaPredicted RBP15.4■□□□□ 0.06
CHD3-211ENST00000481999 ZSWIM8A7E2V4 1837 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 TCRBV7S2A1N4TA0A589 114 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 GOLGA6L10A6NI86 522 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 PHKA2P46019 1235 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 CCT5P48643 541 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 DUOXA2Q1HG44 320 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 RUFY4Q6ZNE9 571 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 TLK2Q86UE8 772 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 RHOT2Q8IXI1 618 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 ZDHHC14Q8IZN3 488 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 C1orf127Q8N9H9 656 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 JPH2Q9BR39 696 aaPredicted RBP15.4■□□□□ 0.06
CHD3-211ENST00000481999 HMGXB4Q9UGU5 601 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 PLAAQ9Y263 795 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 TNFSF13BQ9Y275 285 aa15.4■□□□□ 0.06
CHD3-211ENST00000481999 LOC102724159A0A0B4J2E5 919 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 MAP2K5Q13163 448 aa15.39■□□□□ 0.05
CHD3-211ENST00000481999 PWP2Q15269 919 aaKnown RBP15.39■□□□□ 0.05
CHD3-211ENST00000481999 OSMRQ99650 979 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms