RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 DIS3LQ8TF46 1054 aaKnown RBP9.99□□□□□ -0.81
VEGFA-212ENST00000480614 THOC1Q96FV9 657 aaKnown RBP9.99□□□□□ -0.81
VEGFA-212ENST00000480614 CCSER1Q9C0I3 900 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 IMPAD1Q9NX62 359 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 VCAM1P19320 739 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 CCDC142Q17RM4 750 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 CLEC4FQ8N1N0 589 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 BTN2A2Q8WVV5 523 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 ARHGEF26Q96DR7 871 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 CYP4F11Q9HBI6 524 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 C6orf203Q9P0P8 240 aaPredicted RBP9.99□□□□□ -0.81
VEGFA-212ENST00000480614 APPL1Q9UKG1 709 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 PLEKHF1Q96S99 279 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 NFKBIL1Q9UBC1 381 aaPredicted RBP9.98□□□□□ -0.81
VEGFA-212ENST00000480614 SESN1Q9Y6P5 492 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 HES6Q96HZ4 224 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 CXorf56Q9H5V9 222 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 METP08581 1390 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 CNTN1Q12860 1018 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 TTLL9Q3SXZ7 439 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 SRLQ86TD4 932 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 ANKRD27Q96NW4 1050 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 APEX2Q9UBZ4 518 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 IER5Q5VY09 327 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 SDE2Q6IQ49 451 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 SPATA21Q7Z572 469 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 NUP93Q8N1F7 819 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 MRFAP1Q9Y605 127 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 COL15A1P39059 1388 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 HNRNPCP07910 306 aaKnown RBP eCLIP9.98□□□□□ -0.81
VEGFA-212ENST00000480614 TRIP4Q15650 581 aaPredicted RBP9.98□□□□□ -0.81
VEGFA-212ENST00000480614 ZNF394Q53GI3 561 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 OR6J1Q8NGC5 347 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 USP17L15C9J2P7 530 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 USP17L13C9JLJ4 530 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 USP17L11C9JVI0 530 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 USP17L18D6R9N7 530 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 USP17L22D6RA61 530 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 FAM47E-STBD1D6RA91 191 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 USP17L17D6RBQ6 530 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 USP17L19D6RCP7 530 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 USP17L20D6RJB6 530 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 TGM3Q08188 693 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 USP17L24Q0WX57 530 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 PDLIM2Q96JY6 352 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 TSEN34Q9BSV6 310 aaKnown RBP9.98□□□□□ -0.81
VEGFA-212ENST00000480614 MLXIPLQ9NP71 852 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 KLC4Q9NSK0 619 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 PRRG1O14668 218 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 ATP2C1P98194 919 aaPredicted RBP9.98□□□□□ -0.81
VEGFA-212ENST00000480614 ELOA2Q8IYF1 753 aaPredicted RBP9.98□□□□□ -0.81
VEGFA-212ENST00000480614 FRMD8P1Q9BZ68 369 aaPredicted RBP9.98□□□□□ -0.81
VEGFA-212ENST00000480614 ROPN1BQ9BZX4 212 aaPredicted RBP9.98□□□□□ -0.81
VEGFA-212ENST00000480614 ROPN1Q9HAT0 212 aaPredicted RBP9.98□□□□□ -0.81
VEGFA-212ENST00000480614 USP15Q9Y4E8 981 aaPredicted RBP9.98□□□□□ -0.81
VEGFA-212ENST00000480614 MYO1GB0I1T2 1018 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 RAB14P61106 215 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 AGBL2Q5U5Z8 902 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 GPSM2P81274 684 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 KLC1Q07866 573 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 KCNV2Q8TDN2 545 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 AGPAT1Q99943 283 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 VPS33BQ9H267 617 aa9.98□□□□□ -0.81
VEGFA-212ENST00000480614 PAPOLBQ9NRJ5 636 aaKnown RBP9.98□□□□□ -0.81
VEGFA-212ENST00000480614 SRP72O76094 671 aaKnown RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 CYLC2Q14093 348 aaPredicted RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 CACHD1Q5VU97 1274 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 ALDH8A1Q9H2A2 487 aaPredicted RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 EPC1Q9H2F5 836 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 RSAD1Q9HA92 442 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 AAASQ9NRG9 546 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 FBXL5Q9UKA1 691 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 RTTNQ86VV8 2226 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 EDRF1Q3B7T1 1238 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 CLEC17AQ6ZS10 378 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 PARK7Q99497 189 aaKnown RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 ITGB1BP2Q9UKP3 347 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 SSU72P8A0A1W2PR75 194 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 NUP62P37198 522 aaPredicted RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 CLK1P49759 484 aaKnown RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 PMS1P54277 932 aaKnown RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 SWSAP1Q6NVH7 229 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 C3orf20Q8ND61 904 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 SHCBP1Q8NEM2 672 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 SIK2Q9H0K1 926 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 USE1Q9NZ43 259 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 HSPBP1Q9NZL4 362 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 KIAA0100Q14667 2235 aaKnown RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 LRRIQ1Q96JM4 1722 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 PRKCBP05771 671 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 ITIH2P19823 946 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 PPP3CCP48454 512 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 KCNK10P57789 538 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 ASCC2Q9H1I8 757 aaPredicted RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 XPO7Q9UIA9 1087 aaKnown RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 ADCY3O60266 1144 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 ENO1P06733 434 aaKnown RBP9.97□□□□□ -0.81
VEGFA-212ENST00000480614 POLBP06746 335 aa9.97□□□□□ -0.81
VEGFA-212ENST00000480614 JAK1P23458 1154 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms