RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 ERVFC1P60507 584 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 PLCB3Q01970 1234 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 TCF15Q12870 199 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 BFSP1Q12934 665 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 HSP90AA2PQ14568 343 aaPredicted RBP13.21□□□□□ -0.29
TRA2B-212ENST00000480461 IQCB1Q15051 598 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 SURF1Q15526 300 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 CLUL1Q15846 466 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 DUOXA2Q1HG44 320 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 CTC1Q2NKJ3 1217 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 TDRD10Q5VZ19 366 aaKnown RBP13.21□□□□□ -0.29
TRA2B-212ENST00000480461 INTS8Q75QN2 995 aaKnown RBP13.21□□□□□ -0.29
TRA2B-212ENST00000480461 SV2AQ7L0J3 742 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 FRMD5Q7Z6J6 570 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 NT5DC4Q86YG4 428 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 DHX40Q8IX18 779 aaKnown RBP13.21□□□□□ -0.29
TRA2B-212ENST00000480461 RNF168Q8IYW5 571 aaPredicted RBP13.21□□□□□ -0.29
TRA2B-212ENST00000480461 B3GALT6Q96L58 329 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 COLEC11Q9BWP8 271 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 PLVAPQ9BX97 442 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 FANCLQ9NW38 375 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 DACH1Q9UI36 760 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 PCDHB12Q9Y5F1 795 aa13.21□□□□□ -0.29
TRA2B-212ENST00000480461 KMT2EQ8IZD2 1858 aa13.21□□□□□ -0.3
TRA2B-212ENST00000480461 IKBKBO14920 756 aa13.2□□□□□ -0.3
TRA2B-212ENST00000480461 MBTPS2O43462 519 aa13.2□□□□□ -0.3
TRA2B-212ENST00000480461 B3GAT3O94766 335 aa13.2□□□□□ -0.3
TRA2B-212ENST00000480461 ITGB3P05106 788 aa13.2□□□□□ -0.3
TRA2B-212ENST00000480461 EPB41P11171 864 aaKnown RBP13.2□□□□□ -0.3
TRA2B-212ENST00000480461 GCLMP48507 274 aa13.2□□□□□ -0.3
TRA2B-212ENST00000480461 LILRA4P59901 499 aa13.2□□□□□ -0.3
TRA2B-212ENST00000480461 DLX2Q07687 328 aaPredicted RBP13.2□□□□□ -0.3
TRA2B-212ENST00000480461 CDKAL1Q5VV42 579 aa13.2□□□□□ -0.3
TRA2B-212ENST00000480461 BMP8AQ7Z5Y6 402 aa13.2□□□□□ -0.3
TRA2B-212ENST00000480461 RNF135Q8IUD6 432 aa13.2□□□□□ -0.3
TRA2B-212ENST00000480461 TRIM59Q8IWR1 403 aa13.2□□□□□ -0.3
TRA2B-212ENST00000480461 BEST2Q8NFU1 509 aa13.2□□□□□ -0.3
TRA2B-212ENST00000480461 CACTINQ8WUQ7 758 aaKnown RBP13.2□□□□□ -0.3
TRA2B-212ENST00000480461 EDAQ92838 391 aa13.2□□□□□ -0.3
TRA2B-212ENST00000480461 SLC35C1Q96A29 364 aa13.2□□□□□ -0.3
TRA2B-212ENST00000480461 DDX27Q96GQ7 796 aaKnown RBP13.2□□□□□ -0.3
TRA2B-212ENST00000480461 UROC1Q96N76 676 aa13.2□□□□□ -0.3
TRA2B-212ENST00000480461 FNBP1Q96RU3 617 aa13.2□□□□□ -0.3
TRA2B-212ENST00000480461 AAASQ9NRG9 546 aa13.2□□□□□ -0.3
TRA2B-212ENST00000480461 ARMCX3Q9UH62 379 aaPredicted RBP13.2□□□□□ -0.3
TRA2B-212ENST00000480461 AGAP1Q9UPQ3 857 aa13.2□□□□□ -0.3
TRA2B-212ENST00000480461 NFE2L3Q9Y4A8 694 aa13.2□□□□□ -0.3
TRA2B-212ENST00000480461 PCDHGC5Q9Y5F6 944 aa13.2□□□□□ -0.3
TRA2B-212ENST00000480461 CITO14578 2027 aa13.19□□□□□ -0.3
TRA2B-212ENST00000480461 DMDP11532 3685 aa13.19□□□□□ -0.3
TRA2B-212ENST00000480461 TMEM189-UBE2V1I3L0A0 370 aa13.19□□□□□ -0.3
TRA2B-212ENST00000480461 TADA2AO75478 443 aa13.19□□□□□ -0.3
TRA2B-212ENST00000480461 POLR2BP30876 1174 aaKnown RBP13.19□□□□□ -0.3
TRA2B-212ENST00000480461 ZNF165P49910 485 aa13.19□□□□□ -0.3
TRA2B-212ENST00000480461 ENPEPQ07075 957 aa13.19□□□□□ -0.3
TRA2B-212ENST00000480461 HYAL1Q12794 435 aa13.19□□□□□ -0.3
TRA2B-212ENST00000480461 ZACNQ401N2 412 aa13.19□□□□□ -0.3
TRA2B-212ENST00000480461 CBWD6Q4V339 395 aa13.19□□□□□ -0.3
TRA2B-212ENST00000480461 CBWD3Q5JTY5 395 aa13.19□□□□□ -0.3
TRA2B-212ENST00000480461 CBWD5Q5RIA9 395 aa13.19□□□□□ -0.3
TRA2B-212ENST00000480461 DDX53Q86TM3 631 aaKnown RBP13.19□□□□□ -0.3
TRA2B-212ENST00000480461 POF1BQ8WVV4 589 aa13.19□□□□□ -0.3
TRA2B-212ENST00000480461 SEMA4DQ92854 862 aa13.19□□□□□ -0.3
TRA2B-212ENST00000480461 BPIFA3Q9BQP9 254 aa13.19□□□□□ -0.3
TRA2B-212ENST00000480461 XYLT2Q9H1B5 865 aa13.19□□□□□ -0.3
TRA2B-212ENST00000480461 THAP9Q9H5L6 903 aa13.19□□□□□ -0.3
TRA2B-212ENST00000480461 CBX8Q9HC52 389 aa13.19□□□□□ -0.3
TRA2B-212ENST00000480461 CHST7Q9NS84 486 aa13.19□□□□□ -0.3
TRA2B-212ENST00000480461 ADAM28Q9UKQ2 775 aa13.19□□□□□ -0.3
TRA2B-212ENST00000480461 RWDD3Q9Y3V2 267 aa13.19□□□□□ -0.3
TRA2B-212ENST00000480461 CACNA1AO00555 2505 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 KIAA1671Q9BY89 1806 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 ZFHX2Q9C0A1 2572 aaPredicted RBP13.18□□□□□ -0.3
TRA2B-212ENST00000480461 TMEM221A6NGB7 291 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 M0R296 226 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 NCK2O43639 380 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 GFRA3O60609 400 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 LILRB3O75022 631 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 TBX10O75333 385 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 TMEM191BP0C7N4 346 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 KRT13P13646 458 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 ZNF18P17022 549 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 AARSP49588 968 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRA2B-212ENST00000480461 MYL6P60660 151 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 RBP5P82980 135 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 SMAD4Q13485 552 aaKnown RBP13.18□□□□□ -0.3
TRA2B-212ENST00000480461 CCDC40Q4G0X9 1142 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 KIAA0319Q5VV43 1072 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 FUT10Q6P4F1 479 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 TRIM67Q6ZTA4 783 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 VPS52Q8N1B4 723 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 AOPEPQ8N6M6 819 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 TAS1R2Q8TE23 839 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 AUTS2Q8WXX7 1259 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 ANKRD36BP1Q96IX9 119 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 CNOT6LQ96LI5 555 aaKnown RBP13.18□□□□□ -0.3
TRA2B-212ENST00000480461 PRRX2Q99811 253 aa13.18□□□□□ -0.3
TRA2B-212ENST00000480461 C11orf84Q9BUA3 381 aaPredicted RBP13.18□□□□□ -0.3
TRA2B-212ENST00000480461 METTL14Q9HCE5 456 aaKnown RBP13.18□□□□□ -0.3
TRA2B-212ENST00000480461 ITGA11Q9UKX5 1188 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms