RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 A0A0C4DFX4 3053 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 ALPK3Q96L96 1907 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 ADGRA3Q8IWK6 1321 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 CNTNAP2Q9UHC6 1331 aa5.42□□□□□ -1.54
PTCD3-213ENST00000480102 KIAA1217Q5T5P2 1943 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 BAZ2BQ9UIF8 2168 aaKnown RBP5.41□□□□□ -1.54
PTCD3-213ENST00000480102 LPXNO60711 386 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 MED24O75448 989 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 YEATS4O95619 227 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 CA3P07451 260 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 CTSHP09668 335 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 ADH5P11766 374 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 DRD2P14416 443 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 PAX3P23760 479 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 MAP4P27816 1152 aaKnown RBP5.41□□□□□ -1.54
PTCD3-213ENST00000480102 HOXA11P31270 313 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-213ENST00000480102 BMPR1AP36894 532 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 TECP42680 631 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 ZNF131P52739 623 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 IGBP1P78318 339 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 DEFB103AP81534 67 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 SOX4Q06945 474 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-213ENST00000480102 LAMTOR4Q0VGL1 99 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 PTPAQ15257 358 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 PTPROQ16827 1216 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 KIZQ2M2Z5 673 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 TCTN1Q2MV58 587 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 MTERF2Q49AM1 385 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 TMEM119Q4V9L6 283 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 TIGD5Q53EQ6 642 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 RNF43Q68DV7 783 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 ALG1LQ6GMV1 187 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 NCAPH2Q6IBW4 605 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 NXPE4Q6UWF7 544 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.41□□□□□ -1.54
PTCD3-213ENST00000480102 APBB1IPQ7Z5R6 666 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-213ENST00000480102 HSCBQ8IWL3 235 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 TPH2Q8IWU9 490 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 LRRC43Q8N309 656 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 SYT2Q8N9I0 419 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-213ENST00000480102 C2CD4AQ8NCU7 369 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-213ENST00000480102 TMEM174Q8WUU8 243 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 TRAPPC12Q8WVT3 735 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 ATXN2LQ8WWM7 1075 aaKnown RBP5.41□□□□□ -1.54
PTCD3-213ENST00000480102 PGBD4Q96DM1 585 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 MRPL38Q96DV4 380 aaKnown RBP5.41□□□□□ -1.54
PTCD3-213ENST00000480102 YME1L1Q96TA2 773 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 MMTAG2Q9BU76 263 aaKnown RBP5.41□□□□□ -1.54
PTCD3-213ENST00000480102 RHOBTB2Q9BYZ6 727 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 FAM49AQ9H0Q0 323 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-213ENST00000480102 CUEDC2Q9H467 287 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 MAGEF1Q9HAY2 307 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 ZFP64Q9NPA5 681 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 PRMT7Q9NVM4 692 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-213ENST00000480102 ARHGAP28Q9P2N2 729 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 MTMR6Q9Y217 621 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 PCDHB6Q9Y5E3 794 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 VCANP13611 3396 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 XIRP2A4UGR9 3374 aa5.41□□□□□ -1.54
PTCD3-213ENST00000480102 DENND3A2RUS2 1198 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 ARHGEF35A5YM69 484 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 ACKR2O00590 384 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 SORBS3O60504 671 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 VTNP04004 478 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 LAG3P18627 525 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 NCLP19338 710 aaKnown RBP5.4□□□□□ -1.54
PTCD3-213ENST00000480102 GLRA2P23416 452 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 DDIT3P35638 169 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 CCT6AP40227 531 aaKnown RBP5.4□□□□□ -1.54
PTCD3-213ENST00000480102 CLCN3P51790 818 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 NPEPPSP55786 919 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 RESTQ13127 1097 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 GIT2Q14161 759 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 ZNF174Q15697 407 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 IL17AQ16552 155 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 KYAT1Q16773 422 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 AAK1Q2M2I8 961 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 XKR9Q5GH70 373 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 NOTUMQ6P988 496 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 ZPBP2Q6X784 338 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 TMEM184AQ6ZMB5 413 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 C1orf186Q6ZWK4 172 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 RTL10Q7L3V2 364 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 ECHDC2Q86YB7 292 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 ZDHHC13Q8IUH4 622 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 TMEM192Q8IY95 271 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 HACE1Q8IYU2 909 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 MYOCDQ8IZQ8 938 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 LRRC71Q8N4P6 559 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 FIBCD1Q8N539 461 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 RNF149Q8NC42 400 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 C3orf58Q8NDZ4 430 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 KCNG4Q8TDN1 519 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 GIPC2Q8TF65 315 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 CDCA3Q99618 268 aaPredicted RBP5.4□□□□□ -1.54
PTCD3-213ENST00000480102 ADAM2Q99965 735 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 TMEM175Q9BSA9 504 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 LRRC27Q9C0I9 530 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 CCDC113Q9H0I3 377 aa5.4□□□□□ -1.54
PTCD3-213ENST00000480102 CSRNP2Q9H175 543 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 208.4 ms