RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 ADCY1Q08828 1119 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 EXOC3L4Q17RC7 722 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 C2orf69Q8N8R5 385 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 RASGRP4Q8TDF6 673 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 DNAJC1Q96KC8 554 aaKnown RBP11.5□□□□□ -0.57
CHD6-208ENST00000480022 FNBP1Q96RU3 617 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 UNC45AQ9H3U1 944 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 EPB41L1Q9H4G0 881 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 CLIC5Q9NZA1 410 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 ZBTB21Q9ULJ3 1066 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 NENFQ9UMX5 172 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 IGKV6D-41A0A0C4DH26 115 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 A8MXQ7 604 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 SH3BP5O60239 455 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 EDF1O60869 148 aaKnown RBP11.5□□□□□ -0.57
CHD6-208ENST00000480022 HOXA7P31268 230 aaPredicted RBP11.5□□□□□ -0.57
CHD6-208ENST00000480022 MLH1P40692 756 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 VGLL4Q14135 290 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 NOL9Q5SY16 702 aaKnown RBP11.5□□□□□ -0.57
CHD6-208ENST00000480022 LDLRAD1Q5T700 205 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 TMEM179Q6ZVK1 233 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 CYFIP1Q7L576 1253 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 EPM2AIP1Q7L775 607 aaPredicted RBP11.5□□□□□ -0.57
CHD6-208ENST00000480022 NLRP9Q7RTR0 991 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 CLNKQ7Z7G1 428 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 SCYL3Q8IZE3 742 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 VPS52Q8N1B4 723 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 ANKRD35Q8N283 1001 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 PDCD7Q8N8D1 485 aaKnown RBP11.5□□□□□ -0.57
CHD6-208ENST00000480022 TUBB6Q9BUF5 446 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 IRF2BPLQ9H1B7 796 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 SLCO1B3Q9NPD5 702 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 PCDHA4Q9UN74 947 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 ACTL7BQ9Y614 415 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 ANKRD62A6NC57 917 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 FAM47DPA6NHR8 397 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 BCRP11274 1271 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 VARSP26640 1264 aaKnown RBP11.5□□□□□ -0.57
CHD6-208ENST00000480022 PRKCIP41743 596 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 CALCOCO2Q13137 446 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 PPP2R5CQ13362 524 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 THOC5Q13769 683 aaKnown RBP11.5□□□□□ -0.57
CHD6-208ENST00000480022 CTC1Q2NKJ3 1217 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 RGS9BPQ6ZS82 235 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 ACAD11Q709F0 780 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 DYMQ7RTS9 669 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 CLEC10AQ8IUN9 316 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 TRIM59Q8IWR1 403 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 CYP4X1Q8N118 509 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 MORC4Q8TE76 937 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 DGCR14Q96DF8 476 aaKnown RBP11.5□□□□□ -0.57
CHD6-208ENST00000480022 CALML4Q96GE6 196 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 LGALS13Q9UHV8 139 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 SNCAIPQ9Y6H5 919 aa11.5□□□□□ -0.57
CHD6-208ENST00000480022 MYMKA6NI61 221 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 C2CD2LO14523 706 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 ASNSP08243 561 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 ALAS1P13196 640 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 ALOX15P16050 662 aaPredicted RBP11.49□□□□□ -0.57
CHD6-208ENST00000480022 CRABP2P29373 138 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 PSMD7P51665 324 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 LRRC41Q15345 812 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 INF2Q27J81 1249 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 CCDC137Q6PK04 289 aaKnown RBP11.49□□□□□ -0.57
CHD6-208ENST00000480022 B3GNT6Q6ZMB0 384 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 MTDHQ86UE4 582 aaKnown RBP11.49□□□□□ -0.57
CHD6-208ENST00000480022 SATL1Q86VE3 508 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 PRELID2Q8N945 189 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 SPOCK2Q92563 424 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 CEP95Q96GE4 821 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 CEP63Q96MT8 703 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 OSGEPQ9NPF4 335 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 BTBD7Q9P203 1132 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 TBK1Q9UHD2 729 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 ATAD5Q96QE3 1844 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 ANKRD63C9JTQ0 380 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 TCEA3O75764 348 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 VCAM1P19320 739 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 GRIA2P42262 883 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 GALK1P51570 392 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 GALCP54803 685 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 SYDE2Q5VT97 1194 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 TTC27Q6P3X3 843 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 MYOCDQ8IZQ8 938 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 DIS3LQ8TF46 1054 aaKnown RBP11.49□□□□□ -0.57
CHD6-208ENST00000480022 U2AF1L4Q8WU68 220 aaKnown RBP11.49□□□□□ -0.57
CHD6-208ENST00000480022 SIKE1Q9BRV8 207 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 KANSL2Q9H9L4 492 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 GINM1Q9NU53 330 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 MTMR4Q9NYA4 1195 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 CSADQ9Y600 493 aa11.49□□□□□ -0.57
CHD6-208ENST00000480022 PAPPA2Q9BXP8 1791 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 SYNGAP1Q96PV0 1343 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 A0A1W2PRG0 241 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 OR52Z1P0C646 297 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 PTPRAP18433 802 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 MUTP22033 750 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 PHLDB2Q86SQ0 1253 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 SIAH1Q8IUQ4 282 aa11.48□□□□□ -0.57
CHD6-208ENST00000480022 SLC35G2Q8TBE7 412 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms