RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 TMEM130Q8N3G9 435 aa13.86□□□□□ -0.19
SEC13-216ENST00000479868 NIF3L1Q9GZT8 377 aa13.86□□□□□ -0.19
SEC13-216ENST00000479868 CDT1Q9H211 546 aa13.86□□□□□ -0.19
SEC13-216ENST00000479868 IFT122Q9HBG6 1241 aa13.86□□□□□ -0.19
SEC13-216ENST00000479868 CISHQ9NSE2 258 aa13.86□□□□□ -0.19
SEC13-216ENST00000479868 GRHL1Q9NZI5 618 aa13.86□□□□□ -0.19
SEC13-216ENST00000479868 RASAL2Q9UJF2 1139 aa13.86□□□□□ -0.19
SEC13-216ENST00000479868 MTUS1Q9ULD2 1270 aa13.86□□□□□ -0.19
SEC13-216ENST00000479868 PTPN22Q9Y2R2 807 aa13.86□□□□□ -0.19
SEC13-216ENST00000479868 FSCN2O14926 492 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 PROSCO94903 275 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 WEE2P0C1S8 567 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 TMEM191BP0C7N4 346 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 CXCL8P10145 99 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 SLC1A1P43005 524 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 RPL21P46778 160 aaKnown RBP13.85□□□□□ -0.19
SEC13-216ENST00000479868 PLTPP55058 493 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 TRPC3Q13507 836 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 SGSM1Q2NKQ1 1148 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 PLEKHA7Q6IQ23 1121 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 ZDHHC24Q6UX98 284 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 LRIG3Q6UXM1 1119 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 SCARA5Q6ZMJ2 495 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 CCDC105Q8IYK2 499 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 FBXO25Q8TCJ0 367 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 DDX27Q96GQ7 796 aaKnown RBP13.85□□□□□ -0.19
SEC13-216ENST00000479868 VCPIP1Q96JH7 1222 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 MS4A4AQ96JQ5 239 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 HERPUD2Q9BSE4 406 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 TXLNGYQ9BZA5 131 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 XYLT2Q9H1B5 865 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 SCN4AP35499 1836 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 BTBD19C9JJ37 291 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 RPS6KA5O75582 802 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 ZNF286BP0CG31 522 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 ASPAP45381 313 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 DRG2P55039 364 aaKnown RBP13.85□□□□□ -0.19
SEC13-216ENST00000479868 ZNF844Q08AG5 666 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 LAMC2Q13753 1193 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 SURF1Q15526 300 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 C12orf50Q8NA57 414 aaPredicted RBP13.85□□□□□ -0.19
SEC13-216ENST00000479868 C1orf54Q8WWF1 131 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 TNFSF13BQ9Y275 285 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 ATP8A1Q9Y2Q0 1164 aa13.85□□□□□ -0.19
SEC13-216ENST00000479868 GPR25O00155 361 aa13.84□□□□□ -0.19
SEC13-216ENST00000479868 B4GALT4O60513 344 aa13.84□□□□□ -0.19
SEC13-216ENST00000479868 PPFIA2O75334 1257 aa13.84□□□□□ -0.19
SEC13-216ENST00000479868 ADCYAP1R1P41586 468 aa13.84□□□□□ -0.19
SEC13-216ENST00000479868 CCNA1P78396 465 aa13.84□□□□□ -0.19
SEC13-216ENST00000479868 C1QBPQ07021 282 aaKnown RBP13.84□□□□□ -0.19
SEC13-216ENST00000479868 MTMR3Q13615 1198 aa13.84□□□□□ -0.19
SEC13-216ENST00000479868 ZNF699Q32M78 642 aa13.84□□□□□ -0.19
SEC13-216ENST00000479868 TTC19Q6DKK2 380 aaPredicted RBP13.84□□□□□ -0.19
SEC13-216ENST00000479868 AFG1LQ8WV93 481 aa13.84□□□□□ -0.19
SEC13-216ENST00000479868 ATP6V1G3Q96LB4 118 aa13.84□□□□□ -0.19
SEC13-216ENST00000479868 PLVAPQ9BX97 442 aa13.84□□□□□ -0.19
SEC13-216ENST00000479868 CAPS2Q9BXY5 557 aa13.84□□□□□ -0.19
SEC13-216ENST00000479868 TMBIM4Q9HC24 238 aa13.84□□□□□ -0.19
SEC13-216ENST00000479868 MRPL47Q9HD33 250 aaKnown RBP13.84□□□□□ -0.19
SEC13-216ENST00000479868 ZSWIM8A7E2V4 1837 aa13.84□□□□□ -0.19
SEC13-216ENST00000479868 A0A087WZ62 844 aa13.83□□□□□ -0.19
SEC13-216ENST00000479868 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.83□□□□□ -0.19
SEC13-216ENST00000479868 PODXLO00592 558 aa13.83□□□□□ -0.19
SEC13-216ENST00000479868 TLR3O15455 904 aaKnown RBP13.83□□□□□ -0.19
SEC13-216ENST00000479868 MEFVO15553 781 aaPredicted RBP13.83□□□□□ -0.19
SEC13-216ENST00000479868 ASAP2O43150 1006 aa13.83□□□□□ -0.19
SEC13-216ENST00000479868 GH1P01241 217 aa13.83□□□□□ -0.19
SEC13-216ENST00000479868 MMP8P22894 467 aa13.83□□□□□ -0.19
SEC13-216ENST00000479868 TAS2R40P59535 323 aa13.83□□□□□ -0.19
SEC13-216ENST00000479868 ZNF484Q5JVG2 852 aa13.83□□□□□ -0.19
SEC13-216ENST00000479868 MAP1SQ66K74 1059 aaPredicted RBP13.83□□□□□ -0.19
SEC13-216ENST00000479868 FOXR1Q6PIV2 292 aa13.83□□□□□ -0.19
SEC13-216ENST00000479868 C1orf131Q8NDD1 294 aaKnown RBP13.83□□□□□ -0.19
SEC13-216ENST00000479868 GTF3C2Q8WUA4 911 aaPredicted RBP13.83□□□□□ -0.19
SEC13-216ENST00000479868 FDXACB1Q9BRP7 624 aaPredicted RBP13.83□□□□□ -0.19
SEC13-216ENST00000479868 NFKBIZQ9BYH8 718 aa13.83□□□□□ -0.19
SEC13-216ENST00000479868 LRRC19Q9H756 370 aa13.83□□□□□ -0.19
SEC13-216ENST00000479868 LRRC4CQ9HCJ2 640 aa13.83□□□□□ -0.19
SEC13-216ENST00000479868 TNNC2P02585 160 aa13.83□□□□□ -0.2
SEC13-216ENST00000479868 VTNP04004 478 aa13.83□□□□□ -0.2
SEC13-216ENST00000479868 FNTAP49354 379 aa13.83□□□□□ -0.2
SEC13-216ENST00000479868 ATP1A2P50993 1020 aa13.83□□□□□ -0.2
SEC13-216ENST00000479868 IRAK1P51617 712 aa13.83□□□□□ -0.2
SEC13-216ENST00000479868 RPL7AP62424 266 aaKnown RBP13.83□□□□□ -0.2
SEC13-216ENST00000479868 SKOR1P84550 965 aa13.83□□□□□ -0.2
SEC13-216ENST00000479868 AMHR2Q16671 573 aa13.83□□□□□ -0.2
SEC13-216ENST00000479868 SGO2Q562F6 1265 aa13.83□□□□□ -0.2
SEC13-216ENST00000479868 PAXIP1Q6ZW49 1069 aaPredicted RBP13.83□□□□□ -0.2
SEC13-216ENST00000479868 LINC01465Q8N7H1 131 aa13.83□□□□□ -0.2
SEC13-216ENST00000479868 PPTC7Q8NI37 304 aa13.83□□□□□ -0.2
SEC13-216ENST00000479868 ATG4AQ8WYN0 398 aa13.83□□□□□ -0.2
SEC13-216ENST00000479868 TFAP2BQ92481 460 aa13.83□□□□□ -0.2
SEC13-216ENST00000479868 ANKRD36BP1Q96IX9 119 aa13.83□□□□□ -0.2
SEC13-216ENST00000479868 KATNBL1Q9H079 304 aa13.83□□□□□ -0.2
SEC13-216ENST00000479868 CENPHQ9H3R5 247 aa13.83□□□□□ -0.2
SEC13-216ENST00000479868 VTA1Q9NP79 307 aa13.83□□□□□ -0.2
SEC13-216ENST00000479868 CHST7Q9NS84 486 aa13.83□□□□□ -0.2
SEC13-216ENST00000479868 PRMT7Q9NVM4 692 aaPredicted RBP13.83□□□□□ -0.2
SEC13-216ENST00000479868 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.83□□□□□ -0.2
SEC13-216ENST00000479868 POLIQ9UNA4 740 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms