RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 DDX1Q92499 740 aaKnown RBP21.93■■□□□ 1.1
COL13A1-208ENST00000479733 STRA6Q9BX79 667 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 ARL8BQ9NVJ2 186 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 CAPN9O14815 690 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 ATP9AO75110 1047 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 POTEJP0CG39 1038 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 CLEC16AQ2KHT3 1053 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 PASD1Q8IV76 773 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 ZCCHC9Q8N567 271 aaKnown RBP21.93■■□□□ 1.1
COL13A1-208ENST00000479733 VTI1AQ96AJ9 217 aa21.93■■□□□ 1.1
COL13A1-208ENST00000479733 PRR11Q96HE9 360 aaPredicted RBP21.93■■□□□ 1.1
COL13A1-208ENST00000479733 P4HA2O15460 535 aa21.92■■□□□ 1.1
COL13A1-208ENST00000479733 VHLP40337 213 aa21.92■■□□□ 1.1
COL13A1-208ENST00000479733 FYB2Q5VWT5 728 aa21.92■■□□□ 1.1
COL13A1-208ENST00000479733 KIFAP3Q92845 792 aa21.92■■□□□ 1.1
COL13A1-208ENST00000479733 TMEM206Q9H813 350 aa21.92■■□□□ 1.1
COL13A1-208ENST00000479733 NYAP2Q9P242 653 aa21.92■■□□□ 1.1
COL13A1-208ENST00000479733 SUGT1Q9Y2Z0 365 aa21.92■■□□□ 1.1
COL13A1-208ENST00000479733 C2orf71A6NGG8 1288 aa21.92■■□□□ 1.1
COL13A1-208ENST00000479733 PRPF4O43172 522 aaKnown RBP eCLIP21.92■■□□□ 1.1
COL13A1-208ENST00000479733 LGR5O75473 907 aa21.92■■□□□ 1.1
COL13A1-208ENST00000479733 NPTXRO95502 500 aa21.92■■□□□ 1.1
COL13A1-208ENST00000479733 GPS1Q13098 491 aa21.92■■□□□ 1.1
COL13A1-208ENST00000479733 ACSBG2Q5FVE4 666 aa21.92■■□□□ 1.1
COL13A1-208ENST00000479733 BBOF1Q8ND07 529 aa21.92■■□□□ 1.1
COL13A1-208ENST00000479733 NT5C1BQ96P26 610 aa21.92■■□□□ 1.1
COL13A1-208ENST00000479733 VCXQ9H320 206 aa21.92■■□□□ 1.1
COL13A1-208ENST00000479733 HEY2Q9UBP5 337 aa21.92■■□□□ 1.1
COL13A1-208ENST00000479733 KLHL33A6NCF5 533 aa21.91■■□□□ 1.1
COL13A1-208ENST00000479733 ATF7P17544 494 aaPredicted RBP21.91■■□□□ 1.1
COL13A1-208ENST00000479733 RBM5P52756 815 aaKnown RBP eCLIP21.91■■□□□ 1.1
COL13A1-208ENST00000479733 PEX3P56589 373 aa21.91■■□□□ 1.1
COL13A1-208ENST00000479733 EFTUD2Q15029 972 aaKnown RBP eCLIP21.91■■□□□ 1.1
COL13A1-208ENST00000479733 CCNG2Q16589 344 aa21.91■■□□□ 1.1
COL13A1-208ENST00000479733 APOBEC3HQ6NTF7 200 aaKnown RBP21.91■■□□□ 1.1
COL13A1-208ENST00000479733 HAUS6Q7Z4H7 955 aa21.91■■□□□ 1.1
COL13A1-208ENST00000479733 MCOLN2Q8IZK6 566 aa21.91■■□□□ 1.1
COL13A1-208ENST00000479733 MKL1Q969V6 931 aa21.91■■□□□ 1.1
COL13A1-208ENST00000479733 KIFC3Q9BVG8 833 aa21.91■■□□□ 1.1
COL13A1-208ENST00000479733 FBXO6Q9NRD1 293 aaPredicted RBP21.91■■□□□ 1.1
COL13A1-208ENST00000479733 DNPEPQ9ULA0 475 aa21.91■■□□□ 1.1
COL13A1-208ENST00000479733 GYG2O15488 501 aa21.91■■□□□ 1.1
COL13A1-208ENST00000479733 IFNB1P01574 187 aa21.91■■□□□ 1.1
COL13A1-208ENST00000479733 MUTP22033 750 aa21.91■■□□□ 1.1
COL13A1-208ENST00000479733 ARSEP51690 589 aa21.91■■□□□ 1.1
COL13A1-208ENST00000479733 ZBTB16Q05516 673 aa21.91■■□□□ 1.1
COL13A1-208ENST00000479733 KLF1Q13351 362 aaPredicted RBP21.91■■□□□ 1.1
COL13A1-208ENST00000479733 LBRQ14739 615 aaKnown RBP21.91■■□□□ 1.1
COL13A1-208ENST00000479733 SNRNP35Q16560 246 aaKnown RBP21.91■■□□□ 1.1
COL13A1-208ENST00000479733 VPS52Q8N1B4 723 aa21.91■■□□□ 1.1
COL13A1-208ENST00000479733 MCUR1Q96AQ8 359 aa21.91■■□□□ 1.1
COL13A1-208ENST00000479733 SCOCQ9UIL1 159 aa21.91■■□□□ 1.1
COL13A1-208ENST00000479733 SMG5Q9UPR3 1016 aaKnown RBP21.91■■□□□ 1.1
COL13A1-208ENST00000479733 PIK3CDO00329 1044 aa21.9■■□□□ 1.1
COL13A1-208ENST00000479733 CENPCQ03188 943 aa21.9■■□□□ 1.1
COL13A1-208ENST00000479733 SLC45A4Q5BKX6 768 aa21.9■■□□□ 1.1
COL13A1-208ENST00000479733 RIBC1Q8N443 379 aaPredicted RBP21.9■■□□□ 1.1
COL13A1-208ENST00000479733 FAM136AQ96C01 138 aa21.9■■□□□ 1.1
COL13A1-208ENST00000479733 C11orf70Q9BRQ4 267 aa21.9■■□□□ 1.1
COL13A1-208ENST00000479733 PRR12Q9ULL5 1215 aa21.9■■□□□ 1.1
COL13A1-208ENST00000479733 KLRC2P26717 231 aa21.9■■□□□ 1.1
COL13A1-208ENST00000479733 ROR2Q01974 943 aaKnown RBP21.9■■□□□ 1.1
COL13A1-208ENST00000479733 NR1H3Q13133 447 aa21.9■■□□□ 1.1
COL13A1-208ENST00000479733 CTC1Q2NKJ3 1217 aa21.9■■□□□ 1.1
COL13A1-208ENST00000479733 CEP55Q53EZ4 464 aa21.9■■□□□ 1.1
COL13A1-208ENST00000479733 KRT39Q6A163 491 aa21.9■■□□□ 1.1
COL13A1-208ENST00000479733 WDR60Q8WVS4 1066 aa21.9■■□□□ 1.1
COL13A1-208ENST00000479733 DDX50Q9BQ39 737 aaKnown RBP21.9■■□□□ 1.1
COL13A1-208ENST00000479733 ASB3Q9Y575 518 aa21.9■■□□□ 1.1
COL13A1-208ENST00000479733 COL14A1Q05707 1796 aaKnown RBP21.9■■□□□ 1.1
COL13A1-208ENST00000479733 ZBED4O75132 1171 aa21.9■■□□□ 1.1
COL13A1-208ENST00000479733 TBX10O75333 385 aa21.9■■□□□ 1.1
COL13A1-208ENST00000479733 CETN2P41208 172 aa21.9■■□□□ 1.1
COL13A1-208ENST00000479733 PDIA2Q13087 525 aaKnown RBP21.9■■□□□ 1.1
COL13A1-208ENST00000479733 TRAPPC3LQ5T215 181 aa21.9■■□□□ 1.1
COL13A1-208ENST00000479733 ACSF2Q96CM8 615 aaPredicted RBP21.9■■□□□ 1.1
COL13A1-208ENST00000479733 KANSL3Q9P2N6 904 aa21.9■■□□□ 1.1
COL13A1-208ENST00000479733 A0A1B0GVG6 124 aa21.89■■□□□ 1.09
COL13A1-208ENST00000479733 IPO5O00410 1097 aaKnown RBP21.89■■□□□ 1.09
COL13A1-208ENST00000479733 TROVE2P10155 538 aaKnown RBP eCLIP21.89■■□□□ 1.09
COL13A1-208ENST00000479733 KCNA3P22001 575 aa21.89■■□□□ 1.09
COL13A1-208ENST00000479733 CNGA1P29973 690 aa21.89■■□□□ 1.09
COL13A1-208ENST00000479733 CPA2P48052 419 aa21.89■■□□□ 1.09
COL13A1-208ENST00000479733 PLCB3Q01970 1234 aa21.89■■□□□ 1.09
COL13A1-208ENST00000479733 LRRC6Q86X45 466 aa21.89■■□□□ 1.09
COL13A1-208ENST00000479733 POMGNT1Q8WZA1 660 aa21.89■■□□□ 1.09
COL13A1-208ENST00000479733 TAF1LQ8IZX4 1826 aa21.89■■□□□ 1.09
COL13A1-208ENST00000479733 C2CD2LO14523 706 aa21.89■■□□□ 1.09
COL13A1-208ENST00000479733 TRAFD1O14545 582 aaPredicted RBP21.89■■□□□ 1.09
COL13A1-208ENST00000479733 CCDC22O60826 627 aa21.89■■□□□ 1.09
COL13A1-208ENST00000479733 HAUS5O94927 633 aa21.89■■□□□ 1.09
COL13A1-208ENST00000479733 CFHP08603 1231 aa21.89■■□□□ 1.09
COL13A1-208ENST00000479733 ADSSP30520 456 aa21.89■■□□□ 1.09
COL13A1-208ENST00000479733 JAG1P78504 1218 aa21.89■■□□□ 1.09
COL13A1-208ENST00000479733 SGSM1Q2NKQ1 1148 aa21.89■■□□□ 1.09
COL13A1-208ENST00000479733 OR52E8Q6IFG1 317 aa21.89■■□□□ 1.09
COL13A1-208ENST00000479733 CCNJLQ8IV13 435 aa21.89■■□□□ 1.09
COL13A1-208ENST00000479733 GALNT15Q8N3T1 639 aa21.89■■□□□ 1.09
COL13A1-208ENST00000479733 BTBD10Q9BSF8 475 aa21.89■■□□□ 1.09
COL13A1-208ENST00000479733 TRIM4Q9C037 500 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms