RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 HDAC4P56524 1084 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 LSAMPQ13449 338 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 OLFML2BQ68BL8 750 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 KREMEN1Q96MU8 473 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 HERPUD2Q9BSE4 406 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 TCHPQ9BT92 498 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 TUFT1Q9NNX1 390 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 TRPV5Q9NQA5 729 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 ETNK2Q9NVF9 386 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 PDP2Q9P2J9 529 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 FAM198AQ9UFP1 575 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 NHSQ6T4R5 1651 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 TMEM247A6NEH6 219 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 SLC26A4O43511 780 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 SPAG7O75391 227 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 CETPP11597 493 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 SIX1Q15475 284 aaPredicted RBP11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 CEP55Q53EZ4 464 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 ZFYVE27Q5T4F4 411 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 BTNL9Q6UXG8 535 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 INTS8Q75QN2 995 aaKnown RBP11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 CBWD2Q8IUF1 395 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 FAM136AQ96C01 138 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 ABHD8Q96I13 439 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 KIFC3Q9BVG8 833 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 TMEM117Q9H0C3 514 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 HSPBP1Q9NZL4 362 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 R3HDM2Q9Y2K5 976 aaKnown RBP11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 LRCH1Q9Y2L9 728 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 COMMD3-BMI1R4GMX3 469 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 COL5A3P25940 1745 aaPredicted RBP11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 O00370 1275 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 TP73O15350 636 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 SLC16A4O15374 487 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 P4HA2O15460 535 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 TPBGLP0DKB5 382 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 HARSP12081 509 aaKnown RBP11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 FMO1Q01740 532 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 RNASELQ05823 741 aaKnown RBP11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 SLC15A2Q16348 729 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 ZNF280DQ6N043 979 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 EXOC8Q8IYI6 725 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 RBBP8NLQ8NC74 664 aaPredicted RBP11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 NCSTNQ92542 709 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 SPOCK2Q92563 424 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 SEMA4DQ92854 862 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 SLC5A5Q92911 643 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 LENG1Q96BZ8 264 aaPredicted RBP11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 PI4K2AQ9BTU6 479 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 SPATA16Q9BXB7 569 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 CYP39A1Q9NYL5 469 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 ATP8B3O60423 1300 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 MAGEA13PA6NCF6 341 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 PTDSS1P48651 473 aaKnown RBP11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 BNIP1Q12981 228 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 MAP7Q14244 749 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 TMED2Q15363 201 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 CLUL1Q15846 466 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 TMEM179Q6ZVK1 233 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 CERKQ8TCT0 537 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 ACER1Q8TDN7 264 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 ASAP3Q8TDY4 903 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 CD101Q93033 1021 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 PPP2R3CQ969Q6 453 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 TDRD3Q9H7E2 651 aaKnown RBP11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 ETNK1Q9HBU6 452 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 KLHL14Q9P2G3 628 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 LARSQ9P2J5 1176 aaKnown RBP11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 SEL1LQ9UBV2 794 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 H0Y3Z8 333 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 TTC4O95801 387 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 SPATA31D3P0C874 917 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 POLR2MP0CAP2 368 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 TROVE2P10155 538 aaKnown RBP eCLIP11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 SKIP12755 728 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 ALAS1P13196 640 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 IDO1P14902 403 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 CYP11B1P15538 503 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 MAPK4P31152 587 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 STAT2P52630 851 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 PEX3P56589 373 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 C1orf220Q5T0J3 134 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 SPATA31D4Q6ZUB0 917 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 CYFIP1Q7L576 1253 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 CROCCP2Q86T23 111 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 XXYLT1Q8NBI6 393 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 CPA5Q8WXQ8 436 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 HAUS1Q96CS2 278 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 TRIM11Q96F44 468 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 TMEM237Q96Q45 408 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 NUDCD1Q96RS6 583 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 LBHD1Q9BQE6 289 aaPredicted RBP11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 MIS12Q9H081 205 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 CCDC134Q9H6E4 229 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 KLHL11Q9NVR0 708 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 NKIRAS1Q9NYS0 192 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 ZNF180Q9UJW8 692 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 ANAPC5Q9UJX4 755 aa11.69□□□□□ -0.54
LRRFIP1-211ENST00000478958 NOCTQ9UK39 431 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms