RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 SMIM10L2BP0DMW5 78 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 NSFP46459 744 aaKnown RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 RAP1GAPP47736 663 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 CARSP49589 748 aaKnown RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 GYS2P54840 703 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 BPIFB4P59827 614 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 GUCY2DQ02846 1103 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 SMC1AQ14683 1233 aaKnown RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 CLEC16AQ2KHT3 1053 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 SGSM1Q2NKQ1 1148 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 GNASQ5JWF2 1037 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 JADE1Q6IE81 842 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 DPH6Q7L8W6 267 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 ZNF572Q7Z3I7 529 aaPredicted RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 MCOLN2Q8IZK6 566 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 LINC01465Q8N7H1 131 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 PDCD7Q8N8D1 485 aaKnown RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 ZNF564Q8TBZ8 553 aaPredicted RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 TMEM40Q8WWA1 233 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 TFAP2BQ92481 460 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 RNPC3Q96LT9 517 aaKnown RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 OSMRQ99650 979 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.41□□□□□ -1.7
USP25-208ENST00000478932 C11orf70Q9BRQ4 267 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 SELENOOQ9BVL4 669 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 PRDM10Q9NQV6 1147 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 PRMT7Q9NVM4 692 aaPredicted RBP4.41□□□□□ -1.7
USP25-208ENST00000478932 STIM2Q9P246 746 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 GTF3C4Q9UKN8 822 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 POLIQ9UNA4 740 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 DAAM1Q9Y4D1 1078 aa4.41□□□□□ -1.7
USP25-208ENST00000478932 KIAA0100Q14667 2235 aaKnown RBP4.4□□□□□ -1.7
USP25-208ENST00000478932 TCRBV7S2A1N4TA0A589 114 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 TARSL2A2RTX5 802 aaKnown RBP4.4□□□□□ -1.7
USP25-208ENST00000478932 MYO1FO00160 1098 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 PGRMC1O00264 195 aaKnown RBP4.4□□□□□ -1.7
USP25-208ENST00000478932 O00370 1275 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 MAP2K7O14733 419 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 DDX3YO15523 660 aaKnown RBP4.4□□□□□ -1.7
USP25-208ENST00000478932 RAD51CO43502 376 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 SPOPO43791 374 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 ZEB2O60315 1214 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 TSPAN1O60635 241 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 HEXIM1O94992 359 aaKnown RBP4.4□□□□□ -1.7
USP25-208ENST00000478932 PGK1P00558 417 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 F2P00734 622 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 TNNC2P02585 160 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 FAM153BP0C7A2 387 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 PYGMP11217 842 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 HOXD8P13378 290 aaPredicted RBP4.4□□□□□ -1.7
USP25-208ENST00000478932 TBXAS1P24557 533 aaPredicted RBP4.4□□□□□ -1.7
USP25-208ENST00000478932 BRD2P25440 801 aaKnown RBP4.4□□□□□ -1.7
USP25-208ENST00000478932 TNNT3P45378 269 aaPredicted RBP4.4□□□□□ -1.7
USP25-208ENST00000478932 ASPAP45381 313 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 PSEN1P49768 467 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 PEX5P50542 639 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 RPL7AP62424 266 aaKnown RBP4.4□□□□□ -1.7
USP25-208ENST00000478932 POU5F1BQ06416 359 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 ZNF699Q32M78 642 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 FAM153CQ494X1 144 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 GLRA4Q5JXX5 417 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 CCDC70Q6NSX1 233 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 CXCL17Q6UXB2 119 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 RUFY4Q6ZNE9 571 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 MMS22LQ6ZRQ5 1243 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 HDXQ7Z353 690 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 DDX42Q86XP3 938 aaKnown RBP eCLIP4.4□□□□□ -1.7
USP25-208ENST00000478932 ZDHHC14Q8IZN3 488 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 ACTRT1Q8TDG2 376 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 RIN2Q8WYP3 895 aaPredicted RBP4.4□□□□□ -1.7
USP25-208ENST00000478932 PBKQ96KB5 322 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 TMEM121BQ9BXQ6 578 aaPredicted RBP4.4□□□□□ -1.7
USP25-208ENST00000478932 EIF2AQ9BY44 585 aaKnown RBP4.4□□□□□ -1.7
USP25-208ENST00000478932 NFKBIZQ9BYH8 718 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 CELF4Q9BZC1 486 aaKnown RBP4.4□□□□□ -1.7
USP25-208ENST00000478932 NIF3L1Q9GZT8 377 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 FAM53CQ9NYF3 392 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 ADAM22Q9P0K1 906 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 FAM153AQ9UHL3 310 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 ANAPC7Q9UJX3 599 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 TMEM59LQ9UK28 342 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 NFU1Q9UMS0 254 aa4.4□□□□□ -1.7
USP25-208ENST00000478932 NOC2LQ9Y3T9 749 aaKnown RBP4.4□□□□□ -1.7
USP25-208ENST00000478932 NCANO14594 1321 aa4.4□□□□□ -1.71
USP25-208ENST00000478932 NRCAMQ92823 1304 aa4.4□□□□□ -1.71
USP25-208ENST00000478932 LRRC37A2A6NM11 1700 aa4.4□□□□□ -1.71
USP25-208ENST00000478932 PLXNB2O15031 1838 aa4.4□□□□□ -1.71
USP25-208ENST00000478932 C5orf42Q9H799 3197 aa4.4□□□□□ -1.71
USP25-208ENST00000478932 MYADML2A6NDP7 307 aa4.4□□□□□ -1.71
USP25-208ENST00000478932 FAM155AB1AL88 458 aaPredicted RBP4.4□□□□□ -1.71
USP25-208ENST00000478932 GPR32O75388 356 aa4.4□□□□□ -1.71
USP25-208ENST00000478932 CYP1A1P04798 512 aaPredicted RBP4.4□□□□□ -1.71
USP25-208ENST00000478932 CYP1A2P05177 515 aa4.4□□□□□ -1.71
USP25-208ENST00000478932 TUBBP07437 444 aa4.4□□□□□ -1.71
USP25-208ENST00000478932 MYL3P08590 195 aa4.4□□□□□ -1.71
USP25-208ENST00000478932 CYP2C9P11712 490 aa4.4□□□□□ -1.71
USP25-208ENST00000478932 CD19P15391 556 aa4.4□□□□□ -1.71
USP25-208ENST00000478932 EIF4BP23588 611 aaKnown RBP4.4□□□□□ -1.71
USP25-208ENST00000478932 AKAP5P24588 427 aa4.4□□□□□ -1.71
USP25-208ENST00000478932 POLR2BP30876 1174 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms