RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 IMPG2Q9BZV3 1241 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 GEMIN8Q9NWZ8 242 aaKnown RBP4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 RNF181Q9P0P0 153 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 STAP2Q9UGK3 403 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 CPA4Q9UI42 421 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 PCDHA6Q9UN73 950 aa4.96□□□□□ -1.62
SMARCA1-204ENST00000478420 AATKQ6ZMQ8 1374 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 ZNF785A8K8V0 405 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 NDUFA10O95299 355 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 GPANK1O95872 356 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 AHSGP02765 367 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 GNAI2P04899 355 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 CFIP05156 583 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 FCER1AP12319 257 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 LAG3P18627 525 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 FGFR4P22455 802 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 PTGS2P35354 604 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 KRTAP10-2P60368 255 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 HSD11B2P80365 405 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 PIGFQ07326 219 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 SLFN5Q08AF3 891 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 ZNF844Q08AG5 666 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 LSM12Q3MHD2 195 aaKnown RBP4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 SPDYE7PQ495Y7 208 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 CCDC149Q6ZUS6 474 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 CHST15Q7LFX5 561 aaPredicted RBP4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 KIAA0319LQ8IZA0 1049 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 TMIEQ8NEW7 156 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 HAS1Q92839 578 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 SCAMP4Q969E2 229 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 MED15Q96RN5 788 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 ZNF341Q9BYN7 854 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 SIK2Q9H0K1 926 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 VPS11Q9H270 941 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 RSAD1Q9HA92 442 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 USP25Q9UHP3 1055 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 L1RE1Q9UN81 338 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 CDYLQ9Y232 598 aa4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 MTO1Q9Y2Z2 717 aaKnown RBP4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 REXO2Q9Y3B8 237 aaKnown RBP4.95□□□□□ -1.62
SMARCA1-204ENST00000478420 A0A1W2PPL8 197 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 PRSS29PA6NIE9 313 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 ERN1O75460 977 aaKnown RBP4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 ZBED1O96006 694 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 CHEK2O96017 543 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 HDCP19113 662 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 NR4A1P22736 598 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 KCNJ5P48544 419 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 CACNB3P54284 484 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 USP14P54578 494 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 SOX8P57073 446 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 OCA2Q04671 838 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 EXOSC9Q06265 439 aaKnown RBP4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 PUM1Q14671 1186 aaKnown RBP eCLIP4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 BEAN1Q3B7T3 259 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 TIGD2Q4W5G0 525 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 CCDC181Q5TID7 509 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 EMC10Q5UCC4 262 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 ARMC6Q6NXE6 501 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 MAEAQ7L5Y9 396 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 TMEM132CQ8N3T6 1108 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 PDPRQ8NCN5 879 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 DDX17Q92841 729 aaKnown RBP4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 MYEOVQ96EZ4 313 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 NT5C1BQ96P26 610 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 ZNF747Q9BV97 191 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 TLR10Q9BXR5 811 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 NRDE2Q9H7Z3 1164 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 GPR35Q9HC97 309 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 SLC2A4RGQ9NR83 387 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 PIH1D1Q9NWS0 290 aaKnown RBP4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 KCNE5Q9UJ90 142 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 FZD1Q9UP38 647 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 MAP3K2Q9Y2U5 619 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 NOX1Q9Y5S8 564 aa4.94□□□□□ -1.62
SMARCA1-204ENST00000478420 A6NNZ2 444 aa4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 TPP1O14773 563 aa4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 MATN3O15232 486 aa4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 PHGDHO43175 533 aaKnown RBP4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 HRGP04196 525 aa4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 ELANEP08246 267 aa4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 DDX6P26196 483 aaKnown RBP eCLIP4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 BMPR1AP36894 532 aa4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 ZNF135P52742 658 aaPredicted RBP4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 HLTFQ14527 1009 aaKnown RBP eCLIP4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 CNN3Q15417 329 aaKnown RBP4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 KIAA0753Q2KHM9 967 aa4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 DARS2Q6PI48 645 aaKnown RBP4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 DBX2Q6ZNG2 339 aa4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 LRRC55Q6ZSA7 311 aa4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 CFAP52Q8N1V2 620 aa4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 FAM43AQ8N2R8 423 aa4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 CELF5Q8N6W0 485 aaKnown RBP4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 PCSK9Q8NBP7 692 aaKnown RBP4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 FAM156AQ8NDB6 213 aa4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 CPEB3Q8NE35 698 aaKnown RBP4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 TTC17Q96AE7 1141 aa4.93□□□□□ -1.62
SMARCA1-204ENST00000478420 LENG9Q96B70 501 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms