RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 NUP85Q9BW27 656 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 RMI1Q9H9A7 625 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 SAYSD1Q9NPB0 183 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 INIPQ9NRY2 104 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 SAP30BPQ9UHR5 308 aaKnown RBP10.4□□□□□ -0.74
COL13A1-207ENST00000478219 ANGPTL2Q9UKU9 493 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 MYH11P35749 1972 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 GTPBP10A4D1E9 387 aaKnown RBP10.4□□□□□ -0.74
COL13A1-207ENST00000478219 CALUO43852 315 aaPredicted RBP10.4□□□□□ -0.74
COL13A1-207ENST00000478219 HNRNPCL1O60812 293 aaKnown RBP10.4□□□□□ -0.74
COL13A1-207ENST00000478219 GAS8O95995 478 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 SMIM18P0DKX4 95 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 GTF2H1P32780 548 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 ADCY7P51828 1080 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 RAP1GDS1P52306 607 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 HIRAP54198 1017 aaPredicted RBP10.4□□□□□ -0.74
COL13A1-207ENST00000478219 ZBTB16Q05516 673 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 NCOA4Q13772 614 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 MAP7Q14244 749 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 KIF22Q14807 665 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 HSF5Q4G112 596 aaPredicted RBP10.4□□□□□ -0.74
COL13A1-207ENST00000478219 SH3D19Q5HYK7 790 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 FYB2Q5VWT5 728 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 CATSPER3Q86XQ3 398 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 ARHGEF19Q8IW93 802 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 FAM186BQ8IYM0 893 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 METTL25Q8N6Q8 603 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 RIN3Q8TB24 985 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 PYDC1Q8WXC3 89 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 MIS12Q9H081 205 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 TYW1Q9NV66 732 aaKnown RBP10.4□□□□□ -0.74
COL13A1-207ENST00000478219 TMOD3Q9NYL9 352 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 APEX2Q9UBZ4 518 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 HEMK1Q9Y5R4 338 aaPredicted RBP10.4□□□□□ -0.74
COL13A1-207ENST00000478219 MYO3BQ8WXR4 1341 aa10.4□□□□□ -0.75
COL13A1-207ENST00000478219 MYOCOSA0A1B0GUC4 107 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 FAM237BA0A1B0GVD1 139 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 A8MXQ7 604 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 FCHO1O14526 889 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 CYP26A1O43174 497 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 ATP9BO43861 1147 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 PPP1R11O60927 126 aaPredicted RBP10.39□□□□□ -0.75
COL13A1-207ENST00000478219 ENO1P06733 434 aaKnown RBP10.39□□□□□ -0.75
COL13A1-207ENST00000478219 ARFIP2P53365 341 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 ADARP55265 1226 aaKnown RBP10.39□□□□□ -0.75
COL13A1-207ENST00000478219 ARL4CP56559 192 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 TBL3Q12788 808 aaKnown RBP10.39□□□□□ -0.75
COL13A1-207ENST00000478219 ORC2Q13416 577 aaPredicted RBP10.39□□□□□ -0.75
COL13A1-207ENST00000478219 GRM2Q14416 872 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 C3orf67Q6ZVT6 689 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 NLRX1Q86UT6 975 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 RASSF3Q86WH2 238 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 PDSS2Q86YH6 399 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 SCUBE1Q8IWY4 988 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 NME8Q8N427 588 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 RDH13Q8NBN7 331 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 OR6Y1Q8NGX8 325 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 ZNF564Q8TBZ8 553 aaPredicted RBP10.39□□□□□ -0.75
COL13A1-207ENST00000478219 HSPBAP1Q96EW2 488 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 CCDC77Q9BR77 488 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 THTPAQ9BU02 230 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 DCLK3Q9C098 648 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 TFCP2L1Q9NZI6 479 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 PLA2G4CQ9UP65 541 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 ARFGEF1Q9Y6D6 1849 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 ROBO3Q96MS0 1386 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 SGPL1O95470 568 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 DLDP09622 509 aaKnown RBP10.39□□□□□ -0.75
COL13A1-207ENST00000478219 ZSCAN5DPP0CG00 497 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 TROVE2P10155 538 aaKnown RBP eCLIP10.39□□□□□ -0.75
COL13A1-207ENST00000478219 CYP19A1P11511 503 aaPredicted RBP10.39□□□□□ -0.75
COL13A1-207ENST00000478219 NMT1P30419 496 aaKnown RBP10.39□□□□□ -0.75
COL13A1-207ENST00000478219 HOXA7P31268 230 aaPredicted RBP10.39□□□□□ -0.75
COL13A1-207ENST00000478219 CDK16Q00536 496 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 HNRNPDQ14103 355 aaKnown RBP10.39□□□□□ -0.75
COL13A1-207ENST00000478219 KLHDC10Q6PID8 442 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 ZNF804AQ7Z570 1209 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 ANKS1BQ7Z6G8 1248 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 ULK2Q8IYT8 1036 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 ZNF444Q8N0Y2 327 aaPredicted RBP10.39□□□□□ -0.75
COL13A1-207ENST00000478219 TCP10LQ8TDR4 215 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 GAB3Q8WWW8 586 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 ELMO3Q96BJ8 720 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 CCDC28BQ9BUN5 200 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 IL1RAPL1Q9NZN1 696 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 TUBGCP4Q9UGJ1 667 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 ADAMTS6Q9UKP5 1117 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 SMG5Q9UPR3 1016 aaKnown RBP10.39□□□□□ -0.75
COL13A1-207ENST00000478219 STRCQ7RTU9 1775 aa10.39□□□□□ -0.75
COL13A1-207ENST00000478219 DCAF8L1A6NGE4 600 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 CALCAP01258 141 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 TFAP2AP05549 437 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 MYL2P10916 166 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 PEX2P28328 305 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 ADSSP30520 456 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 ACTR3P61158 418 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 NOP14P78316 857 aaKnown RBP10.38□□□□□ -0.75
COL13A1-207ENST00000478219 DLG4P78352 724 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 KDSRQ06136 332 aa10.38□□□□□ -0.75
COL13A1-207ENST00000478219 MTM1Q13496 603 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms