RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 CCDC195A0A1B0GUA6 201 aa16.85■□□□□ 0.29
HMGA1-206ENST00000478214 LOC730098B7Z3J9 87 aa16.85■□□□□ 0.29
HMGA1-206ENST00000478214 GADD45BO75293 160 aaPredicted RBP16.85■□□□□ 0.29
HMGA1-206ENST00000478214 SP100P23497 879 aaPredicted RBP16.85■□□□□ 0.29
HMGA1-206ENST00000478214 ARPP19P56211 112 aa16.85■□□□□ 0.29
HMGA1-206ENST00000478214 ROR1Q01973 937 aa16.85■□□□□ 0.29
HMGA1-206ENST00000478214 PNOCQ13519 176 aa16.85■□□□□ 0.29
HMGA1-206ENST00000478214 SNRNP35Q16560 246 aaKnown RBP16.85■□□□□ 0.29
HMGA1-206ENST00000478214 CTXN3Q4LDR2 81 aa16.85■□□□□ 0.29
HMGA1-206ENST00000478214 SCARA3Q6AZY7 606 aa16.85■□□□□ 0.29
HMGA1-206ENST00000478214 SLC8B1Q6J4K2 584 aa16.85■□□□□ 0.29
HMGA1-206ENST00000478214 C12orf56Q8IXR9 622 aa16.85■□□□□ 0.29
HMGA1-206ENST00000478214 C1orf127Q8N9H9 656 aa16.85■□□□□ 0.29
HMGA1-206ENST00000478214 XXYLT1Q8NBI6 393 aa16.85■□□□□ 0.29
HMGA1-206ENST00000478214 CACTINQ8WUQ7 758 aaKnown RBP16.85■□□□□ 0.29
HMGA1-206ENST00000478214 ZNF707Q96C28 371 aaPredicted RBP16.85■□□□□ 0.29
HMGA1-206ENST00000478214 CCDC34Q96HJ3 373 aa16.85■□□□□ 0.29
HMGA1-206ENST00000478214 KCTD10Q9H3F6 313 aa16.85■□□□□ 0.29
HMGA1-206ENST00000478214 CGNQ9P2M7 1197 aaKnown RBP16.85■□□□□ 0.29
HMGA1-206ENST00000478214 PTPRJQ12913 1337 aa16.85■□□□□ 0.29
HMGA1-206ENST00000478214 ANK1P16157 1881 aa16.84■□□□□ 0.29
HMGA1-206ENST00000478214 ZMYND10O75800 440 aa16.84■□□□□ 0.29
HMGA1-206ENST00000478214 ITGB3P05106 788 aa16.84■□□□□ 0.29
HMGA1-206ENST00000478214 POLR2BP30876 1174 aaKnown RBP16.84■□□□□ 0.29
HMGA1-206ENST00000478214 TAF6P49848 677 aa16.84■□□□□ 0.29
HMGA1-206ENST00000478214 YWHAHQ04917 246 aaPredicted RBP16.84■□□□□ 0.29
HMGA1-206ENST00000478214 KCNB1Q14721 858 aa16.84■□□□□ 0.29
HMGA1-206ENST00000478214 LIN9Q5TKA1 542 aa16.84■□□□□ 0.29
HMGA1-206ENST00000478214 ZNF280DQ6N043 979 aa16.84■□□□□ 0.29
HMGA1-206ENST00000478214 C15orf39Q6ZRI6 1047 aa16.84■□□□□ 0.29
HMGA1-206ENST00000478214 USP37Q86T82 979 aa16.84■□□□□ 0.29
HMGA1-206ENST00000478214 OR5B17Q8NGF7 314 aa16.84■□□□□ 0.29
HMGA1-206ENST00000478214 GOLGA5Q8TBA6 731 aa16.84■□□□□ 0.29
HMGA1-206ENST00000478214 MTMR12Q9C0I1 747 aa16.84■□□□□ 0.29
HMGA1-206ENST00000478214 INTS13Q9NVM9 706 aa16.84■□□□□ 0.29
HMGA1-206ENST00000478214 ZDHHC7Q9NXF8 308 aa16.84■□□□□ 0.29
HMGA1-206ENST00000478214 AGAP1Q9UPQ3 857 aa16.84■□□□□ 0.29
HMGA1-206ENST00000478214 MAPK8IP1Q9UQF2 711 aa16.84■□□□□ 0.29
HMGA1-206ENST00000478214 WDR27A2RRH5 827 aa16.83■□□□□ 0.28
HMGA1-206ENST00000478214 PDXKO00764 312 aa16.83■□□□□ 0.28
HMGA1-206ENST00000478214 OAZ2O95190 189 aa16.83■□□□□ 0.28
HMGA1-206ENST00000478214 C8AP07357 584 aa16.83■□□□□ 0.28
HMGA1-206ENST00000478214 TMEM191BP0C7N4 346 aa16.83■□□□□ 0.28
HMGA1-206ENST00000478214 ODC1P11926 461 aa16.83■□□□□ 0.28
HMGA1-206ENST00000478214 TYMPP19971 482 aa16.83■□□□□ 0.28
HMGA1-206ENST00000478214 PAX3P23760 479 aa16.83■□□□□ 0.28
HMGA1-206ENST00000478214 CYP24A1Q07973 514 aa16.83■□□□□ 0.28
HMGA1-206ENST00000478214 SURF1Q15526 300 aa16.83■□□□□ 0.28
HMGA1-206ENST00000478214 CSGALNACT2Q8N6G5 542 aa16.83■□□□□ 0.28
HMGA1-206ENST00000478214 CXorf38Q8TB03 319 aa16.83■□□□□ 0.28
HMGA1-206ENST00000478214 SLC7A14Q8TBB6 771 aa16.83■□□□□ 0.28
HMGA1-206ENST00000478214 SMG7Q92540 1137 aaKnown RBP16.83■□□□□ 0.28
HMGA1-206ENST00000478214 ERCC4Q92889 916 aaPredicted RBP16.83■□□□□ 0.28
HMGA1-206ENST00000478214 BORCS6Q96GS4 357 aa16.83■□□□□ 0.28
HMGA1-206ENST00000478214 PRKD2Q9BZL6 878 aa16.83■□□□□ 0.28
HMGA1-206ENST00000478214 TSHZ2Q9NRE2 1034 aa16.83■□□□□ 0.28
HMGA1-206ENST00000478214 CYB561D2O14569 222 aa16.82■□□□□ 0.28
HMGA1-206ENST00000478214 EXOC3O60645 756 aa16.82■□□□□ 0.28
HMGA1-206ENST00000478214 ABLIM3O94929 683 aa16.82■□□□□ 0.28
HMGA1-206ENST00000478214 PAPLNO95428 1278 aa16.82■□□□□ 0.28
HMGA1-206ENST00000478214 PSMD6Q15008 389 aa16.82■□□□□ 0.28
HMGA1-206ENST00000478214 PPM1LQ5SGD2 360 aa16.82■□□□□ 0.28
HMGA1-206ENST00000478214 OVOS1Q6IE37 1185 aa16.82■□□□□ 0.28
HMGA1-206ENST00000478214 CYP26C1Q6V0L0 522 aa16.82■□□□□ 0.28
HMGA1-206ENST00000478214 ZNF461Q8TAF7 563 aa16.82■□□□□ 0.28
HMGA1-206ENST00000478214 CCDC127Q96BQ5 260 aa16.82■□□□□ 0.28
HMGA1-206ENST00000478214 ANKRD36BP1Q96IX9 119 aa16.82■□□□□ 0.28
HMGA1-206ENST00000478214 ZNF560Q96MR9 790 aa16.82■□□□□ 0.28
HMGA1-206ENST00000478214 TIGD1Q96MW7 591 aa16.82■□□□□ 0.28
HMGA1-206ENST00000478214 RHOBTB2Q9BYZ6 727 aa16.82■□□□□ 0.28
HMGA1-206ENST00000478214 PIDD1Q9HB75 910 aa16.82■□□□□ 0.28
HMGA1-206ENST00000478214 DMAC2Q9NW81 257 aa16.82■□□□□ 0.28
HMGA1-206ENST00000478214 SIX4Q9UIU6 781 aa16.82■□□□□ 0.28
HMGA1-206ENST00000478214 ITGA11Q9UKX5 1188 aa16.82■□□□□ 0.28
HMGA1-206ENST00000478214 KPNA7A9QM74 516 aa16.81■□□□□ 0.28
HMGA1-206ENST00000478214 C2CD4DB7Z1M9 353 aa16.81■□□□□ 0.28
HMGA1-206ENST00000478214 KIF20AO95235 890 aa16.81■□□□□ 0.28
HMGA1-206ENST00000478214 TNNC2P02585 160 aa16.81■□□□□ 0.28
HMGA1-206ENST00000478214 NR3C1P04150 777 aa16.81■□□□□ 0.28
HMGA1-206ENST00000478214 CYP11A1P05108 521 aa16.81■□□□□ 0.28
HMGA1-206ENST00000478214 KRT19P08727 400 aa16.81■□□□□ 0.28
HMGA1-206ENST00000478214 OR4Q2P0C623 313 aa16.81■□□□□ 0.28
HMGA1-206ENST00000478214 DLATP10515 647 aaKnown RBP16.81■□□□□ 0.28
HMGA1-206ENST00000478214 RBP5P82980 135 aa16.81■□□□□ 0.28
HMGA1-206ENST00000478214 DUOXA2Q1HG44 320 aa16.81■□□□□ 0.28
HMGA1-206ENST00000478214 SV2CQ496J9 727 aa16.81■□□□□ 0.28
HMGA1-206ENST00000478214 RNF135Q8IUD6 432 aa16.81■□□□□ 0.28
HMGA1-206ENST00000478214 WDR49Q8IV35 697 aa16.81■□□□□ 0.28
HMGA1-206ENST00000478214 SLC9A9Q8IVB4 645 aa16.81■□□□□ 0.28
HMGA1-206ENST00000478214 SMYD4Q8IYR2 804 aaPredicted RBP16.81■□□□□ 0.28
HMGA1-206ENST00000478214 GUF1Q8N442 669 aaKnown RBP16.81■□□□□ 0.28
HMGA1-206ENST00000478214 LRRC52Q8N7C0 313 aa16.81■□□□□ 0.28
HMGA1-206ENST00000478214 MFSD14AQ96MC6 490 aa16.81■□□□□ 0.28
HMGA1-206ENST00000478214 FNBP1Q96RU3 617 aa16.81■□□□□ 0.28
HMGA1-206ENST00000478214 CGRRF1Q99675 332 aa16.81■□□□□ 0.28
HMGA1-206ENST00000478214 GZF1Q9H116 711 aaPredicted RBP16.81■□□□□ 0.28
HMGA1-206ENST00000478214 EPHX3Q9H6B9 360 aa16.81■□□□□ 0.28
HMGA1-206ENST00000478214 NR2E1Q9Y466 385 aa16.81■□□□□ 0.28
HMGA1-206ENST00000478214 CCL16O15467 120 aa16.8■□□□□ 0.28
HMGA1-206ENST00000478214 KINO60870 393 aaKnown RBP16.8■□□□□ 0.28
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