RNA–Protein interactions for RNA: ENST00000478022.2

CHAMP1-203, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

TSL 3

Gene CHAMP1, Length 468 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-203ENST00000478022 EFCAB12Q6NXP0 572 aa5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 BRAPQ7Z569 592 aa5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 SPRED2Q7Z698 418 aa5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 RPAINQ86UA6 219 aa5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 RTN4RL1Q86UN2 441 aaPredicted RBP5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 NPAS4Q8IUM7 802 aa5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 C4orf19Q8IY42 314 aa5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 METTL13Q8N6R0 699 aa5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 DBF4BQ8NFT6 615 aa5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 BCL7CQ8WUZ0 217 aaPredicted RBP5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 LINC01599Q8WXQ3 324 aa5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 HERVK_113Q902F9 699 aa5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 TMEM143Q96AN5 459 aa5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 FAM167AQ96KS9 214 aa5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 RNPC3Q96LT9 517 aaKnown RBP5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 PLIN2Q99541 437 aa5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 CELF4Q9BZC1 486 aaKnown RBP5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 ADAMTS10Q9H324 1103 aa5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 TMX1Q9H3N1 280 aa5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 CYP26B1Q9NR63 512 aa5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 LRWD1Q9UFC0 647 aa5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 PARP2Q9UGN5 583 aa5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 NOC2LQ9Y3T9 749 aaKnown RBP5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 SNX11Q9Y5W9 270 aa5.67□□□□□ -1.5
CHAMP1-203ENST00000478022 TTC3P53804 2025 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 A0A087X0B3 334 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 E9PMD0 336 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 MAFO75444 373 aaPredicted RBP5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 LEFTY1O75610 366 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 LRIG2O94898 1065 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 F13A1P00488 732 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 HSP90AA1P07900 732 aaKnown RBP5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 RPA1P27694 616 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 NTF4P34130 210 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 RFC2P35250 354 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 DDIT3P35638 169 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 CCT6AP40227 531 aaKnown RBP5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 PRPHP41219 470 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 RARRES1P49788 294 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 NLRP11P59045 1033 aaKnown RBP5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 WDR5P61964 334 aaKnown RBP5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 PRKCQQ04759 706 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 ORC2Q13416 577 aaPredicted RBP5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 PDIA5Q14554 519 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 EMC2Q15006 297 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 TAF2Q6P1X5 1199 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 CNKSR3Q6P9H4 555 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 LRFN4Q6PJG9 635 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 DNAJC14Q6Y2X3 702 aaPredicted RBP5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 AGMOQ6ZNB7 445 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 Q7L0L9 218 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 MAEAQ7L5Y9 396 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 EPSTI1Q96J88 318 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 CEP170P1Q96L14 293 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 POLR3CQ9BUI4 534 aaPredicted RBP5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 CSRNP2Q9H175 543 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 MIR1-1HGQ9H1L0 117 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 DHX33Q9H6R0 707 aaKnown RBP5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 ZSWIM4Q9H7M6 989 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 MINDY3Q9H8M7 445 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 GPRC5CQ9NQ84 441 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 FBXO2Q9UK22 296 aaPredicted RBP5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 AKT3Q9Y243 479 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 GINS2Q9Y248 185 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 YBX2Q9Y2T7 364 aaKnown RBP5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 TRPV2Q9Y5S1 764 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 MYH11P35749 1972 aa5.66□□□□□ -1.5
CHAMP1-203ENST00000478022 A0A087WZ62 844 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 NPHP3-ACAD11A0A0J9YXS1 232 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 A0A1W2PPC1 479 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 LCHNA4D1U4 455 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 LAD1O00515 517 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 ENPP3O14638 875 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 MAGEB2O15479 319 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 USO1O60763 962 aaKnown RBP5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 CAND2O75155 1236 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 CEACAM5P06731 702 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 NASPP49321 788 aaPredicted RBP5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 GPC3P51654 580 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 OXCT1P55809 520 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 ETF1P62495 437 aaKnown RBP5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 SLC39A14Q15043 492 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 KARSQ15046 597 aaKnown RBP5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 ZRSR1Q15695 479 aaKnown RBP5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 LRIT3Q3SXY7 679 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 TMEM119Q4V9L6 283 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 PSRC1Q6PGN9 363 aaPredicted RBP5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 ARMCX6Q7L4S7 300 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 FAM228AQ86W67 206 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 RHPN2Q8IUC4 686 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 HID1Q8IV36 788 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 RPUSD2Q8IZ73 545 aaKnown RBP5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 PLD6Q8N2A8 252 aaKnown RBP5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 FAM181AQ8N9Y4 354 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 LINC00301Q8NCQ3 95 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 PRPF31Q8WWY3 499 aaKnown RBP5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 PLPPR2Q96GM1 343 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 HRASLS5Q96KN8 279 aa5.65□□□□□ -1.5
CHAMP1-203ENST00000478022 FDXACB1Q9BRP7 624 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms