RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-208	ENST00000477447	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	4.2	□□□□□ -1.74
TARDBP-208	ENST00000477447	ZDHHC8	Q9ULC8	765 aa		4.2	□□□□□ -1.74
TARDBP-208	ENST00000477447	MAP3K2	Q9Y2U5	619 aa		4.2	□□□□□ -1.74
TARDBP-208	ENST00000477447	FPGT-TNNI3K	V9GXZ4	949 aa		4.2	□□□□□ -1.74
TARDBP-208	ENST00000477447		A0A1B0GTW7	788 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	CCDC78	A2IDD5	438 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	CFAP69	A5D8W1	941 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	C1QTNF3-AMACR	E9PGA6	284 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447		M0QYG6	137 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	RNASET2	O00584	256 aa	Known RBP	4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	PLSCR1	O15162	318 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	PHGDH	O43175	533 aa	Known RBP	4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	ERN1	O75460	977 aa	Known RBP	4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	GPANK1	O95872	356 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	ZBED1	O96006	694 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	ANXA1	P04083	346 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	NPR1	P16066	1061 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	KCNJ5	P48544	419 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	TBX4	P57082	545 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	KRTAP10-2	P60368	255 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	GPSM2	P81274	684 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	OCA2	Q04671	838 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	KIF22	Q14807	665 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	KIAA0753	Q2KHM9	967 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	FOXR2	Q6PJQ5	311 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	NOL8	Q76FK4	1167 aa	Known RBP	4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	CHST15	Q7LFX5	561 aa	Predicted RBP	4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	PDSS2	Q86YH6	399 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	MAPKAPK5	Q8IW41	473 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	CCAR1	Q8IX12	1150 aa	Known RBP	4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	PDPR	Q8NCN5	879 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	SCAMP4	Q969E2	229 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	PNKP	Q96T60	521 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	RSAD1	Q9HA92	442 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	AKIP1	Q9NQ31	210 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	GEMIN8	Q9NWZ8	242 aa	Known RBP	4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	HSFX1	Q9UBD0	423 aa		4.19	□□□□□ -1.74
TARDBP-208	ENST00000477447	PRSS29P	A6NIE9	313 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447		E9PLN8	166 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	KIT	P10721	976 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	INSRR	P14616	1297 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	RHCE	P18577	417 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	HDC	P19113	662 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	NR4A1	P22736	598 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	SLC7A1	P30825	629 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	CACNB3	P54284	484 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	FAM193A	P78312	1265 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	MXRA7	P84157	204 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	RHD	Q02161	417 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	FOXE3	Q13461	319 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	CRB2	Q5IJ48	1285 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	RNF220	Q5VTB9	566 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	DARS2	Q6PI48	645 aa	Known RBP	4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	LRRC55	Q6ZSA7	311 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	LRTOMT	Q8WZ04	291 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	RNF31	Q96EP0	1072 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	P2RX7	Q99572	595 aa	Known RBP	4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	VKORC1	Q9BQB6	163 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	C22orf23	Q9BZE7	217 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	BHMT2	Q9H2M3	363 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	NRDE2	Q9H7Z3	1164 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	ATP6V0A4	Q9HBG4	840 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	GPR35	Q9HC97	309 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	PIH1D1	Q9NWS0	290 aa	Known RBP	4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	RNF181	Q9P0P0	153 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	L1RE1	Q9UN81	338 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	FAM50B	Q9Y247	325 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	MTO1	Q9Y2Z2	717 aa	Known RBP	4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	REXO2	Q9Y3B8	237 aa	Known RBP	4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	PCDHGB6	Q9Y5F9	930 aa		4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
TARDBP-208	ENST00000477447	GAGE12B	A1L429	117 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	GAGE12H	A6NDE8	117 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	UNC119B	A6NIH7	251 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	UNC5C	O95185	931 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	KIF20A	O95235	890 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	NDUFA10	O95299	355 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	CHEK2	O96017	543 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	CFI	P05156	583 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	ELANE	P08246	267 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	LAG3	P18627	525 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	ZFP36	P26651	326 aa	Known RBP	4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	PEX2	P28328	305 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	PIGF	Q07326	219 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	ZNF844	Q08AG5	666 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	TUBA3C	Q13748	450 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	LSM12	Q3MHD2	195 aa	Known RBP	4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	EMC10	Q5UCC4	262 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	TAPT1	Q6NXT6	567 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	TUBA3E	Q6PEY2	450 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	APOA5	Q6Q788	366 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	KSR2	Q6VAB6	950 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	CFAP52	Q8N1V2	620 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	SYNE4	Q8N205	404 aa		4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	NSUN7	Q8NE18	718 aa	Known RBP	4.17	□□□□□ -1.74
TARDBP-208	ENST00000477447	CPEB3	Q8NE35	698 aa	Known RBP	4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms