RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 DDX23Q9BUQ8 820 aaKnown RBP11.65□□□□□ -0.55
COL27A1-204ENST00000477421 MRIQ9BWK5 157 aa11.65□□□□□ -0.55
COL27A1-204ENST00000477421 NIF3L1Q9GZT8 377 aa11.65□□□□□ -0.55
COL27A1-204ENST00000477421 C2orf40Q9H1Z8 148 aa11.65□□□□□ -0.55
COL27A1-204ENST00000477421 CHST7Q9NS84 486 aa11.65□□□□□ -0.55
COL27A1-204ENST00000477421 HAUS2Q9NVX0 235 aa11.65□□□□□ -0.55
COL27A1-204ENST00000477421 CCDC195A0A1B0GUA6 201 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 DYNC1LI2O43237 492 aaPredicted RBP11.64□□□□□ -0.55
COL27A1-204ENST00000477421 KRT7P08729 469 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 RBP3P10745 1247 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 LCP1P13796 627 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 ATP13A4Q4VNC1 1196 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 LRIG3Q6UXM1 1119 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 ANO5Q75V66 913 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 KIF2BQ8N4N8 673 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 DCLK2Q8N568 766 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 CCHCR1Q8TD31 782 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.64□□□□□ -0.55
COL27A1-204ENST00000477421 PWWP2AQ96N64 755 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 TMEM121Q9BTD3 319 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 TMBIM4Q9HC24 238 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.64□□□□□ -0.55
COL27A1-204ENST00000477421 ASNSD1Q9NWL6 643 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 CCDC78A2IDD5 438 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 MAGEA4P43358 317 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 RASSF2P50749 326 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 TMC3Q7Z5M5 1100 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 VSIG10LQ86VR7 867 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 SIX6OS1Q8N1H7 587 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 LENG9Q96B70 501 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 CDC42EP4Q9H3Q1 356 aaKnown RBP11.64□□□□□ -0.55
COL27A1-204ENST00000477421 RAB6BQ9NRW1 208 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 CHMP2BQ9UQN3 213 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 INPP5FQ9Y2H2 1132 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 A0A0A6YYK5 440 aaPredicted RBP11.64□□□□□ -0.55
COL27A1-204ENST00000477421 CCNE2O96020 404 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 EGFRP00533 1210 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 VTNP04004 478 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 GJB1P08034 283 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 NME3Q13232 169 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 MXD4Q14582 209 aaPredicted RBP11.64□□□□□ -0.55
COL27A1-204ENST00000477421 TAF12Q16514 161 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 DLK2Q6UY11 383 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 PCGF5Q86SE9 256 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 EXOC8Q8IYI6 725 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 LRRC34Q8IZ02 419 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 TMEM161BQ8NDZ6 487 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 CFAP61Q8NHU2 1237 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 ATXN7L3BQ96GX2 97 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 P2RX7Q99572 595 aaKnown RBP11.64□□□□□ -0.55
COL27A1-204ENST00000477421 ETNK1Q9HBU6 452 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 GDF3Q9NR23 364 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 SLC5A4Q9NY91 659 aa11.64□□□□□ -0.55
COL27A1-204ENST00000477421 SPEF2Q9C093 1822 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 CDH16O75309 829 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 AGTP01019 485 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 RARBP10826 455 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 TFDP2Q14188 446 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 PSMD6Q15008 389 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 KDM7AQ6ZMT4 941 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 FAM71DQ8N9W8 422 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 SPATA18Q8TC71 538 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 SEMA4DQ92854 862 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 NACA2Q9H009 215 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 AP5M1Q9H0R1 490 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 TRABDQ9H4I3 376 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 C17orf75Q9HAS0 396 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 METTL5Q9NRN9 209 aaKnown RBP11.63□□□□□ -0.55
COL27A1-204ENST00000477421 CISHQ9NSE2 258 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 SAE1Q9UBE0 346 aaPredicted RBP11.63□□□□□ -0.55
COL27A1-204ENST00000477421 FNDC3AQ9Y2H6 1198 aaKnown RBP11.63□□□□□ -0.55
COL27A1-204ENST00000477421 MYH10P35580 1976 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 A0A1B0GUA9 196 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 CXCL8P10145 99 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 PTPRAP18433 802 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 PSMC4P43686 418 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 CORO7P57737 925 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 COBLL1Q53SF7 1204 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 NXNQ6DKJ4 435 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 ZNF606Q8WXB4 792 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 ACAP3Q96P50 834 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 DUOX1Q9NRD9 1551 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 CIB2O75838 187 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 SHBGP04278 402 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 MUTP22033 750 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 HSPA9P38646 679 aaKnown RBP11.63□□□□□ -0.55
COL27A1-204ENST00000477421 AARSP49588 968 aaKnown RBP eCLIP11.63□□□□□ -0.55
COL27A1-204ENST00000477421 DNAJC3Q13217 504 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 GJC2Q5T442 439 aaPredicted RBP11.63□□□□□ -0.55
COL27A1-204ENST00000477421 PPP1R2P3Q6NXS1 205 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 RFX8Q6ZV50 586 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 MOB2Q70IA6 237 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 CCDC125Q86Z20 511 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 MCOLN2Q8IZK6 566 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 ACTR5Q9H9F9 607 aaPredicted RBP11.63□□□□□ -0.55
COL27A1-204ENST00000477421 KLK14Q9P0G3 267 aa11.63□□□□□ -0.55
COL27A1-204ENST00000477421 KCNN4O15554 427 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 MYL3P08590 195 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 GARTP22102 1010 aa11.62□□□□□ -0.55
COL27A1-204ENST00000477421 DSG3P32926 999 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms