RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 LPPQ93052 612 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 FAM149B1Q96BN6 582 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 DACH2Q96NX9 599 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 NUDCD1Q96RS6 583 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 CDK5RAP1Q96SZ6 601 aaKnown RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 TCF25Q9BQ70 676 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 SDF4Q9BRK5 362 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 BRIP1Q9BX63 1249 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 AGXT2Q9BYV1 514 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 GCOM2Q9BZD3 368 aaPredicted RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 INTS2Q9H0H0 1204 aaKnown RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 BHMT2Q9H2M3 363 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 PIDD1Q9HB75 910 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 SLC39A1Q9NY26 324 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 ZNF148Q9UQR1 794 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 TSC22D4Q9Y3Q8 395 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 ERBINQ96RT1 1412 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 ARHGEF37A1IGU5 675 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 LRRIQ4A6NIV6 560 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 NPC1O15118 1278 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 RHOQP17081 205 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 ATP5F1P24539 256 aaPredicted RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 HOXA6P31267 233 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 CCR1P32246 355 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 IL6STP40189 918 aaPredicted RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 SERPINB8P50452 374 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 ERFP50548 548 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 OLR1P78380 273 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 DUSP4Q13115 394 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 KCNAB2Q13303 367 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 SLC14A1Q13336 389 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 NR1D2Q14995 579 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 USP39Q53GS9 565 aaKnown RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 FAM209BQ5JX69 171 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 OLFML2BQ68BL8 750 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 GRAMD4Q6IC98 578 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 RPUSD3Q6P087 351 aaKnown RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 EPM2AIP1Q7L775 607 aaPredicted RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 ZNF554Q86TJ5 538 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 TMTC1Q8IUR5 882 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 ANKS4BQ8N8V4 417 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 PIK3C3Q8NEB9 887 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 MED30Q96HR3 178 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 METTL2AQ96IZ6 378 aaKnown RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 PPP1R13BQ96KQ4 1090 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 UBXN10Q96LJ8 280 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 FBXL18Q96ME1 805 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 BTBD2Q9BX70 525 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 FRMD8P1Q9BZ68 369 aaPredicted RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 KRT23Q9C075 422 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 FAM107BQ9H098 131 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 THAP9Q9H5L6 903 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 ITM2CQ9NQX7 267 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 PLSCR4Q9NRQ2 329 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 SOX13Q9UN79 622 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 STX8Q9UNK0 236 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 KCNH4Q9UQ05 1017 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 FAM32AQ9Y421 112 aaKnown RBP6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 CCDC171Q6TFL3 1326 aa6.33□□□□□ -1.4
SPTLC3-205ENST00000476791 IFT140Q96RY7 1462 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 PNMA6FA0A0J9YX94 578 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 MAGEB16A2A368 324 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 SNTNA6NMZ2 147 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 A6NNZ2 444 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 LRRIQ3A6PVS8 624 aaPredicted RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 EBAG9O00559 213 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 WDR46O15213 610 aaKnown RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 TLR5O60602 858 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 ATP9AO75110 1047 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 DAB1O75553 588 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 TRIM16O95361 564 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 ADRB2P07550 413 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 POU2F2P09086 479 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 CLTAP09496 248 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 SNRPA1P09661 255 aaKnown RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 POLR2EP19388 210 aaKnown RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 TBXAS1P24557 533 aaPredicted RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 DSC2Q02487 901 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 COTL1Q14019 142 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 LASP1Q14847 261 aaKnown RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 MYLK3Q32MK0 819 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 XKR3Q5GH77 459 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 SPDYAQ5MJ70 313 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 PDPK2PQ6A1A2 396 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 C11orf88Q6PI97 169 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 LYSMD3Q7Z3D4 306 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 ZSCAN29Q8IWY8 852 aaPredicted RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 ADGRG2Q8IZP9 1017 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 AFAP1L2Q8N4X5 818 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 MFSD2AQ8NA29 543 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 UCMAQ8WVF2 138 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 SLC9A6Q92581 669 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 CLP1Q92989 425 aaKnown RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 FERMT2Q96AC1 680 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 LENG8Q96PV6 779 aaPredicted RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 BBS2Q9BXC9 721 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 NYXQ9GZU5 481 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 HAUS4Q9H6D7 363 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 IFT22Q9H7X7 185 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms