RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 WEE2P0C1S8 567 aa30.89■■■□□ 2.54
VEGFA-211ENST00000476772 CD58P19256 250 aa30.89■■■□□ 2.54
VEGFA-211ENST00000476772 TNFAIP3P21580 790 aa30.89■■■□□ 2.54
VEGFA-211ENST00000476772 TLE2Q04725 743 aa30.89■■■□□ 2.54
VEGFA-211ENST00000476772 SOX4Q06945 474 aaPredicted RBP30.89■■■□□ 2.54
VEGFA-211ENST00000476772 FAAP100Q0VG06 881 aa30.89■■■□□ 2.54
VEGFA-211ENST00000476772 GPNMBQ14956 572 aa30.89■■■□□ 2.54
VEGFA-211ENST00000476772 DNTTIP2Q5QJE6 756 aaKnown RBP30.89■■■□□ 2.54
VEGFA-211ENST00000476772 C1orf53Q5VUE5 145 aa30.89■■■□□ 2.54
VEGFA-211ENST00000476772 TAF3Q5VWG9 929 aa30.89■■■□□ 2.54
VEGFA-211ENST00000476772 C9orf57Q5W0N0 161 aa30.89■■■□□ 2.54
VEGFA-211ENST00000476772 RPUSD2Q8IZ73 545 aaKnown RBP30.89■■■□□ 2.54
VEGFA-211ENST00000476772 RBBP8NLQ8NC74 664 aaPredicted RBP30.89■■■□□ 2.54
VEGFA-211ENST00000476772 PPP1R10Q96QC0 940 aaKnown RBP30.89■■■□□ 2.54
VEGFA-211ENST00000476772 BCO2Q9BYV7 579 aa30.89■■■□□ 2.54
VEGFA-211ENST00000476772 RGS18Q9NS28 235 aa30.89■■■□□ 2.54
VEGFA-211ENST00000476772 CISHQ9NSE2 258 aa30.89■■■□□ 2.54
VEGFA-211ENST00000476772 TANC1Q9C0D5 1861 aa30.89■■■□□ 2.53
VEGFA-211ENST00000476772 RAP1GAPP47736 663 aa30.88■■■□□ 2.53
VEGFA-211ENST00000476772 CCDC122Q5T0U0 273 aa30.88■■■□□ 2.53
VEGFA-211ENST00000476772 ALKBH5Q6P6C2 394 aaKnown RBP30.88■■■□□ 2.53
VEGFA-211ENST00000476772 ZNF662Q6ZS27 426 aa30.88■■■□□ 2.53
VEGFA-211ENST00000476772 RTN4RL1Q86UN2 441 aaPredicted RBP30.88■■■□□ 2.53
VEGFA-211ENST00000476772 GSTCDQ8NEC7 633 aa30.88■■■□□ 2.53
VEGFA-211ENST00000476772 LINC01599Q8WXQ3 324 aa30.88■■■□□ 2.53
VEGFA-211ENST00000476772 FAXDC2Q96IV6 333 aa30.88■■■□□ 2.53
VEGFA-211ENST00000476772 TOX2Q96NM4 488 aa30.88■■■□□ 2.53
VEGFA-211ENST00000476772 RPS6KC1Q96S38 1066 aa30.88■■■□□ 2.53
VEGFA-211ENST00000476772 GOLGA2P5Q9HBQ8 144 aa30.88■■■□□ 2.53
VEGFA-211ENST00000476772 SEPT11Q9NVA2 429 aaKnown RBP30.88■■■□□ 2.53
VEGFA-211ENST00000476772 SCN1AP35498 2009 aa30.88■■■□□ 2.53
VEGFA-211ENST00000476772 ANO9A1A5B4 782 aa30.87■■■□□ 2.53
VEGFA-211ENST00000476772 SKIP12755 728 aa30.87■■■□□ 2.53
VEGFA-211ENST00000476772 CHRNB2P17787 502 aa30.87■■■□□ 2.53
VEGFA-211ENST00000476772 CYP3A5P20815 502 aa30.87■■■□□ 2.53
VEGFA-211ENST00000476772 AFF1P51825 1210 aaKnown RBP30.87■■■□□ 2.53
VEGFA-211ENST00000476772 ECHDC2Q86YB7 292 aa30.87■■■□□ 2.53
VEGFA-211ENST00000476772 SDCBP2Q9H190 292 aa30.87■■■□□ 2.53
VEGFA-211ENST00000476772 HIPK3Q9H422 1215 aa30.87■■■□□ 2.53
VEGFA-211ENST00000476772 SMYD3Q9H7B4 428 aa30.87■■■□□ 2.53
VEGFA-211ENST00000476772 ARL5CA6NH57 179 aa30.87■■■□□ 2.53
VEGFA-211ENST00000476772 MYO1EQ12965 1108 aa30.87■■■□□ 2.53
VEGFA-211ENST00000476772 NAB2Q15742 525 aa30.87■■■□□ 2.53
VEGFA-211ENST00000476772 PALB2Q86YC2 1186 aa30.87■■■□□ 2.53
VEGFA-211ENST00000476772 LRRC52Q8N7C0 313 aa30.87■■■□□ 2.53
VEGFA-211ENST00000476772 DDX1Q92499 740 aaKnown RBP30.87■■■□□ 2.53
VEGFA-211ENST00000476772 PGBD4Q96DM1 585 aa30.87■■■□□ 2.53
VEGFA-211ENST00000476772 LUC7LQ9NQ29 371 aaKnown RBP30.87■■■□□ 2.53
VEGFA-211ENST00000476772 MMEP08473 750 aa30.86■■■□□ 2.53
VEGFA-211ENST00000476772 P4HA1P13674 534 aa30.86■■■□□ 2.53
VEGFA-211ENST00000476772 ZNF132P52740 706 aa30.86■■■□□ 2.53
VEGFA-211ENST00000476772 PAWRQ96IZ0 340 aaKnown RBP30.86■■■□□ 2.53
VEGFA-211ENST00000476772 PACSIN1Q9BY11 444 aa30.86■■■□□ 2.53
VEGFA-211ENST00000476772 IRX2Q9BZI1 471 aaPredicted RBP30.86■■■□□ 2.53
VEGFA-211ENST00000476772 C11orf49Q9H6J7 331 aa30.86■■■□□ 2.53
VEGFA-211ENST00000476772 RSAD1Q9HA92 442 aa30.86■■■□□ 2.53
VEGFA-211ENST00000476772 MIOSQ9NXC5 875 aa30.86■■■□□ 2.53
VEGFA-211ENST00000476772 GUCA1BQ9UMX6 200 aa30.86■■■□□ 2.53
VEGFA-211ENST00000476772 ATP11BQ9Y2G3 1177 aa30.86■■■□□ 2.53
VEGFA-211ENST00000476772 C9IYK1 514 aa30.85■■■□□ 2.53
VEGFA-211ENST00000476772 PIRO00625 290 aa30.85■■■□□ 2.53
VEGFA-211ENST00000476772 CDH8P55286 799 aa30.85■■■□□ 2.53
VEGFA-211ENST00000476772 BPIFB4P59827 614 aa30.85■■■□□ 2.53
VEGFA-211ENST00000476772 YWHAEP62258 255 aaKnown RBP30.85■■■□□ 2.53
VEGFA-211ENST00000476772 TNNC1P63316 161 aa30.85■■■□□ 2.53
VEGFA-211ENST00000476772 FMO1Q01740 532 aa30.85■■■□□ 2.53
VEGFA-211ENST00000476772 CDR2Q01850 454 aa30.85■■■□□ 2.53
VEGFA-211ENST00000476772 KIF5AQ12840 1032 aa30.85■■■□□ 2.53
VEGFA-211ENST00000476772 ZNF598Q86UK7 904 aaKnown RBP30.85■■■□□ 2.53
VEGFA-211ENST00000476772 DNAAF5Q86Y56 855 aa30.85■■■□□ 2.53
VEGFA-211ENST00000476772 FTHL17Q9BXU8 183 aa30.85■■■□□ 2.53
VEGFA-211ENST00000476772 PPP1R12CQ9BZL4 782 aa30.85■■■□□ 2.53
VEGFA-211ENST00000476772 KRT86O43790 486 aa30.84■■■□□ 2.53
VEGFA-211ENST00000476772 SCNN1GP51170 649 aa30.84■■■□□ 2.53
VEGFA-211ENST00000476772 PLEKHG4Q58EX7 1191 aa30.84■■■□□ 2.53
VEGFA-211ENST00000476772 C10orf76Q5T2E6 689 aa30.84■■■□□ 2.53
VEGFA-211ENST00000476772 SCLYQ96I15 445 aa30.84■■■□□ 2.53
VEGFA-211ENST00000476772 TSGA10Q9BZW7 698 aa30.84■■■□□ 2.53
VEGFA-211ENST00000476772 DUSP10Q9Y6W6 482 aa30.84■■■□□ 2.53
VEGFA-211ENST00000476772 KIF2AO00139 706 aaPredicted RBP30.84■■■□□ 2.53
VEGFA-211ENST00000476772 PJA2O43164 708 aa30.84■■■□□ 2.53
VEGFA-211ENST00000476772 THP07101 528 aa30.84■■■□□ 2.53
VEGFA-211ENST00000476772 SLC24A5Q71RS6 500 aa30.84■■■□□ 2.53
VEGFA-211ENST00000476772 DBF4BQ8NFT6 615 aa30.84■■■□□ 2.53
VEGFA-211ENST00000476772 PCDHB18PQ96TA0 734 aa30.84■■■□□ 2.53
VEGFA-211ENST00000476772 WNT8AQ9H1J5 351 aa30.84■■■□□ 2.53
VEGFA-211ENST00000476772 TSPYL2Q9H2G4 693 aaPredicted RBP30.84■■■□□ 2.53
VEGFA-211ENST00000476772 CYP3A43Q9HB55 503 aa30.84■■■□□ 2.53
VEGFA-211ENST00000476772 SLC38A7Q9NVC3 462 aa30.84■■■□□ 2.53
VEGFA-211ENST00000476772 SCN5AQ14524 2016 aa30.83■■■□□ 2.53
VEGFA-211ENST00000476772 LRPAP1P30533 357 aa30.83■■■□□ 2.53
VEGFA-211ENST00000476772 GNA15P30679 374 aa30.83■■■□□ 2.53
VEGFA-211ENST00000476772 CCL23P55773 120 aa30.83■■■□□ 2.53
VEGFA-211ENST00000476772 ETF1P62495 437 aaKnown RBP30.83■■■□□ 2.53
VEGFA-211ENST00000476772 ZNF394Q53GI3 561 aa30.83■■■□□ 2.53
VEGFA-211ENST00000476772 TXLNBQ8N3L3 684 aa30.83■■■□□ 2.53
VEGFA-211ENST00000476772 TAS2R14Q9NYV8 317 aa30.83■■■□□ 2.53
VEGFA-211ENST00000476772 TMCO5BA8MYB1 307 aa30.82■■■□□ 2.52
VEGFA-211ENST00000476772 SYT10Q6XYQ8 523 aa30.82■■■□□ 2.52
VEGFA-211ENST00000476772 ZNF560Q96MR9 790 aa30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms