RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 FBXO6Q9NRD1 293 aaPredicted RBP14.6□□□□□ -0.07
HDAC1-206ENST00000476391 GCNT4Q9P109 453 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 SLC7A8Q9UHI5 535 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.6□□□□□ -0.07
HDAC1-206ENST00000476391 MAGEB6P1A0A0J9YX57 407 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 ZBED4O75132 1171 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 STK10O94804 968 aaKnown RBP14.6□□□□□ -0.07
HDAC1-206ENST00000476391 CAMTA2O94983 1202 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 ATF2P15336 505 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 POLD1P28340 1107 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 GCAP28676 217 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 AQP4P55087 323 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 RASA2Q15283 850 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 DLGAP5Q15398 846 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 HEATR3Q7Z4Q2 680 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 METTL25Q8N6Q8 603 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 DDI1Q8WTU0 396 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 CD101Q93033 1021 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 TEKT1Q969V4 418 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 DHRS1Q96LJ7 313 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 FOXP3Q9BZS1 431 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 SENP6Q9GZR1 1112 aaPredicted RBP14.6□□□□□ -0.07
HDAC1-206ENST00000476391 PLGRKTQ9HBL7 147 aa14.6□□□□□ -0.07
HDAC1-206ENST00000476391 H3BRJ5 948 aa14.59□□□□□ -0.07
HDAC1-206ENST00000476391 PEX1O43933 1283 aa14.59□□□□□ -0.07
HDAC1-206ENST00000476391 CYP7A1P22680 504 aa14.59□□□□□ -0.07
HDAC1-206ENST00000476391 PCSK6P29122 969 aa14.59□□□□□ -0.07
HDAC1-206ENST00000476391 SLC5A2P31639 672 aa14.59□□□□□ -0.07
HDAC1-206ENST00000476391 KIF22Q14807 665 aa14.59□□□□□ -0.07
HDAC1-206ENST00000476391 DHRS4L2Q6PKH6 230 aa14.59□□□□□ -0.07
HDAC1-206ENST00000476391 FAM186BQ8IYM0 893 aa14.59□□□□□ -0.07
HDAC1-206ENST00000476391 SNX29Q8TEQ0 813 aa14.59□□□□□ -0.07
HDAC1-206ENST00000476391 MXD3Q9BW11 206 aa14.59□□□□□ -0.07
HDAC1-206ENST00000476391 TMEM120AQ9BXJ8 343 aa14.59□□□□□ -0.07
HDAC1-206ENST00000476391 FGFBP2Q9BYJ0 223 aa14.59□□□□□ -0.07
HDAC1-206ENST00000476391 VPS11Q9H270 941 aa14.59□□□□□ -0.07
HDAC1-206ENST00000476391 LRP2BPQ9P2M1 347 aa14.59□□□□□ -0.07
HDAC1-206ENST00000476391 AK5Q9Y6K8 562 aa14.59□□□□□ -0.07
HDAC1-206ENST00000476391 MYH11P35749 1972 aa14.59□□□□□ -0.07
HDAC1-206ENST00000476391 MROH5Q6ZUA9 1318 aa14.59□□□□□ -0.07
HDAC1-206ENST00000476391 GSTTP1A0A1W2PQM5 241 aa14.58□□□□□ -0.07
HDAC1-206ENST00000476391 DENRO43583 198 aaKnown RBP14.58□□□□□ -0.07
HDAC1-206ENST00000476391 NMT2O60551 498 aa14.58□□□□□ -0.07
HDAC1-206ENST00000476391 CSDE1O75534 798 aaKnown RBP14.58□□□□□ -0.07
HDAC1-206ENST00000476391 GCP02774 474 aa14.58□□□□□ -0.07
HDAC1-206ENST00000476391 TNFAIP3P21580 790 aa14.58□□□□□ -0.07
HDAC1-206ENST00000476391 COMTP21964 271 aa14.58□□□□□ -0.07
HDAC1-206ENST00000476391 OVGP1Q12889 678 aa14.58□□□□□ -0.07
HDAC1-206ENST00000476391 PKN2Q16513 984 aaKnown RBP14.58□□□□□ -0.07
HDAC1-206ENST00000476391 MYLK3Q32MK0 819 aa14.58□□□□□ -0.07
HDAC1-206ENST00000476391 KCNK18Q7Z418 384 aa14.58□□□□□ -0.07
HDAC1-206ENST00000476391 DGKHQ86XP1 1220 aa14.58□□□□□ -0.07
HDAC1-206ENST00000476391 ERI1Q8IV48 349 aaKnown RBP14.58□□□□□ -0.07
HDAC1-206ENST00000476391 C4orf33Q8N1A6 199 aa14.58□□□□□ -0.07
HDAC1-206ENST00000476391 LARGE2Q8N3Y3 721 aa14.58□□□□□ -0.07
HDAC1-206ENST00000476391 ALLCQ8N6M5 410 aa14.58□□□□□ -0.07
HDAC1-206ENST00000476391 RBM15BQ8NDT2 890 aaKnown RBP14.58□□□□□ -0.07
HDAC1-206ENST00000476391 PRR11Q96HE9 360 aaPredicted RBP14.58□□□□□ -0.07
HDAC1-206ENST00000476391 C9orf72Q96LT7 481 aa14.58□□□□□ -0.07
HDAC1-206ENST00000476391 PLVAPQ9BX97 442 aa14.58□□□□□ -0.07
HDAC1-206ENST00000476391 KCNK13Q9HB14 408 aa14.58□□□□□ -0.07
HDAC1-206ENST00000476391 POLIQ9UNA4 740 aa14.58□□□□□ -0.07
HDAC1-206ENST00000476391 LZTS1Q9Y250 596 aa14.58□□□□□ -0.07
HDAC1-206ENST00000476391 NEU2Q9Y3R4 380 aa14.58□□□□□ -0.07
HDAC1-206ENST00000476391 FAM32AQ9Y421 112 aaKnown RBP14.58□□□□□ -0.07
HDAC1-206ENST00000476391 TBX22Q9Y458 520 aa14.58□□□□□ -0.07
HDAC1-206ENST00000476391 NUB1Q9Y5A7 615 aa14.58□□□□□ -0.07
HDAC1-206ENST00000476391 FBP2O00757 339 aa14.58□□□□□ -0.08
HDAC1-206ENST00000476391 FCHO1O14526 889 aa14.58□□□□□ -0.08
HDAC1-206ENST00000476391 ZBED1O96006 694 aa14.58□□□□□ -0.08
HDAC1-206ENST00000476391 PIK3CAP42336 1068 aa14.58□□□□□ -0.08
HDAC1-206ENST00000476391 CALCRLQ16602 461 aa14.58□□□□□ -0.08
HDAC1-206ENST00000476391 SGO2Q562F6 1265 aa14.58□□□□□ -0.08
HDAC1-206ENST00000476391 ZNF276Q8N554 614 aa14.58□□□□□ -0.08
HDAC1-206ENST00000476391 OXNAD1Q96HP4 312 aaPredicted RBP14.58□□□□□ -0.08
HDAC1-206ENST00000476391 BIRC8Q96P09 236 aa14.58□□□□□ -0.08
HDAC1-206ENST00000476391 C1orf21Q9H246 121 aa14.58□□□□□ -0.08
HDAC1-206ENST00000476391 MANSC1Q9H8J5 431 aa14.58□□□□□ -0.08
HDAC1-206ENST00000476391 TNS3Q68CZ2 1445 aa14.58□□□□□ -0.08
HDAC1-206ENST00000476391 CYP2D7A0A087X1C5 515 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 FSCN2O14926 492 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 DLDP09622 509 aaKnown RBP14.57□□□□□ -0.08
HDAC1-206ENST00000476391 GNA11P29992 359 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 CABP4P57796 275 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 FOLH1Q04609 750 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 DCAF17Q5H9S7 520 aaPredicted RBP14.57□□□□□ -0.08
HDAC1-206ENST00000476391 PCNX4Q63HM2 1172 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 GJB7Q6PEY0 223 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 NANOGNBQ7Z5D8 188 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 PRUNE1Q86TP1 453 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 ZNF410Q86VK4 478 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 SCAIQ8N9R8 606 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 ICA1LQ8NDH6 482 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 THTPAQ9BU02 230 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 TSSK1BQ9BXA7 367 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 TBC1D7Q9P0N9 293 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 UVRAGQ9P2Y5 699 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 LAMB1P07942 1786 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 ROBO3Q96MS0 1386 aa14.57□□□□□ -0.08
HDAC1-206ENST00000476391 CAPN14A8MX76 684 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms