RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 CXCL14O95715 111 aa15.53■□□□□ 0.08
CCNL1-217ENST00000476367 CST3P01034 146 aaPredicted RBP15.53■□□□□ 0.08
CCNL1-217ENST00000476367 ITGB3P05106 788 aa15.53■□□□□ 0.08
CCNL1-217ENST00000476367 EPB41P11171 864 aaKnown RBP15.53■□□□□ 0.08
CCNL1-217ENST00000476367 TNNI1P19237 187 aa15.53■□□□□ 0.08
CCNL1-217ENST00000476367 GTF2F1P35269 517 aaKnown RBP eCLIP15.53■□□□□ 0.08
CCNL1-217ENST00000476367 NRIP1P48552 1158 aa15.53■□□□□ 0.08
CCNL1-217ENST00000476367 BMS1Q14692 1282 aaKnown RBP15.53■□□□□ 0.08
CCNL1-217ENST00000476367 PTPN14Q15678 1187 aa15.53■□□□□ 0.08
CCNL1-217ENST00000476367 CBWD6Q4V339 395 aa15.53■□□□□ 0.08
CCNL1-217ENST00000476367 CBWD3Q5JTY5 395 aa15.53■□□□□ 0.08
CCNL1-217ENST00000476367 MIIPQ5JXC2 388 aa15.53■□□□□ 0.08
CCNL1-217ENST00000476367 CBWD5Q5RIA9 395 aa15.53■□□□□ 0.08
CCNL1-217ENST00000476367 TDRD10Q5VZ19 366 aaKnown RBP15.53■□□□□ 0.08
CCNL1-217ENST00000476367 C9orf57Q5W0N0 161 aa15.53■□□□□ 0.08
CCNL1-217ENST00000476367 PDE12Q6L8Q7 609 aaKnown RBP15.53■□□□□ 0.08
CCNL1-217ENST00000476367 PPP2R3CQ969Q6 453 aa15.53■□□□□ 0.08
CCNL1-217ENST00000476367 ANKRD36BP1Q96IX9 119 aa15.53■□□□□ 0.08
CCNL1-217ENST00000476367 TSPY26PQ9H489 355 aa15.53■□□□□ 0.08
CCNL1-217ENST00000476367 IGFLR1Q9H665 355 aa15.53■□□□□ 0.08
CCNL1-217ENST00000476367 ARMCX3Q9UH62 379 aaPredicted RBP15.53■□□□□ 0.08
CCNL1-217ENST00000476367 PLXNA3P51805 1871 aa15.53■□□□□ 0.08
CCNL1-217ENST00000476367 SPTBN5Q9NRC6 3674 aaKnown RBP15.52■□□□□ 0.08
CCNL1-217ENST00000476367 BRWD1Q9NSI6 2320 aa15.52■□□□□ 0.08
CCNL1-217ENST00000476367 PIRO00625 290 aa15.52■□□□□ 0.08
CCNL1-217ENST00000476367 PER2O15055 1255 aa15.52■□□□□ 0.08
CCNL1-217ENST00000476367 TKTP29401 623 aaKnown RBP15.52■□□□□ 0.08
CCNL1-217ENST00000476367 POLR2BP30876 1174 aaKnown RBP15.52■□□□□ 0.08
CCNL1-217ENST00000476367 ELAVL2Q12926 359 aaKnown RBP15.52■□□□□ 0.08
CCNL1-217ENST00000476367 USP41Q3LFD5 358 aa15.52■□□□□ 0.08
CCNL1-217ENST00000476367 ZACNQ401N2 412 aa15.52■□□□□ 0.08
CCNL1-217ENST00000476367 TCP11X2Q5H9J9 407 aa15.52■□□□□ 0.08
CCNL1-217ENST00000476367 RTP2Q5QGT7 225 aa15.52■□□□□ 0.08
CCNL1-217ENST00000476367 SV2AQ7L0J3 742 aa15.52■□□□□ 0.08
CCNL1-217ENST00000476367 FAM200AQ8TCP9 573 aa15.52■□□□□ 0.08
CCNL1-217ENST00000476367 CACTINQ8WUQ7 758 aaKnown RBP15.52■□□□□ 0.08
CCNL1-217ENST00000476367 RIN2Q8WYP3 895 aaPredicted RBP15.52■□□□□ 0.08
CCNL1-217ENST00000476367 ELMO3Q96BJ8 720 aa15.52■□□□□ 0.08
CCNL1-217ENST00000476367 TLE6Q9H808 572 aa15.52■□□□□ 0.08
CCNL1-217ENST00000476367 MRPL17Q9NRX2 175 aaKnown RBP15.52■□□□□ 0.08
CCNL1-217ENST00000476367 STK39Q9UEW8 545 aa15.52■□□□□ 0.08
CCNL1-217ENST00000476367 C2orf71A6NGG8 1288 aa15.51■□□□□ 0.07
CCNL1-217ENST00000476367 LRRC10BA6NIK2 292 aa15.51■□□□□ 0.07
CCNL1-217ENST00000476367 SPTLC1O15269 473 aa15.51■□□□□ 0.07
CCNL1-217ENST00000476367 TRAPPC3O43617 180 aa15.51■□□□□ 0.07
CCNL1-217ENST00000476367 TNNC2P02585 160 aa15.51■□□□□ 0.07
CCNL1-217ENST00000476367 KRT19P08727 400 aa15.51■□□□□ 0.07
CCNL1-217ENST00000476367 GCLMP48507 274 aa15.51■□□□□ 0.07
CCNL1-217ENST00000476367 HYAL1Q12794 435 aa15.51■□□□□ 0.07
CCNL1-217ENST00000476367 PRSS55Q6UWB4 352 aaPredicted RBP15.51■□□□□ 0.07
CCNL1-217ENST00000476367 EP400NLQ6ZTU2 488 aa15.51■□□□□ 0.07
CCNL1-217ENST00000476367 TRAPPC11Q7Z392 1133 aa15.51■□□□□ 0.07
CCNL1-217ENST00000476367 MRPL43Q8N983 215 aaKnown RBP15.51■□□□□ 0.07
CCNL1-217ENST00000476367 NAT10Q9H0A0 1025 aaKnown RBP15.51■□□□□ 0.07
CCNL1-217ENST00000476367 KCNJ18B7U540 433 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 GNA14O95837 355 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 DSG1Q02413 1049 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 KCNJ12Q14500 433 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 DUOXA2Q1HG44 320 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.5■□□□□ 0.07
CCNL1-217ENST00000476367 GLYCTKQ8IVS8 523 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 SEMA4DQ92854 862 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 TTPALQ9BTX7 342 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 XYLT2Q9H1B5 865 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 RBSNQ9H1K0 784 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 METTL14Q9HCE5 456 aaKnown RBP15.5■□□□□ 0.07
CCNL1-217ENST00000476367 CHST7Q9NS84 486 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 ITGA11Q9UKX5 1188 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 AGAP1Q9UPQ3 857 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 CAVIN2O95810 425 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 KRT13P13646 458 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 RPL17P18621 184 aaKnown RBP15.5■□□□□ 0.07
CCNL1-217ENST00000476367 KCNH2Q12809 1159 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 KRT31Q15323 416 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 PSMD5Q16401 504 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 CCDC40Q4G0X9 1142 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 DCAF17Q5H9S7 520 aaPredicted RBP15.5■□□□□ 0.07
CCNL1-217ENST00000476367 LMO3Q8TAP4 145 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 SUSD3Q96L08 255 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 ZNF560Q96MR9 790 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 COQ4Q9Y3A0 265 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 IRAK3Q9Y616 596 aa15.5■□□□□ 0.07
CCNL1-217ENST00000476367 LINC01565O15544 149 aa15.49■□□□□ 0.07
CCNL1-217ENST00000476367 CLSTN1O94985 981 aa15.49■□□□□ 0.07
CCNL1-217ENST00000476367 FGFR1OPO95684 399 aaKnown RBP15.49■□□□□ 0.07
CCNL1-217ENST00000476367 CNPP09543 421 aaKnown RBP15.49■□□□□ 0.07
CCNL1-217ENST00000476367 FGFR3P22607 806 aa15.49■□□□□ 0.07
CCNL1-217ENST00000476367 FMO5P49326 533 aa15.49■□□□□ 0.07
CCNL1-217ENST00000476367 AARSP49588 968 aaKnown RBP eCLIP15.49■□□□□ 0.07
CCNL1-217ENST00000476367 TAF6P49848 677 aa15.49■□□□□ 0.07
CCNL1-217ENST00000476367 LILRA4P59901 499 aa15.49■□□□□ 0.07
CCNL1-217ENST00000476367 RBM10P98175 930 aaKnown RBP15.49■□□□□ 0.07
CCNL1-217ENST00000476367 BIRC3Q13489 604 aa15.49■□□□□ 0.07
CCNL1-217ENST00000476367 DUSP6Q16828 381 aa15.49■□□□□ 0.07
CCNL1-217ENST00000476367 TPD52L1Q16890 204 aaPredicted RBP15.49■□□□□ 0.07
CCNL1-217ENST00000476367 KIAA0319Q5VV43 1072 aa15.49■□□□□ 0.07
CCNL1-217ENST00000476367 DPY19L2P1Q6NXN4 242 aa15.49■□□□□ 0.07
CCNL1-217ENST00000476367 LLGL2Q6P1M3 1020 aa15.49■□□□□ 0.07
CCNL1-217ENST00000476367 DSTYKQ6XUX3 929 aa15.49■□□□□ 0.07
CCNL1-217ENST00000476367 RNF214Q8ND24 703 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms