RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 EPHA5P54756 1037 aa22.34■■□□□ 1.17
VPS36-203ENST00000475375 DMWDQ09019 674 aa22.34■■□□□ 1.17
VPS36-203ENST00000475375 GAS6Q14393 721 aa22.34■■□□□ 1.17
VPS36-203ENST00000475375 PRR23CQ6ZRP0 262 aa22.34■■□□□ 1.17
VPS36-203ENST00000475375 CEP68Q76N32 757 aa22.34■■□□□ 1.17
VPS36-203ENST00000475375 TAS1R3Q7RTX0 852 aa22.34■■□□□ 1.17
VPS36-203ENST00000475375 SHKBP1Q8TBC3 707 aa22.34■■□□□ 1.17
VPS36-203ENST00000475375 SNX29Q8TEQ0 813 aa22.34■■□□□ 1.17
VPS36-203ENST00000475375 C8orf76Q96K31 380 aa22.34■■□□□ 1.17
VPS36-203ENST00000475375 DRC1Q96MC2 740 aa22.34■■□□□ 1.17
VPS36-203ENST00000475375 PGLYRP2Q96PD5 576 aa22.34■■□□□ 1.17
VPS36-203ENST00000475375 ARHGAP28Q9P2N2 729 aa22.34■■□□□ 1.17
VPS36-203ENST00000475375 DNM3Q9UQ16 869 aa22.34■■□□□ 1.17
VPS36-203ENST00000475375 RBM19Q9Y4C8 960 aaKnown RBP22.34■■□□□ 1.17
VPS36-203ENST00000475375 COL4A2P08572 1712 aa22.34■■□□□ 1.17
VPS36-203ENST00000475375 CHD8Q9HCK8 2581 aa22.34■■□□□ 1.17
VPS36-203ENST00000475375 A0A1W2PRU2 124 aa22.33■■□□□ 1.17
VPS36-203ENST00000475375 SLC16A4O15374 487 aa22.33■■□□□ 1.17
VPS36-203ENST00000475375 HRO43593 1189 aa22.33■■□□□ 1.17
VPS36-203ENST00000475375 SOX9P48436 509 aa22.33■■□□□ 1.17
VPS36-203ENST00000475375 FXR2P51116 673 aaKnown RBP eCLIP22.33■■□□□ 1.17
VPS36-203ENST00000475375 NEK4P51957 841 aa22.33■■□□□ 1.17
VPS36-203ENST00000475375 YWHAHQ04917 246 aaPredicted RBP22.33■■□□□ 1.17
VPS36-203ENST00000475375 STRN3Q13033 797 aa22.33■■□□□ 1.17
VPS36-203ENST00000475375 PTGDRQ13258 359 aa22.33■■□□□ 1.17
VPS36-203ENST00000475375 CSRP2Q16527 193 aa22.33■■□□□ 1.17
VPS36-203ENST00000475375 SEZ6Q53EL9 994 aa22.33■■□□□ 1.17
VPS36-203ENST00000475375 C1orf228Q6PIY5 440 aa22.33■■□□□ 1.17
VPS36-203ENST00000475375 GPIHBP1Q8IV16 184 aa22.33■■□□□ 1.17
VPS36-203ENST00000475375 DAW1Q8N136 415 aa22.33■■□□□ 1.17
VPS36-203ENST00000475375 TTC8Q8TAM2 541 aa22.33■■□□□ 1.17
VPS36-203ENST00000475375 MSANTD3Q96H12 275 aa22.33■■□□□ 1.17
VPS36-203ENST00000475375 C8orf33Q9H7E9 229 aaPredicted RBP22.33■■□□□ 1.17
VPS36-203ENST00000475375 TUBGCP4Q9UGJ1 667 aa22.33■■□□□ 1.17
VPS36-203ENST00000475375 TIMM13Q9Y5L4 95 aaPredicted RBP22.33■■□□□ 1.17
VPS36-203ENST00000475375 ARNTLO00327 626 aa22.32■■□□□ 1.16
VPS36-203ENST00000475375 DPYSL4O14531 572 aa22.32■■□□□ 1.16
VPS36-203ENST00000475375 CHADO15335 359 aa22.32■■□□□ 1.16
VPS36-203ENST00000475375 PROZP22891 400 aa22.32■■□□□ 1.16
VPS36-203ENST00000475375 MATR3P43243 847 aaKnown RBP eCLIP22.32■■□□□ 1.16
VPS36-203ENST00000475375 EPHB3P54753 998 aa22.32■■□□□ 1.16
VPS36-203ENST00000475375 PLD1Q13393 1074 aa22.32■■□□□ 1.16
VPS36-203ENST00000475375 Q6ZS52 159 aa22.32■■□□□ 1.16
VPS36-203ENST00000475375 LONP2Q86WA8 852 aa22.32■■□□□ 1.16
VPS36-203ENST00000475375 RSPRY1Q96DX4 576 aa22.32■■□□□ 1.16
VPS36-203ENST00000475375 ZBTB45Q96K62 511 aaPredicted RBP22.32■■□□□ 1.16
VPS36-203ENST00000475375 RAB34Q9BZG1 259 aa22.32■■□□□ 1.16
VPS36-203ENST00000475375 FOXP1Q9H334 677 aaPredicted RBP22.32■■□□□ 1.16
VPS36-203ENST00000475375 NOL7Q9UMY1 257 aaKnown RBP22.32■■□□□ 1.16
VPS36-203ENST00000475375 STK24Q9Y6E0 443 aa22.32■■□□□ 1.16
VPS36-203ENST00000475375 MAP1BP46821 2468 aaKnown RBP22.31■■□□□ 1.16
VPS36-203ENST00000475375 E9PMD0 336 aa22.31■■□□□ 1.16
VPS36-203ENST00000475375 ABLIM1O14639 778 aa22.31■■□□□ 1.16
VPS36-203ENST00000475375 MEFVO15553 781 aaPredicted RBP22.31■■□□□ 1.16
VPS36-203ENST00000475375 OR4Q2P0C623 313 aa22.31■■□□□ 1.16
VPS36-203ENST00000475375 CNR2P34972 360 aa22.31■■□□□ 1.16
VPS36-203ENST00000475375 ALDH1A3P47895 512 aa22.31■■□□□ 1.16
VPS36-203ENST00000475375 MLLT6P55198 1093 aaPredicted RBP22.31■■□□□ 1.16
VPS36-203ENST00000475375 NBR1Q14596 966 aa22.31■■□□□ 1.16
VPS36-203ENST00000475375 NOLC1Q14978 699 aaKnown RBP eCLIP22.31■■□□□ 1.16
VPS36-203ENST00000475375 USP37Q86T82 979 aa22.31■■□□□ 1.16
VPS36-203ENST00000475375 RUSC1Q9BVN2 902 aa22.31■■□□□ 1.16
VPS36-203ENST00000475375 SFI1A8K8P3 1242 aa22.3■■□□□ 1.16
VPS36-203ENST00000475375 GDF9O60383 454 aa22.3■■□□□ 1.16
VPS36-203ENST00000475375 SPAG1Q07617 926 aa22.3■■□□□ 1.16
VPS36-203ENST00000475375 DUSP4Q13115 394 aa22.3■■□□□ 1.16
VPS36-203ENST00000475375 SLC10A6Q3KNW5 377 aa22.3■■□□□ 1.16
VPS36-203ENST00000475375 STXBP5Q5T5C0 1151 aa22.3■■□□□ 1.16
VPS36-203ENST00000475375 HAUS6Q7Z4H7 955 aa22.3■■□□□ 1.16
VPS36-203ENST00000475375 CITO14578 2027 aa22.3■■□□□ 1.16
VPS36-203ENST00000475375 SPECC1L-ADORA2AF8WAN1 911 aa22.29■■□□□ 1.16
VPS36-203ENST00000475375 K7ESF4 209 aa22.29■■□□□ 1.16
VPS36-203ENST00000475375 TOM1L1O75674 476 aa22.29■■□□□ 1.16
VPS36-203ENST00000475375 CXCL8P10145 99 aa22.29■■□□□ 1.16
VPS36-203ENST00000475375 FCHO2Q0JRZ9 810 aa22.29■■□□□ 1.16
VPS36-203ENST00000475375 ST3GAL1Q11201 340 aa22.29■■□□□ 1.16
VPS36-203ENST00000475375 PDIA5Q14554 519 aa22.29■■□□□ 1.16
VPS36-203ENST00000475375 DGKKQ5KSL6 1271 aa22.29■■□□□ 1.16
VPS36-203ENST00000475375 KRT79Q5XKE5 535 aa22.29■■□□□ 1.16
VPS36-203ENST00000475375 DSTYKQ6XUX3 929 aa22.29■■□□□ 1.16
VPS36-203ENST00000475375 ARID3BQ8IVW6 561 aaPredicted RBP22.29■■□□□ 1.16
VPS36-203ENST00000475375 TMEM130Q8N3G9 435 aa22.29■■□□□ 1.16
VPS36-203ENST00000475375 ZFYVE19Q96K21 471 aa22.29■■□□□ 1.16
VPS36-203ENST00000475375 C17orf75Q9HAS0 396 aa22.29■■□□□ 1.16
VPS36-203ENST00000475375 M0QZQ0 153 aa22.28■■□□□ 1.16
VPS36-203ENST00000475375 FOXD2O60548 495 aaPredicted RBP22.28■■□□□ 1.16
VPS36-203ENST00000475375 OAZ2O95190 189 aa22.28■■□□□ 1.16
VPS36-203ENST00000475375 CTHP32929 405 aa22.28■■□□□ 1.16
VPS36-203ENST00000475375 TRAPPC10P48553 1259 aa22.28■■□□□ 1.16
VPS36-203ENST00000475375 RAD51AP2Q09MP3 1159 aa22.28■■□□□ 1.16
VPS36-203ENST00000475375 MAPK7Q13164 816 aa22.28■■□□□ 1.16
VPS36-203ENST00000475375 PON2Q15165 354 aa22.28■■□□□ 1.16
VPS36-203ENST00000475375 ZRSR1Q15695 479 aaKnown RBP22.28■■□□□ 1.16
VPS36-203ENST00000475375 AASDHQ4L235 1098 aaPredicted RBP22.28■■□□□ 1.16
VPS36-203ENST00000475375 IL31Q6EBC2 164 aa22.28■■□□□ 1.16
VPS36-203ENST00000475375 RINT1Q6NUQ1 792 aa22.28■■□□□ 1.16
VPS36-203ENST00000475375 TXNDC11Q6PKC3 985 aa22.28■■□□□ 1.16
VPS36-203ENST00000475375 RALGPS2Q86X27 583 aaPredicted RBP22.28■■□□□ 1.16
VPS36-203ENST00000475375 TMC8Q8IU68 726 aa22.28■■□□□ 1.16
VPS36-203ENST00000475375 CCDC83Q8IWF9 413 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms