RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 SP3Q02447 781 aa19.24■□□□□ 0.67
VARS2-206ENST00000473916 SYCE1Q8N0S2 351 aa19.24■□□□□ 0.67
VARS2-206ENST00000473916 KIF12Q96FN5 646 aa19.24■□□□□ 0.67
VARS2-206ENST00000473916 APOL6Q9BWW8 343 aa19.24■□□□□ 0.67
VARS2-206ENST00000473916 TRIM7Q9C029 511 aa19.24■□□□□ 0.67
VARS2-206ENST00000473916 HMGXB4Q9UGU5 601 aa19.24■□□□□ 0.67
VARS2-206ENST00000473916 PIN4Q9Y237 131 aaKnown RBP19.24■□□□□ 0.67
VARS2-206ENST00000473916 TRPA1O75762 1119 aa19.23■□□□□ 0.67
VARS2-206ENST00000473916 NOMO3P69849 1222 aa19.23■□□□□ 0.67
VARS2-206ENST00000473916 DCAF4L1Q3SXM0 396 aa19.23■□□□□ 0.67
VARS2-206ENST00000473916 GLRA4Q5JXX5 417 aa19.23■□□□□ 0.67
VARS2-206ENST00000473916 DCAF12L1Q5VU92 463 aa19.23■□□□□ 0.67
VARS2-206ENST00000473916 GDF6Q6KF10 455 aaPredicted RBP19.23■□□□□ 0.67
VARS2-206ENST00000473916 NOTUMQ6P988 496 aa19.23■□□□□ 0.67
VARS2-206ENST00000473916 ZNF677Q86XU0 584 aa19.23■□□□□ 0.67
VARS2-206ENST00000473916 MCOLN2Q8IZK6 566 aa19.23■□□□□ 0.67
VARS2-206ENST00000473916 ZNF564Q8TBZ8 553 aaPredicted RBP19.23■□□□□ 0.67
VARS2-206ENST00000473916 ZNF606Q8WXB4 792 aa19.23■□□□□ 0.67
VARS2-206ENST00000473916 TFAP2BQ92481 460 aa19.23■□□□□ 0.67
VARS2-206ENST00000473916 TAF4BQ92750 862 aa19.23■□□□□ 0.67
VARS2-206ENST00000473916 MTG1Q9BT17 334 aaPredicted RBP19.23■□□□□ 0.67
VARS2-206ENST00000473916 UPF3AQ9H1J1 476 aaKnown RBP19.23■□□□□ 0.67
VARS2-206ENST00000473916 PDCL3Q9H2J4 239 aa19.23■□□□□ 0.67
VARS2-206ENST00000473916 CNOT8Q9UFF9 292 aaKnown RBP19.23■□□□□ 0.67
VARS2-206ENST00000473916 GTF3C4Q9UKN8 822 aa19.23■□□□□ 0.67
VARS2-206ENST00000473916 AMFRQ9UKV5 643 aa19.23■□□□□ 0.67
VARS2-206ENST00000473916 DDX3YO15523 660 aaKnown RBP19.22■□□□□ 0.67
VARS2-206ENST00000473916 ADAMTS4O75173 837 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 ZMYND10O75800 440 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 RARBP10826 455 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 AKAP5P24588 427 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 HADHBP55084 474 aaKnown RBP19.22■□□□□ 0.67
VARS2-206ENST00000473916 CENPCQ03188 943 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 MESDQ14696 234 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 CFAP221Q4G0U5 840 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 HDAC7Q8WUI4 952 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 AGAP1Q9UPQ3 857 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 ALG6Q9Y672 507 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 THSD7BQ9C0I4 1608 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 PPEF2O14830 753 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 CEP104O60308 925 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 RRM1P23921 792 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 PAFAH1B1P43034 410 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 MARCKSL1P49006 195 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 TCEAL1Q15170 157 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 ZNF667Q5HYK9 610 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 MON1BQ7L1V2 547 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 CD99L2Q8TCZ2 262 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 RPGRIP1Q96KN7 1286 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 TWNKQ96RR1 684 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 C11orf70Q9BRQ4 267 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 CCDC94Q9BW85 323 aaPredicted RBP19.22■□□□□ 0.67
VARS2-206ENST00000473916 XPNPEP3Q9NQH7 507 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 DPP3Q9NY33 737 aa19.22■□□□□ 0.67
VARS2-206ENST00000473916 CDC42EP1Q00587 391 aa19.21■□□□□ 0.67
VARS2-206ENST00000473916 KCTD19Q17RG1 926 aaPredicted RBP19.21■□□□□ 0.67
VARS2-206ENST00000473916 FAM47CQ5HY64 1035 aa19.21■□□□□ 0.67
VARS2-206ENST00000473916 ALG3Q92685 438 aa19.21■□□□□ 0.67
VARS2-206ENST00000473916 KRT35Q92764 455 aa19.21■□□□□ 0.67
VARS2-206ENST00000473916 C18orf25Q96B23 403 aaPredicted RBP19.21■□□□□ 0.67
VARS2-206ENST00000473916 SNX27Q96L92 541 aa19.21■□□□□ 0.67
VARS2-206ENST00000473916 BCO2Q9BYV7 579 aa19.21■□□□□ 0.67
VARS2-206ENST00000473916 RNF39Q9H2S5 420 aa19.21■□□□□ 0.67
VARS2-206ENST00000473916 TUBGCP4Q9UGJ1 667 aa19.21■□□□□ 0.67
VARS2-206ENST00000473916 GTF2IRD1Q9UHL9 959 aa19.21■□□□□ 0.67
VARS2-206ENST00000473916 RECQL4O94761 1208 aa19.2■□□□□ 0.66
VARS2-206ENST00000473916 MTA2O94776 668 aa19.2■□□□□ 0.66
VARS2-206ENST00000473916 COMTP21964 271 aa19.2■□□□□ 0.66
VARS2-206ENST00000473916 NSFP46459 744 aaKnown RBP19.2■□□□□ 0.66
VARS2-206ENST00000473916 KYAT1Q16773 422 aa19.2■□□□□ 0.66
VARS2-206ENST00000473916 UBXN11Q5T124 520 aa19.2■□□□□ 0.66
VARS2-206ENST00000473916 C11orf63Q6NUN7 778 aa19.2■□□□□ 0.66
VARS2-206ENST00000473916 HPDLQ96IR7 371 aa19.2■□□□□ 0.66
VARS2-206ENST00000473916 LRRC1Q9BTT6 524 aa19.2■□□□□ 0.66
VARS2-206ENST00000473916 KLK14Q9P0G3 267 aa19.2■□□□□ 0.66
VARS2-206ENST00000473916 RAB21Q9UL25 225 aa19.2■□□□□ 0.66
VARS2-206ENST00000473916 C2CD2Q9Y426 696 aa19.2■□□□□ 0.66
VARS2-206ENST00000473916 GJB6O95452 261 aa19.2■□□□□ 0.66
VARS2-206ENST00000473916 ASGR1P07306 291 aa19.2■□□□□ 0.66
VARS2-206ENST00000473916 CTSHP09668 335 aa19.2■□□□□ 0.66
VARS2-206ENST00000473916 CRYBB1P53674 252 aaPredicted RBP19.2■□□□□ 0.66
VARS2-206ENST00000473916 POU5F1Q01860 360 aaKnown RBP19.2■□□□□ 0.66
VARS2-206ENST00000473916 AADACL2Q6P093 401 aa19.2■□□□□ 0.66
VARS2-206ENST00000473916 CC2D1AQ6P1N0 951 aaPredicted RBP19.2■□□□□ 0.66
VARS2-206ENST00000473916 MMS22LQ6ZRQ5 1243 aa19.2■□□□□ 0.66
VARS2-206ENST00000473916 MMGT1Q8N4V1 131 aa19.2■□□□□ 0.66
VARS2-206ENST00000473916 WHAMMQ8TF30 809 aa19.2■□□□□ 0.66
VARS2-206ENST00000473916 OSBPL7Q9BZF2 842 aa19.2■□□□□ 0.66
VARS2-206ENST00000473916 TRIM6Q9C030 488 aaPredicted RBP19.2■□□□□ 0.66
VARS2-206ENST00000473916 PLEKHA4Q9H4M7 779 aa19.2■□□□□ 0.66
VARS2-206ENST00000473916 NOC2LQ9Y3T9 749 aaKnown RBP19.2■□□□□ 0.66
VARS2-206ENST00000473916 GNAT1P11488 350 aa19.19■□□□□ 0.66
VARS2-206ENST00000473916 HTRA3P83110 453 aa19.19■□□□□ 0.66
VARS2-206ENST00000473916 SLC7A5Q01650 507 aa19.19■□□□□ 0.66
VARS2-206ENST00000473916 ZNF211Q13398 564 aaPredicted RBP19.19■□□□□ 0.66
VARS2-206ENST00000473916 KCNA10Q16322 511 aa19.19■□□□□ 0.66
VARS2-206ENST00000473916 FAM228AQ86W67 206 aa19.19■□□□□ 0.66
VARS2-206ENST00000473916 C1orf131Q8NDD1 294 aaKnown RBP19.19■□□□□ 0.66
VARS2-206ENST00000473916 CELF4Q9BZC1 486 aaKnown RBP19.19■□□□□ 0.66
VARS2-206ENST00000473916 ITIH3Q06033 890 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms