RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 SSTR3P32745 418 aaPredicted RBP20.47■□□□□ 0.87
PTCD3-210ENST00000473829 ROR1Q01973 937 aa20.47■□□□□ 0.87
PTCD3-210ENST00000473829 SLC8B1Q6J4K2 584 aa20.47■□□□□ 0.87
PTCD3-210ENST00000473829 DSTYKQ6XUX3 929 aa20.47■□□□□ 0.87
PTCD3-210ENST00000473829 XXYLT1Q8NBI6 393 aa20.47■□□□□ 0.87
PTCD3-210ENST00000473829 OR5B17Q8NGF7 314 aa20.47■□□□□ 0.87
PTCD3-210ENST00000473829 HDAC7Q8WUI4 952 aa20.47■□□□□ 0.87
PTCD3-210ENST00000473829 ZNF707Q96C28 371 aaPredicted RBP20.47■□□□□ 0.87
PTCD3-210ENST00000473829 SENP8Q96LD8 212 aa20.47■□□□□ 0.87
PTCD3-210ENST00000473829 MTMR12Q9C0I1 747 aa20.47■□□□□ 0.87
PTCD3-210ENST00000473829 GZF1Q9H116 711 aaPredicted RBP20.47■□□□□ 0.87
PTCD3-210ENST00000473829 PLEKHA4Q9H4M7 779 aa20.47■□□□□ 0.87
PTCD3-210ENST00000473829 KIAA1586Q9HCI6 787 aa20.47■□□□□ 0.87
PTCD3-210ENST00000473829 FBXL5Q9UKA1 691 aa20.47■□□□□ 0.87
PTCD3-210ENST00000473829 CCDC195A0A1B0GUA6 201 aa20.46■□□□□ 0.87
PTCD3-210ENST00000473829 WDR27A2RRH5 827 aa20.46■□□□□ 0.87
PTCD3-210ENST00000473829 LOC730098B7Z3J9 87 aa20.46■□□□□ 0.87
PTCD3-210ENST00000473829 PAPLNO95428 1278 aa20.46■□□□□ 0.87
PTCD3-210ENST00000473829 ITGB3P05106 788 aa20.46■□□□□ 0.87
PTCD3-210ENST00000473829 SP100P23497 879 aaPredicted RBP20.46■□□□□ 0.87
PTCD3-210ENST00000473829 POLR2BP30876 1174 aaKnown RBP20.46■□□□□ 0.87
PTCD3-210ENST00000473829 MTHFRP42898 656 aa20.46■□□□□ 0.87
PTCD3-210ENST00000473829 CYP24A1Q07973 514 aa20.46■□□□□ 0.87
PTCD3-210ENST00000473829 CTXN3Q4LDR2 81 aa20.46■□□□□ 0.87
PTCD3-210ENST00000473829 APPL2Q8NEU8 664 aa20.46■□□□□ 0.87
PTCD3-210ENST00000473829 CCDC47Q96A33 483 aaKnown RBP20.46■□□□□ 0.87
PTCD3-210ENST00000473829 BORCS6Q96GS4 357 aa20.46■□□□□ 0.87
PTCD3-210ENST00000473829 RPGRIP1Q96KN7 1286 aa20.46■□□□□ 0.87
PTCD3-210ENST00000473829 RIPOR3Q96MK2 946 aa20.46■□□□□ 0.87
PTCD3-210ENST00000473829 CGNQ9P2M7 1197 aaKnown RBP20.46■□□□□ 0.87
PTCD3-210ENST00000473829 SIX4Q9UIU6 781 aa20.46■□□□□ 0.87
PTCD3-210ENST00000473829 MAPK8IP1Q9UQF2 711 aa20.46■□□□□ 0.87
PTCD3-210ENST00000473829 H7C4K7 107 aa20.45■□□□□ 0.86
PTCD3-210ENST00000473829 ZMYND10O75800 440 aa20.45■□□□□ 0.86
PTCD3-210ENST00000473829 TAF6P49848 677 aa20.45■□□□□ 0.86
PTCD3-210ENST00000473829 YWHAHQ04917 246 aaPredicted RBP20.45■□□□□ 0.86
PTCD3-210ENST00000473829 ZNF280DQ6N043 979 aa20.45■□□□□ 0.86
PTCD3-210ENST00000473829 C15orf39Q6ZRI6 1047 aa20.45■□□□□ 0.86
PTCD3-210ENST00000473829 SMYD4Q8IYR2 804 aaPredicted RBP20.45■□□□□ 0.86
PTCD3-210ENST00000473829 PLEKHO2Q8TD55 490 aa20.45■□□□□ 0.86
PTCD3-210ENST00000473829 TIGD1Q96MW7 591 aa20.45■□□□□ 0.86
PTCD3-210ENST00000473829 NECTIN4Q96NY8 510 aa20.45■□□□□ 0.86
PTCD3-210ENST00000473829 POP1Q99575 1024 aaKnown RBP20.45■□□□□ 0.86
PTCD3-210ENST00000473829 INTS13Q9NVM9 706 aa20.45■□□□□ 0.86
PTCD3-210ENST00000473829 DMAC2Q9NW81 257 aa20.45■□□□□ 0.86
PTCD3-210ENST00000473829 ZDHHC7Q9NXF8 308 aa20.45■□□□□ 0.86
PTCD3-210ENST00000473829 DPP7Q9UHL4 492 aa20.45■□□□□ 0.86
PTCD3-210ENST00000473829 DOCK6Q96HP0 2047 aa20.44■□□□□ 0.86
PTCD3-210ENST00000473829 EXOC3O60645 756 aa20.44■□□□□ 0.86
PTCD3-210ENST00000473829 OAZ2O95190 189 aa20.44■□□□□ 0.86
PTCD3-210ENST00000473829 C8AP07357 584 aa20.44■□□□□ 0.86
PTCD3-210ENST00000473829 TMEM191BP0C7N4 346 aa20.44■□□□□ 0.86
PTCD3-210ENST00000473829 TYMPP19971 482 aa20.44■□□□□ 0.86
PTCD3-210ENST00000473829 ARPP19P56211 112 aa20.44■□□□□ 0.86
PTCD3-210ENST00000473829 PSMD6Q15008 389 aa20.44■□□□□ 0.86
PTCD3-210ENST00000473829 ATAT1Q5SQI0 421 aa20.44■□□□□ 0.86
PTCD3-210ENST00000473829 ELMSAN1Q6PJG2 1045 aa20.44■□□□□ 0.86
PTCD3-210ENST00000473829 GOLGA5Q8TBA6 731 aa20.44■□□□□ 0.86
PTCD3-210ENST00000473829 SLC7A14Q8TBB6 771 aa20.44■□□□□ 0.86
PTCD3-210ENST00000473829 CACTINQ8WUQ7 758 aaKnown RBP20.44■□□□□ 0.86
PTCD3-210ENST00000473829 ITGA11Q9UKX5 1188 aa20.44■□□□□ 0.86
PTCD3-210ENST00000473829 AGAP1Q9UPQ3 857 aa20.44■□□□□ 0.86
PTCD3-210ENST00000473829 PDXKO00764 312 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 ABLIM3O94929 683 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 NR3C1P04150 777 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 OR4Q2P0C623 313 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 DLATP10515 647 aaKnown RBP20.43■□□□□ 0.86
PTCD3-210ENST00000473829 ODC1P11926 461 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 CASP4P49662 377 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 LIN9Q5TKA1 542 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 OVOS1Q6IE37 1185 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 WDR49Q8IV35 697 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 SLC9A9Q8IVB4 645 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 GUF1Q8N442 669 aaKnown RBP20.43■□□□□ 0.86
PTCD3-210ENST00000473829 CSGALNACT2Q8N6G5 542 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 SPATA20Q8TB22 786 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 TMEM174Q8WUU8 243 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 SMG7Q92540 1137 aaKnown RBP20.43■□□□□ 0.86
PTCD3-210ENST00000473829 CCDC127Q96BQ5 260 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 CCDC34Q96HJ3 373 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 MFSD14AQ96MC6 490 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 ZNF560Q96MR9 790 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 CGRRF1Q99675 332 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 TSHZ2Q9NRE2 1034 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 TRAF3IP3Q9Y228 551 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 PCDHA5Q9Y5H7 936 aa20.43■□□□□ 0.86
PTCD3-210ENST00000473829 KPNA7A9QM74 516 aa20.42■□□□□ 0.86
PTCD3-210ENST00000473829 CYB561D2O14569 222 aa20.42■□□□□ 0.86
PTCD3-210ENST00000473829 CYP11A1P05108 521 aa20.42■□□□□ 0.86
PTCD3-210ENST00000473829 KRT19P08727 400 aa20.42■□□□□ 0.86
PTCD3-210ENST00000473829 PAX3P23760 479 aa20.42■□□□□ 0.86
PTCD3-210ENST00000473829 SURF1Q15526 300 aa20.42■□□□□ 0.86
PTCD3-210ENST00000473829 SV2CQ496J9 727 aa20.42■□□□□ 0.86
PTCD3-210ENST00000473829 USP37Q86T82 979 aa20.42■□□□□ 0.86
PTCD3-210ENST00000473829 ZNF461Q8TAF7 563 aa20.42■□□□□ 0.86
PTCD3-210ENST00000473829 ANKRD36BP1Q96IX9 119 aa20.42■□□□□ 0.86
PTCD3-210ENST00000473829 TMEM209Q96SK2 561 aa20.42■□□□□ 0.86
PTCD3-210ENST00000473829 RTP3Q9BQQ7 232 aa20.42■□□□□ 0.86
PTCD3-210ENST00000473829 RHOBTB2Q9BYZ6 727 aa20.42■□□□□ 0.86
PTCD3-210ENST00000473829 PRKD2Q9BZL6 878 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms