RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 C8orf74Q6P047 294 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 EEPD1Q7L9B9 569 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 CABP7Q86V35 215 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 ST13P4Q8IZP2 240 aaPredicted RBP5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 NUP93Q8N1F7 819 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 SPATA4Q8NEY3 305 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 CDK5RAP3Q96JB5 506 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 NUDCD1Q96RS6 583 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 RNF208Q9H0X6 261 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 GSX1Q9H4S2 264 aaPredicted RBP5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 RRAGCQ9HB90 399 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 POLD4Q9HCU8 107 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 ZMYND8Q9ULU4 1186 aaPredicted RBP5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 GIT1Q9Y2X7 761 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 HEY1Q9Y5J3 304 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 USH1CQ9Y6N9 552 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 COL3A1P02461 1466 aaPredicted RBP5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 C1orf167Q5SNV9 1468 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 BOLA2-SMG1P6H3BVE0 249 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 CTNND1O60716 968 aaKnown RBP5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 SRGAP2O75044 1071 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 PTPN2P17706 415 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 RPS6KB1P23443 525 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 CEBPAP49715 358 aaPredicted RBP5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 KRT83P78385 493 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 KIF23Q02241 960 aaPredicted RBP5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 STK38Q15208 465 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 TSHZ3Q63HK5 1081 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 Q6ZNX1 250 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 TMCO5AQ8N6Q1 288 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 LINC00301Q8NCQ3 95 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 VPS37AQ8NEZ2 397 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 FERMT2Q96AC1 680 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 MPP4Q96JB8 637 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 CENPOQ9BU64 300 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 NDEL1Q9GZM8 345 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 ATXN3LQ9H3M9 355 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 PARVGQ9HBI0 331 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 TRPC7Q9HCX4 862 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 TXLNGQ9NUQ3 528 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 NMRK1Q9NWW6 199 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 DDX43Q9NXZ2 648 aaKnown RBP5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 PFDN2Q9UHV9 154 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 NFE2L3Q9Y4A8 694 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 NUMBLQ9Y6R0 609 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 SLIT3O75094 1523 aa5.47□□□□□ -1.53
TMEM39A-206ENST00000473684 ANKRD26Q9UPS8 1709 aa5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 FAM86C2PA6NEL3 165 aa5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 MARCH6O60337 910 aa5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 SUN1O94901 812 aa5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 SPATA31D3P0C874 917 aa5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 TCP1P17987 556 aaKnown RBP5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 LRP8Q14114 963 aa5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 NKG7Q16617 165 aa5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 MEX3CQ5U5Q3 659 aaKnown RBP5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 KAZNQ674X7 775 aa5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 SPATA31D4Q6ZUB0 917 aa5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 ACAD11Q709F0 780 aa5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 CREG2Q8IUH2 290 aa5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 ZBED8Q8IZ13 594 aa5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 SPERTQ8NA61 448 aa5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 PPFIBP2Q8ND30 876 aa5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 GPATCH3Q96I76 525 aa5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 TMEM237Q96Q45 408 aa5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 CYP4F12Q9HCS2 524 aa5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 ABCF3Q9NUQ8 709 aa5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 RNF14Q9UBS8 474 aa5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 SNX12Q9UMY4 172 aa5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 HBS1LQ9Y450 684 aaKnown RBP5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 EPN1Q9Y6I3 576 aaPredicted RBP5.46□□□□□ -1.53
TMEM39A-206ENST00000473684 KAT6BQ8WYB5 2073 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 LRRC37A3O60309 1634 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 E9PBE3 544 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 RGS13O14921 159 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 NDUFA10O95299 355 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 TIAF1O95411 115 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 OXSR1O95747 527 aaPredicted RBP5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 OAS1P00973 400 aaKnown RBP5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 CYP1A1P04798 512 aaPredicted RBP5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 LYNP07948 512 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 TKTP29401 623 aaKnown RBP5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 CAP2P40123 477 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 PAFAH1B1P43034 410 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 RELAQ04206 551 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 SOX4Q06945 474 aaPredicted RBP5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 TOB2Q14106 344 aaPredicted RBP5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 TTLL4Q14679 1199 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 SPCS2Q15005 226 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 ARL13BQ3SXY8 428 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 CCDC122Q5T0U0 273 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 KIAA1211LQ6NV74 962 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 IGF2-ASQ6U949 168 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 UBE3DQ7Z6J8 389 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 PATL1Q86TB9 770 aaKnown RBP5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 ZC3H18Q86VM9 953 aaKnown RBP5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 PALB2Q86YC2 1186 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 LSMEM2Q8N112 164 aa5.46□□□□□ -1.54
TMEM39A-206ENST00000473684 BBS5Q8N3I7 341 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms