RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 TPP1O14773 563 aa7.15□□□□□ -1.26
CLK1-209ENST00000472679 CRB2Q5IJ48 1285 aa7.15□□□□□ -1.26
CLK1-209ENST00000472679 MIIPQ5JXC2 388 aa7.15□□□□□ -1.26
CLK1-209ENST00000472679 FNDC7Q5VTL7 733 aa7.15□□□□□ -1.26
CLK1-209ENST00000472679 B3GNTL1Q67FW5 361 aaPredicted RBP7.15□□□□□ -1.26
CLK1-209ENST00000472679 MAPKAPK5Q8IW41 473 aa7.15□□□□□ -1.26
CLK1-209ENST00000472679 PDPRQ8NCN5 879 aa7.15□□□□□ -1.26
CLK1-209ENST00000472679 NSUN7Q8NE18 718 aaKnown RBP7.15□□□□□ -1.26
CLK1-209ENST00000472679 SLC25A43Q8WUT9 341 aaPredicted RBP7.15□□□□□ -1.26
CLK1-209ENST00000472679 MRGPRX1Q96LB2 322 aa7.15□□□□□ -1.26
CLK1-209ENST00000472679 ZNF747Q9BV97 191 aa7.15□□□□□ -1.26
CLK1-209ENST00000472679 RNPEPQ9H4A4 650 aa7.15□□□□□ -1.26
CLK1-209ENST00000472679 FAM204AQ9H8W3 233 aa7.15□□□□□ -1.26
CLK1-209ENST00000472679 RSAD1Q9HA92 442 aa7.15□□□□□ -1.26
CLK1-209ENST00000472679 SARS2Q9NP81 518 aaKnown RBP7.15□□□□□ -1.26
CLK1-209ENST00000472679 RLIMQ9NVW2 624 aa7.15□□□□□ -1.26
CLK1-209ENST00000472679 GPRC5BQ9NZH0 403 aa7.15□□□□□ -1.26
CLK1-209ENST00000472679 ZDHHC8Q9ULC8 765 aa7.15□□□□□ -1.26
CLK1-209ENST00000472679 CDYLQ9Y232 598 aa7.15□□□□□ -1.26
CLK1-209ENST00000472679 FPGT-TNNI3KV9GXZ4 949 aa7.15□□□□□ -1.26
CLK1-209ENST00000472679 MARCH11A6NNE9 402 aa7.14□□□□□ -1.27
CLK1-209ENST00000472679 RNASET2O00584 256 aaKnown RBP7.14□□□□□ -1.27
CLK1-209ENST00000472679 MATN3O15232 486 aa7.14□□□□□ -1.27
CLK1-209ENST00000472679 NDUFA10O95299 355 aa7.14□□□□□ -1.27
CLK1-209ENST00000472679 CFIP05156 583 aa7.14□□□□□ -1.27
CLK1-209ENST00000472679 SPATA31D3P0C874 917 aa7.14□□□□□ -1.27
CLK1-209ENST00000472679 RARBP10826 455 aa7.14□□□□□ -1.27
CLK1-209ENST00000472679 ZNF135P52742 658 aaPredicted RBP7.14□□□□□ -1.27
CLK1-209ENST00000472679 SOX8P57073 446 aa7.14□□□□□ -1.27
CLK1-209ENST00000472679 CNN3Q15417 329 aaKnown RBP7.14□□□□□ -1.27
CLK1-209ENST00000472679 BEAN1Q3B7T3 259 aa7.14□□□□□ -1.27
CLK1-209ENST00000472679 IGFL4Q6B9Z1 124 aa7.14□□□□□ -1.27
CLK1-209ENST00000472679 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.14□□□□□ -1.27
CLK1-209ENST00000472679 SPATA31D4Q6ZUB0 917 aa7.14□□□□□ -1.27
CLK1-209ENST00000472679 MAEAQ7L5Y9 396 aa7.14□□□□□ -1.27
CLK1-209ENST00000472679 PDSS2Q86YH6 399 aa7.14□□□□□ -1.27
CLK1-209ENST00000472679 SCAMP4Q969E2 229 aa7.14□□□□□ -1.27
CLK1-209ENST00000472679 LRIG1Q96JA1 1093 aa7.14□□□□□ -1.27
CLK1-209ENST00000472679 PNKPQ96T60 521 aa7.14□□□□□ -1.27
CLK1-209ENST00000472679 BHMT2Q9H2M3 363 aa7.14□□□□□ -1.27
CLK1-209ENST00000472679 GPR35Q9HC97 309 aa7.14□□□□□ -1.27
CLK1-209ENST00000472679 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.14□□□□□ -1.27
CLK1-209ENST00000472679 KIF3BO15066 747 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 ZFPL1O95159 310 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 GPANK1O95872 356 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 ZBED1O96006 694 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 ANXA1P04083 346 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 KITP10721 976 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 NPR1P16066 1061 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 GNALP38405 381 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 GPSM2P81274 684 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 TUBA3CQ13748 450 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 PUM1Q14671 1186 aaKnown RBP eCLIP7.13□□□□□ -1.27
CLK1-209ENST00000472679 LSM12Q3MHD2 195 aaKnown RBP7.13□□□□□ -1.27
CLK1-209ENST00000472679 LCE1DQ5T752 114 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 EMC10Q5UCC4 262 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 TUBA3EQ6PEY2 450 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 CCDC149Q6ZUS6 474 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 CFAP52Q8N1V2 620 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 TMEM132CQ8N3T6 1108 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 AOPEPQ8N6M6 819 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 Q8NA96 180 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 PCSK9Q8NBP7 692 aaKnown RBP7.13□□□□□ -1.27
CLK1-209ENST00000472679 P2RX7Q99572 595 aaKnown RBP7.13□□□□□ -1.27
CLK1-209ENST00000472679 ADAM2Q99965 735 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 C22orf23Q9BZE7 217 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 MYRFQ9Y2G1 1151 aa7.13□□□□□ -1.27
CLK1-209ENST00000472679 GAGE12BA1L429 117 aa7.12□□□□□ -1.27
CLK1-209ENST00000472679 CFAP69A5D8W1 941 aa7.12□□□□□ -1.27
CLK1-209ENST00000472679 GAGE12HA6NDE8 117 aa7.12□□□□□ -1.27
CLK1-209ENST00000472679 LPXNO60711 386 aa7.12□□□□□ -1.27
CLK1-209ENST00000472679 HRGP04196 525 aa7.12□□□□□ -1.27
CLK1-209ENST00000472679 RHCEP18577 417 aa7.12□□□□□ -1.27
CLK1-209ENST00000472679 RHDQ02161 417 aa7.12□□□□□ -1.27
CLK1-209ENST00000472679 RESTQ13127 1097 aa7.12□□□□□ -1.27
CLK1-209ENST00000472679 KIAA0753Q2KHM9 967 aa7.12□□□□□ -1.27
CLK1-209ENST00000472679 APOA5Q6Q788 366 aa7.12□□□□□ -1.27
CLK1-209ENST00000472679 SRGAP1Q7Z6B7 1085 aa7.12□□□□□ -1.27
CLK1-209ENST00000472679 GGNQ86UU5 652 aa7.12□□□□□ -1.27
CLK1-209ENST00000472679 CPEB3Q8NE35 698 aaKnown RBP7.12□□□□□ -1.27
CLK1-209ENST00000472679 IL31RAQ8NI17 732 aa7.12□□□□□ -1.27
CLK1-209ENST00000472679 ZNF483Q8TF39 744 aaPredicted RBP7.12□□□□□ -1.27
CLK1-209ENST00000472679 NACC2Q96BF6 587 aa7.12□□□□□ -1.27
CLK1-209ENST00000472679 TINAGL1Q9GZM7 467 aaPredicted RBP7.12□□□□□ -1.27
CLK1-209ENST00000472679 VPS11Q9H270 941 aa7.12□□□□□ -1.27
CLK1-209ENST00000472679 NRDE2Q9H7Z3 1164 aa7.12□□□□□ -1.27
CLK1-209ENST00000472679 DKK2Q9UBU2 259 aa7.12□□□□□ -1.27
CLK1-209ENST00000472679 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.12□□□□□ -1.27
CLK1-209ENST00000472679 USP19O94966 1318 aa7.11□□□□□ -1.27
CLK1-209ENST00000472679 A0A1W2PPL8 197 aa7.11□□□□□ -1.27
CLK1-209ENST00000472679 DNAJB5O75953 348 aa7.11□□□□□ -1.27
CLK1-209ENST00000472679 KIF20AO95235 890 aa7.11□□□□□ -1.27
CLK1-209ENST00000472679 PEX11BO96011 259 aa7.11□□□□□ -1.27
CLK1-209ENST00000472679 TNFRSF1AP19438 455 aa7.11□□□□□ -1.27
CLK1-209ENST00000472679 CXADRP78310 365 aa7.11□□□□□ -1.27
CLK1-209ENST00000472679 HABP2Q14520 560 aaPredicted RBP7.11□□□□□ -1.27
CLK1-209ENST00000472679 ZXDCQ2QGD7 858 aaPredicted RBP7.11□□□□□ -1.27
CLK1-209ENST00000472679 RNF220Q5VTB9 566 aa7.11□□□□□ -1.27
CLK1-209ENST00000472679 USP37Q86T82 979 aa7.11□□□□□ -1.27
CLK1-209ENST00000472679 MYEOVQ96EZ4 313 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms