RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.52■■□□□ 1.04
UBQLN4-203ENST00000472638 A0A1B0GVL5 298 aa21.51■■□□□ 1.03
UBQLN4-203ENST00000472638 M0QZQ0 153 aa21.51■■□□□ 1.03
UBQLN4-203ENST00000472638 PRRG1O14668 218 aa21.51■■□□□ 1.03
UBQLN4-203ENST00000472638 XYLBO75191 536 aa21.51■■□□□ 1.03
UBQLN4-203ENST00000472638 FSHRP23945 695 aa21.51■■□□□ 1.03
UBQLN4-203ENST00000472638 ELF1P32519 619 aa21.51■■□□□ 1.03
UBQLN4-203ENST00000472638 AFMP43652 599 aa21.51■■□□□ 1.03
UBQLN4-203ENST00000472638 NDUFA8P51970 172 aa21.51■■□□□ 1.03
UBQLN4-203ENST00000472638 WNT7BP56706 349 aa21.51■■□□□ 1.03
UBQLN4-203ENST00000472638 SKOR2Q2VWA4 1001 aaPredicted RBP21.51■■□□□ 1.03
UBQLN4-203ENST00000472638 C9orf57Q5W0N0 161 aa21.51■■□□□ 1.03
UBQLN4-203ENST00000472638 GRAMD1CQ8IYS0 662 aa21.51■■□□□ 1.03
UBQLN4-203ENST00000472638 ENGASEQ8NFI3 743 aa21.51■■□□□ 1.03
UBQLN4-203ENST00000472638 ST13P5Q8NFI4 369 aaPredicted RBP21.51■■□□□ 1.03
UBQLN4-203ENST00000472638 ZNF461Q8TAF7 563 aa21.51■■□□□ 1.03
UBQLN4-203ENST00000472638 C7orf25Q9BPX7 421 aa21.51■■□□□ 1.03
UBQLN4-203ENST00000472638 HCFC1R1Q9NWW0 138 aa21.51■■□□□ 1.03
UBQLN4-203ENST00000472638 KCNH3Q9ULD8 1083 aa21.51■■□□□ 1.03
UBQLN4-203ENST00000472638 SPTLC1O15269 473 aa21.5■■□□□ 1.03
UBQLN4-203ENST00000472638 HOXA9P31269 272 aa21.5■■□□□ 1.03
UBQLN4-203ENST00000472638 SYKP43405 635 aa21.5■■□□□ 1.03
UBQLN4-203ENST00000472638 AARSP49588 968 aaKnown RBP eCLIP21.5■■□□□ 1.03
UBQLN4-203ENST00000472638 YWHAHQ04917 246 aaPredicted RBP21.5■■□□□ 1.03
UBQLN4-203ENST00000472638 KLHL40Q2TBA0 621 aa21.5■■□□□ 1.03
UBQLN4-203ENST00000472638 UVSSAQ2YD98 709 aa21.5■■□□□ 1.03
UBQLN4-203ENST00000472638 STXBP4Q6ZWJ1 553 aa21.5■■□□□ 1.03
UBQLN4-203ENST00000472638 EFCAB13Q8IY85 973 aa21.5■■□□□ 1.03
UBQLN4-203ENST00000472638 FMR1NBQ8N0W7 255 aaPredicted RBP21.5■■□□□ 1.03
UBQLN4-203ENST00000472638 RSAD2Q8WXG1 361 aa21.5■■□□□ 1.03
UBQLN4-203ENST00000472638 ASIC4Q96FT7 647 aa21.5■■□□□ 1.03
UBQLN4-203ENST00000472638 TMEM206Q9H813 350 aa21.5■■□□□ 1.03
UBQLN4-203ENST00000472638 KCNK12Q9HB15 430 aa21.5■■□□□ 1.03
UBQLN4-203ENST00000472638 CYP4F11Q9HBI6 524 aa21.5■■□□□ 1.03
UBQLN4-203ENST00000472638 DPP3Q9NY33 737 aa21.5■■□□□ 1.03
UBQLN4-203ENST00000472638 MTCL1Q9Y4B5 1905 aaKnown RBP21.5■■□□□ 1.03
UBQLN4-203ENST00000472638 TECTAO75443 2155 aa21.5■■□□□ 1.03
UBQLN4-203ENST00000472638 TRIOO75962 3097 aa21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 ABLIM3O94929 683 aa21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 IL18RAPO95256 599 aa21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 SEC24AO95486 1093 aa21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 OR4Q2P0C623 313 aa21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 CPB1P15086 417 aa21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 GARTP22102 1010 aa21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 LILRA4P59901 499 aa21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 SNW1Q13573 536 aaKnown RBP21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 ARMCX5Q6P1M9 558 aa21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 USP37Q86T82 979 aa21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 UBALD2Q8IYN6 164 aa21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 FAM84AQ96KN4 292 aa21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 SENP8Q96LD8 212 aa21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 MFSD14AQ96MC6 490 aa21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 MAGEF1Q9HAY2 307 aa21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 RBAKQ9NYW8 714 aaPredicted RBP21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 DNMT3BQ9UBC3 853 aaKnown RBP21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 USP25Q9UHP3 1055 aa21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 SERTAD1Q9UHV2 236 aa21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 C2CD2Q9Y426 696 aa21.49■■□□□ 1.03
UBQLN4-203ENST00000472638 ANO9A1A5B4 782 aa21.48■■□□□ 1.03
UBQLN4-203ENST00000472638 PIRO00625 290 aa21.48■■□□□ 1.03
UBQLN4-203ENST00000472638 PDGFBP01127 241 aaPredicted RBP21.48■■□□□ 1.03
UBQLN4-203ENST00000472638 LRG1P02750 347 aa21.48■■□□□ 1.03
UBQLN4-203ENST00000472638 ATF2P15336 505 aa21.48■■□□□ 1.03
UBQLN4-203ENST00000472638 HOXD13P35453 343 aa21.48■■□□□ 1.03
UBQLN4-203ENST00000472638 TFAMQ00059 246 aaKnown RBP21.48■■□□□ 1.03
UBQLN4-203ENST00000472638 CUL4BQ13620 913 aa21.48■■□□□ 1.03
UBQLN4-203ENST00000472638 FAM26FQ5R3K3 315 aa21.48■■□□□ 1.03
UBQLN4-203ENST00000472638 CNNM4Q6P4Q7 775 aa21.48■■□□□ 1.03
UBQLN4-203ENST00000472638 RNF19BQ6ZMZ0 732 aa21.48■■□□□ 1.03
UBQLN4-203ENST00000472638 BMP8AQ7Z5Y6 402 aa21.48■■□□□ 1.03
UBQLN4-203ENST00000472638 CEP57L1Q8IYX8 460 aa21.48■■□□□ 1.03
UBQLN4-203ENST00000472638 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.48■■□□□ 1.037e-8■■□□□ 11.6
UBQLN4-203ENST00000472638 EPS15L1Q9UBC2 864 aa21.48■■□□□ 1.03
UBQLN4-203ENST00000472638 EXTL3O43909 919 aa21.47■■□□□ 1.03
UBQLN4-203ENST00000472638 OAZ2O95190 189 aa21.47■■□□□ 1.03
UBQLN4-203ENST00000472638 LDHAP00338 332 aaKnown RBP21.47■■□□□ 1.03
UBQLN4-203ENST00000472638 LAMP2P13473 410 aa21.47■■□□□ 1.03
UBQLN4-203ENST00000472638 POU5F1Q01860 360 aaKnown RBP21.47■■□□□ 1.03
UBQLN4-203ENST00000472638 ADCY1Q08828 1119 aa21.47■■□□□ 1.03
UBQLN4-203ENST00000472638 TDGQ13569 410 aa21.47■■□□□ 1.03
UBQLN4-203ENST00000472638 OVOS1Q6IE37 1185 aa21.47■■□□□ 1.03
UBQLN4-203ENST00000472638 UNC13DQ70J99 1090 aa21.47■■□□□ 1.03
UBQLN4-203ENST00000472638 BRSK2Q8IWQ3 736 aa21.47■■□□□ 1.03
UBQLN4-203ENST00000472638 NELFCDQ8IXH7 590 aa21.47■■□□□ 1.03
UBQLN4-203ENST00000472638 ITFG1Q8TB96 612 aa21.47■■□□□ 1.03
UBQLN4-203ENST00000472638 TIGD1Q96MW7 591 aa21.47■■□□□ 1.03
UBQLN4-203ENST00000472638 PGLYRP2Q96PD5 576 aa21.47■■□□□ 1.03
UBQLN4-203ENST00000472638 KINO60870 393 aaKnown RBP21.46■■□□□ 1.03
UBQLN4-203ENST00000472638 ZNF202O95125 648 aa21.46■■□□□ 1.03
UBQLN4-203ENST00000472638 ODC1P11926 461 aa21.46■■□□□ 1.03
UBQLN4-203ENST00000472638 PABPC1LQ4VXU2 614 aaKnown RBP21.46■■□□□ 1.03
UBQLN4-203ENST00000472638 TPGS2Q68CL5 300 aa21.46■■□□□ 1.03
UBQLN4-203ENST00000472638 EPM2AIP1Q7L775 607 aaPredicted RBP21.46■■□□□ 1.03
UBQLN4-203ENST00000472638 SUGP1Q8IWZ8 645 aaKnown RBP21.46■■□□□ 1.03
UBQLN4-203ENST00000472638 TCEAL8Q8IYN2 117 aa21.46■■□□□ 1.03
UBQLN4-203ENST00000472638 GPD1LQ8N335 351 aa21.46■■□□□ 1.03
UBQLN4-203ENST00000472638 FBXL6Q8N531 539 aa21.46■■□□□ 1.03
UBQLN4-203ENST00000472638 ING5Q8WYH8 240 aa21.46■■□□□ 1.03
UBQLN4-203ENST00000472638 PDE11AQ9HCR9 933 aa21.46■■□□□ 1.03
UBQLN4-203ENST00000472638 SLC39A2Q9NP94 309 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms