RNA–Protein interactions for RNA: ENST00000471477.1

COL15A1-203, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 2

Gene COL15A1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-203ENST00000471477 PCDHB8Q9UN66 801 aa27.16■■□□□ 1.94
COL15A1-203ENST00000471477 CLASP2O75122 1294 aaKnown RBP27.16■■□□□ 1.94
COL15A1-203ENST00000471477 TRIM49P0CI25 452 aa27.16■■□□□ 1.94
COL15A1-203ENST00000471477 TRIM49CP0CI26 452 aa27.16■■□□□ 1.94
COL15A1-203ENST00000471477 RPL17P18621 184 aaKnown RBP27.16■■□□□ 1.94
COL15A1-203ENST00000471477 PNPLA4P41247 253 aa27.16■■□□□ 1.94
COL15A1-203ENST00000471477 PSMD5Q16401 504 aa27.16■■□□□ 1.94
COL15A1-203ENST00000471477 SV2CQ496J9 727 aa27.16■■□□□ 1.94
COL15A1-203ENST00000471477 C1orf220Q5T0J3 134 aa27.16■■□□□ 1.94
COL15A1-203ENST00000471477 USP37Q86T82 979 aa27.16■■□□□ 1.94
COL15A1-203ENST00000471477 LRRC52Q8N7C0 313 aa27.16■■□□□ 1.94
COL15A1-203ENST00000471477 BORCS6Q96GS4 357 aa27.16■■□□□ 1.94
COL15A1-203ENST00000471477 SENP8Q96LD8 212 aa27.16■■□□□ 1.94
COL15A1-203ENST00000471477 CEP63Q96MT8 703 aa27.16■■□□□ 1.94
COL15A1-203ENST00000471477 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.16■■□□□ 1.94
COL15A1-203ENST00000471477 R3HCC1Q9Y3T6 440 aaKnown RBP27.16■■□□□ 1.94
COL15A1-203ENST00000471477 TEX28O15482 410 aa27.15■■□□□ 1.94
COL15A1-203ENST00000471477 LINC01565O15544 149 aa27.15■■□□□ 1.94
COL15A1-203ENST00000471477 PAX3P23760 479 aa27.15■■□□□ 1.94
COL15A1-203ENST00000471477 AP3M2P53677 418 aa27.15■■□□□ 1.94
COL15A1-203ENST00000471477 VARS2Q5ST30 1063 aaKnown RBP27.15■■□□□ 1.94
COL15A1-203ENST00000471477 TDRD10Q5VZ19 366 aaKnown RBP27.15■■□□□ 1.94
COL15A1-203ENST00000471477 EFHBQ8N7U6 833 aa27.15■■□□□ 1.94
COL15A1-203ENST00000471477 PRDM6Q9NQX0 595 aa27.15■■□□□ 1.94
COL15A1-203ENST00000471477 CLDND1Q9NY35 253 aa27.15■■□□□ 1.94
COL15A1-203ENST00000471477 TIMM13Q9Y5L4 95 aaPredicted RBP27.15■■□□□ 1.94
COL15A1-203ENST00000471477 XIRP2A4UGR9 3374 aa27.14■■□□□ 1.94
COL15A1-203ENST00000471477 RBM10P98175 930 aaKnown RBP27.14■■□□□ 1.93
COL15A1-203ENST00000471477 CREMQ03060 361 aa27.14■■□□□ 1.93
COL15A1-203ENST00000471477 ENPEPQ07075 957 aa27.14■■□□□ 1.93
COL15A1-203ENST00000471477 BIRC3Q13489 604 aa27.14■■□□□ 1.93
COL15A1-203ENST00000471477 COL19A1Q14993 1142 aa27.14■■□□□ 1.93
COL15A1-203ENST00000471477 KLHL40Q2TBA0 621 aa27.14■■□□□ 1.93
COL15A1-203ENST00000471477 PDXDC1Q6P996 788 aa27.14■■□□□ 1.93
COL15A1-203ENST00000471477 ANKS3Q6ZW76 656 aa27.14■■□□□ 1.93
COL15A1-203ENST00000471477 GLYCTKQ8IVS8 523 aa27.14■■□□□ 1.93
COL15A1-203ENST00000471477 APPL2Q8NEU8 664 aa27.14■■□□□ 1.93
COL15A1-203ENST00000471477 VN1R2Q8NFZ6 395 aa27.14■■□□□ 1.93
COL15A1-203ENST00000471477 PABPC5Q96DU9 382 aaKnown RBP27.14■■□□□ 1.93
COL15A1-203ENST00000471477 MED15Q96RN5 788 aa27.14■■□□□ 1.93
COL15A1-203ENST00000471477 FNIP2Q9P278 1114 aa27.14■■□□□ 1.93
COL15A1-203ENST00000471477 DACH1Q9UI36 760 aa27.14■■□□□ 1.93
COL15A1-203ENST00000471477 KPNA7A9QM74 516 aa27.13■■□□□ 1.93
COL15A1-203ENST00000471477 IKBKBO14920 756 aa27.13■■□□□ 1.93
COL15A1-203ENST00000471477 NCK2O43639 380 aa27.13■■□□□ 1.93
COL15A1-203ENST00000471477 GLP2RO95838 553 aa27.13■■□□□ 1.93
COL15A1-203ENST00000471477 CST3P01034 146 aaPredicted RBP27.13■■□□□ 1.93
COL15A1-203ENST00000471477 C4BPAP04003 597 aaKnown RBP27.13■■□□□ 1.93
COL15A1-203ENST00000471477 ODC1P11926 461 aa27.13■■□□□ 1.93
COL15A1-203ENST00000471477 KLRC2P26717 231 aa27.13■■□□□ 1.93
COL15A1-203ENST00000471477 CTC1Q2NKJ3 1217 aa27.13■■□□□ 1.93
COL15A1-203ENST00000471477 LLGL2Q6P1M3 1020 aa27.13■■□□□ 1.93
COL15A1-203ENST00000471477 EP400NLQ6ZTU2 488 aa27.13■■□□□ 1.93
COL15A1-203ENST00000471477 FILIP1Q7Z7B0 1213 aa27.13■■□□□ 1.93
COL15A1-203ENST00000471477 SYAP1Q96A49 352 aaPredicted RBP27.13■■□□□ 1.93
COL15A1-203ENST00000471477 MTRRQ9UBK8 725 aa27.13■■□□□ 1.93
COL15A1-203ENST00000471477 FSD2A1L4K1 749 aa27.12■■□□□ 1.93
COL15A1-203ENST00000471477 PHACTR2O75167 634 aa27.12■■□□□ 1.93
COL15A1-203ENST00000471477 ADH1AP07327 375 aa27.12■■□□□ 1.93
COL15A1-203ENST00000471477 ADAM15Q13444 863 aa27.12■■□□□ 1.93
COL15A1-203ENST00000471477 SASS6Q6UVJ0 657 aa27.12■■□□□ 1.93
COL15A1-203ENST00000471477 HPDLQ96IR7 371 aa27.12■■□□□ 1.93
COL15A1-203ENST00000471477 CLSTN3Q9BQT9 956 aa27.12■■□□□ 1.93
COL15A1-203ENST00000471477 SRRTQ9BXP5 876 aaKnown RBP27.12■■□□□ 1.93
COL15A1-203ENST00000471477 MMRN2Q9H8L6 949 aa27.12■■□□□ 1.93
COL15A1-203ENST00000471477 HCFC2Q9Y5Z7 792 aa27.12■■□□□ 1.93
COL15A1-203ENST00000471477 MTCL1Q9Y4B5 1905 aaKnown RBP27.12■■□□□ 1.93
COL15A1-203ENST00000471477 CYB561D2O14569 222 aa27.11■■□□□ 1.93
COL15A1-203ENST00000471477 GCLMP48507 274 aa27.11■■□□□ 1.93
COL15A1-203ENST00000471477 NDUFV1P49821 464 aa27.11■■□□□ 1.93
COL15A1-203ENST00000471477 MCCD1P59942 119 aaPredicted RBP27.11■■□□□ 1.93
COL15A1-203ENST00000471477 PPP3CAQ08209 521 aa27.11■■□□□ 1.93
COL15A1-203ENST00000471477 MYO1EQ12965 1108 aa27.11■■□□□ 1.93
COL15A1-203ENST00000471477 TRPC3Q13507 836 aa27.11■■□□□ 1.93
COL15A1-203ENST00000471477 KCNC3Q14003 757 aa27.11■■□□□ 1.93
COL15A1-203ENST00000471477 MRPL58Q14197 206 aaKnown RBP27.11■■□□□ 1.93
COL15A1-203ENST00000471477 ZACNQ401N2 412 aa27.11■■□□□ 1.93
COL15A1-203ENST00000471477 SV2AQ7L0J3 742 aa27.11■■□□□ 1.93
COL15A1-203ENST00000471477 UBE2ZQ9H832 354 aaPredicted RBP27.11■■□□□ 1.93
COL15A1-203ENST00000471477 ARMCX3Q9UH62 379 aaPredicted RBP27.11■■□□□ 1.93
COL15A1-203ENST00000471477 ADAM12O43184 909 aa27.1■■□□□ 1.93
COL15A1-203ENST00000471477 TBX10O75333 385 aa27.1■■□□□ 1.93
COL15A1-203ENST00000471477 TYMPP19971 482 aa27.1■■□□□ 1.93
COL15A1-203ENST00000471477 CLCN4P51793 760 aa27.1■■□□□ 1.93
COL15A1-203ENST00000471477 YWHAHQ04917 246 aaPredicted RBP27.1■■□□□ 1.93
COL15A1-203ENST00000471477 CCDC40Q4G0X9 1142 aa27.1■■□□□ 1.93
COL15A1-203ENST00000471477 DCAF17Q5H9S7 520 aaPredicted RBP27.1■■□□□ 1.93
COL15A1-203ENST00000471477 RSPO2Q6UXX9 243 aaPredicted RBP27.1■■□□□ 1.93
COL15A1-203ENST00000471477 PPFIBP1Q86W92 1011 aa27.1■■□□□ 1.93
COL15A1-203ENST00000471477 HLA-CQ95604 372 aa27.1■■□□□ 1.93
COL15A1-203ENST00000471477 BACE2Q9Y5Z0 518 aa27.1■■□□□ 1.93
COL15A1-203ENST00000471477 ARHGEF37A1IGU5 675 aa27.09■■□□□ 1.93
COL15A1-203ENST00000471477 H7C4K7 107 aa27.09■■□□□ 1.93
COL15A1-203ENST00000471477 VNN1O95497 513 aa27.09■■□□□ 1.93
COL15A1-203ENST00000471477 EPCAMP16422 314 aa27.09■■□□□ 1.93
COL15A1-203ENST00000471477 LTBRP36941 435 aa27.09■■□□□ 1.93
COL15A1-203ENST00000471477 MYL6P60660 151 aa27.09■■□□□ 1.93
COL15A1-203ENST00000471477 DLX2Q07687 328 aaPredicted RBP27.09■■□□□ 1.93
COL15A1-203ENST00000471477 TCERG1LQ5VWI1 586 aa27.09■■□□□ 1.93
COL15A1-203ENST00000471477 ZNF280DQ6N043 979 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms