RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 SLC44A4Q53GD3 710 aa7.81□□□□□ -1.16
SMC5-202ENST00000471372 MFSD14BQ5SR56 506 aa7.81□□□□□ -1.16
SMC5-202ENST00000471372 LMBRD2Q68DH5 695 aaPredicted RBP7.81□□□□□ -1.16
SMC5-202ENST00000471372 MPP5Q8N3R9 675 aa7.81□□□□□ -1.16
SMC5-202ENST00000471372 LINC00482Q8N8I6 264 aa7.81□□□□□ -1.16
SMC5-202ENST00000471372 IL17RDQ8NFM7 739 aa7.81□□□□□ -1.16
SMC5-202ENST00000471372 NUDT10Q8NFP7 164 aa7.81□□□□□ -1.16
SMC5-202ENST00000471372 FAM71BQ8TC56 605 aa7.81□□□□□ -1.16
SMC5-202ENST00000471372 GCDHQ92947 438 aaPredicted RBP7.81□□□□□ -1.16
SMC5-202ENST00000471372 USP13Q92995 863 aaPredicted RBP7.81□□□□□ -1.16
SMC5-202ENST00000471372 ZBTB8AQ96BR9 441 aa7.81□□□□□ -1.16
SMC5-202ENST00000471372 NUDT11Q96G61 164 aa7.81□□□□□ -1.16
SMC5-202ENST00000471372 CEP95Q96GE4 821 aa7.81□□□□□ -1.16
SMC5-202ENST00000471372 FAM167BQ9BTA0 163 aa7.81□□□□□ -1.16
SMC5-202ENST00000471372 KIAA1683Q9H0B3 1180 aa7.81□□□□□ -1.16
SMC5-202ENST00000471372 BRD9Q9H8M2 597 aa7.81□□□□□ -1.16
SMC5-202ENST00000471372 MOCS1Q9NZB8 636 aa7.81□□□□□ -1.16
SMC5-202ENST00000471372 IFT80Q9P2H3 777 aaPredicted RBP7.81□□□□□ -1.16
SMC5-202ENST00000471372 ZNF212Q9UDV6 495 aa7.81□□□□□ -1.16
SMC5-202ENST00000471372 SCAF8Q9UPN6 1271 aaKnown RBP7.81□□□□□ -1.16
SMC5-202ENST00000471372 CTDP1Q9Y5B0 961 aaPredicted RBP7.81□□□□□ -1.16
SMC5-202ENST00000471372 ZMYM3Q14202 1370 aa7.81□□□□□ -1.16
SMC5-202ENST00000471372 TTBK1Q5TCY1 1321 aaPredicted RBP7.8□□□□□ -1.16
SMC5-202ENST00000471372 TCRBV7S2A1N4TA0A589 114 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 PRSS47A8MTI9 375 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 PIP5K1BO14986 540 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 TEX33O43247 280 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 MTSS1O43312 755 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 DNAJB5O75953 348 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 UNC5CO95185 931 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 GJB1P08034 283 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 CKMT1AP12532 417 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 IGFBP6P24592 240 aaPredicted RBP7.8□□□□□ -1.16
SMC5-202ENST00000471372 CNTFP26441 200 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 GABRB3P28472 473 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 SLC6A4P31645 630 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 CASRP41180 1078 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 MEOX1P50221 254 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 CNGB1Q14028 1251 aaPredicted RBP7.8□□□□□ -1.16
SMC5-202ENST00000471372 ARHGAP15Q53QZ3 475 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 DCAF12L1Q5VU92 463 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 SLC15A4Q8N697 577 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 DNAJC5GQ8N7S2 189 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 TTLL6Q8N841 843 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 VGLL2Q8N8G2 317 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 STT3BQ8TCJ2 826 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 EIF2AQ9BY44 585 aaKnown RBP7.8□□□□□ -1.16
SMC5-202ENST00000471372 INO80BQ9C086 356 aaPredicted RBP7.8□□□□□ -1.16
SMC5-202ENST00000471372 KCNH6Q9H252 994 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 A1CFQ9NQ94 594 aaKnown RBP7.8□□□□□ -1.16
SMC5-202ENST00000471372 SIRT5Q9NXA8 310 aa7.8□□□□□ -1.16
SMC5-202ENST00000471372 A0A087WZ62 844 aa7.79□□□□□ -1.16
SMC5-202ENST00000471372 MBD3L4A6NDZ8 208 aaPredicted RBP7.79□□□□□ -1.16
SMC5-202ENST00000471372 MBD3L3A6NE82 208 aaPredicted RBP7.79□□□□□ -1.16
SMC5-202ENST00000471372 TISP43B9A030 160 aa7.79□□□□□ -1.16
SMC5-202ENST00000471372 B9A039 149 aa7.79□□□□□ -1.16
SMC5-202ENST00000471372 KIAA0391O15091 583 aaKnown RBP7.79□□□□□ -1.16
SMC5-202ENST00000471372 CYP7B1O75881 506 aa7.79□□□□□ -1.16
SMC5-202ENST00000471372 POLBP06746 335 aa7.79□□□□□ -1.16
SMC5-202ENST00000471372 MTHFD1P11586 935 aaKnown RBP7.79□□□□□ -1.16
SMC5-202ENST00000471372 PFKLP17858 780 aa7.79□□□□□ -1.16
SMC5-202ENST00000471372 SLC11A2P49281 568 aa7.79□□□□□ -1.16
SMC5-202ENST00000471372 ATP2B3Q16720 1220 aa7.79□□□□□ -1.16
SMC5-202ENST00000471372 FAM26FQ5R3K3 315 aa7.79□□□□□ -1.16
SMC5-202ENST00000471372 SULT6B1Q6IMI4 303 aa7.79□□□□□ -1.16
SMC5-202ENST00000471372 RETSATQ6NUM9 610 aa7.79□□□□□ -1.16
SMC5-202ENST00000471372 BORAQ6PGQ7 559 aa7.79□□□□□ -1.16
SMC5-202ENST00000471372 USP49Q70CQ1 688 aa7.79□□□□□ -1.16
SMC5-202ENST00000471372 IGDCC3Q8IVU1 814 aa7.79□□□□□ -1.16
SMC5-202ENST00000471372 NEUROD6Q96NK8 337 aa7.79□□□□□ -1.16
SMC5-202ENST00000471372 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.79□□□□□ -1.16
SMC5-202ENST00000471372 RGL1Q9NZL6 768 aa7.79□□□□□ -1.16
SMC5-202ENST00000471372 NRBP1Q9UHY1 535 aa7.79□□□□□ -1.16
SMC5-202ENST00000471372 MBD1Q9UIS9 605 aaPredicted RBP7.79□□□□□ -1.16
SMC5-202ENST00000471372 SLC45A2Q9UMX9 530 aa7.79□□□□□ -1.16
SMC5-202ENST00000471372 A0A087WWL8 130 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 SNX2O60749 519 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 MBD4O95243 580 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 GLI1P08151 1106 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 TXNP10599 105 aaKnown RBP7.78□□□□□ -1.16
SMC5-202ENST00000471372 RARBP10826 455 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 KLRC1P26715 233 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 IL13P35225 146 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 LIMS1P48059 325 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 RRADP55042 308 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 UCP3P55916 312 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 PSMC1P62191 440 aaKnown RBP7.78□□□□□ -1.16
SMC5-202ENST00000471372 MPP1Q00013 466 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 PRR31Q5SQ13 230 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 MCTP1Q6DN14 999 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 OTUD7BQ6GQQ9 843 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 C1orf122Q6ZSJ8 110 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 MOGAT3Q86VF5 341 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 SDR16C5Q8N3Y7 309 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 ASB12Q8WXK4 309 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 RILPL2Q969X0 211 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 NELL2Q99435 816 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 SEC62Q99442 399 aaKnown RBP7.78□□□□□ -1.16
SMC5-202ENST00000471372 CNPPD1Q9BV87 410 aa7.78□□□□□ -1.16
SMC5-202ENST00000471372 PACSIN1Q9BY11 444 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms