RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 KRT81Q14533 505 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 Q3C1V9 767 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 CCDC153Q494R4 210 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 SFT2D3Q587I9 215 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 DCAF17Q5H9S7 520 aaPredicted RBP4.46□□□□□ -1.7
VPS50-210ENST00000471188 RABGAP1LQ5R372 815 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 HP1BP3Q5SSJ5 553 aaPredicted RBP4.46□□□□□ -1.7
VPS50-210ENST00000471188 PAOXQ6QHF9 649 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 SV2BQ7L1I2 683 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 NLRP10Q86W26 655 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 SCAIQ8N9R8 606 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.46□□□□□ -1.7
VPS50-210ENST00000471188 RFWD2Q8NHY2 731 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 SLC35G2Q8TBE7 412 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 SYN2Q92777 582 aaPredicted RBP4.46□□□□□ -1.7
VPS50-210ENST00000471188 CNBD2Q96M20 576 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 PWWP2AQ96N64 755 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 HNRNPABQ99729 332 aaKnown RBP4.46□□□□□ -1.7
VPS50-210ENST00000471188 CCT7Q99832 543 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 TRIM55Q9BYV6 548 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 ANKRD2Q9GZV1 360 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 PAIP1Q9H074 479 aaKnown RBP4.46□□□□□ -1.7
VPS50-210ENST00000471188 TRABDQ9H4I3 376 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 GPBP1L1Q9HC44 474 aaPredicted RBP4.46□□□□□ -1.7
VPS50-210ENST00000471188 GPR108Q9NPR9 543 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 TBC1D23Q9NUY8 699 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 TBCCD1Q9NVR7 557 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 RRN3Q9NYV6 651 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 ANKFY1Q9P2R3 1169 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 THEGQ9P2T0 379 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 DDX25Q9UHL0 483 aaKnown RBP4.46□□□□□ -1.7
VPS50-210ENST00000471188 PRELID1Q9Y255 219 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.46□□□□□ -1.7
VPS50-210ENST00000471188 RABGAP1Q9Y3P9 1069 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 FLT1P17948 1338 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 C2orf71A6NGG8 1288 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 C2CD2LO14523 706 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 TTC4O95801 387 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 PDE6AP16499 860 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 SLC9A1P19634 815 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 S100A1P23297 94 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 PMLP29590 882 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 CHKAP35790 457 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 TRAPPC10P48553 1259 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 ENTPD1P49961 510 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 DRG2P55039 364 aaKnown RBP4.46□□□□□ -1.7
VPS50-210ENST00000471188 MYBPC2Q14324 1141 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 LETM2Q2VYF4 491 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 AKAP4Q5JQC9 854 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 METTL24Q5JXM2 366 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 METTL21CQ5VZV1 264 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 LVRNQ6Q4G3 990 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 UNC13DQ70J99 1090 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 TTC7BQ86TV6 843 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 TRIML2Q8N7C3 387 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 UBL4BQ8N7F7 174 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 MAGEB6Q8N7X4 407 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 ABTB2Q8N961 1025 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 MIGA1Q8NAN2 632 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 RNF169Q8NCN4 708 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 DDHD1Q8NEL9 900 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 MAML1Q92585 1016 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 GPKOWQ92917 476 aaPredicted RBP eCLIP4.46□□□□□ -1.7
VPS50-210ENST00000471188 PRR11Q96HE9 360 aaPredicted RBP4.46□□□□□ -1.7
VPS50-210ENST00000471188 HES6Q96HZ4 224 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 DCUN1D5Q9BTE7 237 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 TLE6Q9H808 572 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 ANLNQ9NQW6 1124 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 ATAD3AQ9NVI7 634 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 PCDHGC3Q9UN70 934 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 AMOTL2Q9Y2J4 779 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 COQ6Q9Y2Z9 468 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 FAM32AQ9Y421 112 aaKnown RBP4.46□□□□□ -1.7
VPS50-210ENST00000471188 KIF1AQ12756 1690 aa4.46□□□□□ -1.7
VPS50-210ENST00000471188 ALS2Q96Q42 1657 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 SFI1A8K8P3 1242 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 RSPH10B2B2RC85 870 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 H3BSA7 217 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 RSPH10BP0C881 870 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 VEGFAP15692 232 aaPredicted RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 PEX2P28328 305 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 CTHP32929 405 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 RPA3P35244 121 aaPredicted RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 ADCY8P40145 1251 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 MCAMP43121 646 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 KPNA1P52294 538 aaPredicted RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 FOLH1Q04609 750 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 LRRC63Q05C16 580 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 MYLK3Q32MK0 819 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 TRMT5Q32P41 509 aaKnown RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 ANKRD20A4Q4UJ75 823 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 TNFAIP8L3Q5GJ75 292 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 DCAF12L1Q5VU92 463 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 TTC27Q6P3X3 843 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 ILDR2Q71H61 639 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 ZNF598Q86UK7 904 aaKnown RBP4.45□□□□□ -1.7
VPS50-210ENST00000471188 ZBTB46Q86UZ6 589 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 CROCCP3Q8IVE0 287 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 GALNT4Q8N4A0 578 aa4.45□□□□□ -1.7
VPS50-210ENST00000471188 POU5F2Q8N7G0 328 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms