RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 PCDHA1Q9Y5I3 950 aa7.02□□□□□ -1.29
SSB-209ENST00000470621 H3BUI4 141 aa7.01□□□□□ -1.29
SSB-209ENST00000470621 UBXN7O94888 489 aa7.01□□□□□ -1.29
SSB-209ENST00000470621 SPDEFO95238 335 aa7.01□□□□□ -1.29
SSB-209ENST00000470621 GPANK1O95872 356 aa7.01□□□□□ -1.29
SSB-209ENST00000470621 MAKP20794 623 aa7.01□□□□□ -1.29
SSB-209ENST00000470621 ACVRL1P37023 503 aa7.01□□□□□ -1.29
SSB-209ENST00000470621 PIK3CGP48736 1102 aa7.01□□□□□ -1.29
SSB-209ENST00000470621 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.01□□□□□ -1.29
SSB-209ENST00000470621 OVCH2Q7RTZ1 564 aa7.01□□□□□ -1.29
SSB-209ENST00000470621 PDPRQ8NCN5 879 aa7.01□□□□□ -1.29
SSB-209ENST00000470621 NSUN7Q8NE18 718 aaKnown RBP7.01□□□□□ -1.29
SSB-209ENST00000470621 KLHDC4Q8TBB5 520 aa7.01□□□□□ -1.29
SSB-209ENST00000470621 TNPO1Q92973 898 aaKnown RBP7.01□□□□□ -1.29
SSB-209ENST00000470621 NACC2Q96BF6 587 aa7.01□□□□□ -1.29
SSB-209ENST00000470621 RNF31Q96EP0 1072 aa7.01□□□□□ -1.29
SSB-209ENST00000470621 NT5C1BQ96P26 610 aa7.01□□□□□ -1.29
SSB-209ENST00000470621 IMPG2Q9BZV3 1241 aa7.01□□□□□ -1.29
SSB-209ENST00000470621 WDCPQ9H6R7 721 aa7.01□□□□□ -1.29
SSB-209ENST00000470621 SIDT1Q9NXL6 827 aaKnown RBP7.01□□□□□ -1.29
SSB-209ENST00000470621 STAP2Q9UGK3 403 aa7.01□□□□□ -1.29
SSB-209ENST00000470621 ZNF785A8K8V0 405 aa7□□□□□ -1.29
SSB-209ENST00000470621 H3BML4 177 aa7□□□□□ -1.29
SSB-209ENST00000470621 ARIH2O95376 493 aa7□□□□□ -1.29
SSB-209ENST00000470621 ABHD16AO95870 558 aa7□□□□□ -1.29
SSB-209ENST00000470621 GJB1P08034 283 aa7□□□□□ -1.29
SSB-209ENST00000470621 FTH1P19P0C7X4 201 aa7□□□□□ -1.29
SSB-209ENST00000470621 DDX6P26196 483 aaKnown RBP eCLIP7□□□□□ -1.29
SSB-209ENST00000470621 HTR1BP28222 390 aa7□□□□□ -1.29
SSB-209ENST00000470621 CXADRP78310 365 aa7□□□□□ -1.29
SSB-209ENST00000470621 ABHD18Q0P651 414 aa7□□□□□ -1.29
SSB-209ENST00000470621 KCNV1Q6PIU1 500 aa7□□□□□ -1.29
SSB-209ENST00000470621 Q6ZPA2 131 aa7□□□□□ -1.29
SSB-209ENST00000470621 C14orf80Q86SX3 495 aa7□□□□□ -1.29
SSB-209ENST00000470621 FMNL3Q8IVF7 1028 aa7□□□□□ -1.29
SSB-209ENST00000470621 MYO1HQ8N1T3 1032 aa7□□□□□ -1.29
SSB-209ENST00000470621 Q8NA96 180 aa7□□□□□ -1.29
SSB-209ENST00000470621 SLC17A8Q8NDX2 589 aa7□□□□□ -1.29
SSB-209ENST00000470621 NEU4Q8WWR8 484 aaPredicted RBP7□□□□□ -1.29
SSB-209ENST00000470621 PNKPQ96T60 521 aa7□□□□□ -1.29
SSB-209ENST00000470621 ALOXE3Q9BYJ1 711 aa7□□□□□ -1.29
SSB-209ENST00000470621 BRD9Q9H8M2 597 aa7□□□□□ -1.29
SSB-209ENST00000470621 DDX20Q9UHI6 824 aaKnown RBP7□□□□□ -1.29
SSB-209ENST00000470621 AGAP1Q9UPQ3 857 aa7□□□□□ -1.29
SSB-209ENST00000470621 A6NNZ2 444 aa6.99□□□□□ -1.29
SSB-209ENST00000470621 B3GALT2O43825 422 aa6.99□□□□□ -1.29
SSB-209ENST00000470621 CDKL5O76039 1030 aa6.99□□□□□ -1.29
SSB-209ENST00000470621 PARNO95453 639 aaKnown RBP6.99□□□□□ -1.29
SSB-209ENST00000470621 ADH4P08319 380 aa6.99□□□□□ -1.29
SSB-209ENST00000470621 GNAI3P08754 354 aa6.99□□□□□ -1.29
SSB-209ENST00000470621 MCM7P33993 719 aa6.99□□□□□ -1.29
SSB-209ENST00000470621 BMPR1AP36894 532 aa6.99□□□□□ -1.29
SSB-209ENST00000470621 RAB1AP62820 205 aa6.99□□□□□ -1.29
SSB-209ENST00000470621 GNAI1P63096 354 aa6.99□□□□□ -1.29
SSB-209ENST00000470621 EXOSC9Q06265 439 aaKnown RBP6.99□□□□□ -1.29
SSB-209ENST00000470621 SCAPQ12770 1279 aa6.99□□□□□ -1.29
SSB-209ENST00000470621 ASB10Q8WXI3 467 aa6.99□□□□□ -1.29
SSB-209ENST00000470621 LRIG1Q96JA1 1093 aa6.99□□□□□ -1.29
SSB-209ENST00000470621 CDK5RAP3Q96JB5 506 aa6.99□□□□□ -1.29
SSB-209ENST00000470621 KCNE5Q9UJ90 142 aa6.99□□□□□ -1.29
SSB-209ENST00000470621 MTO1Q9Y2Z2 717 aaKnown RBP6.99□□□□□ -1.29
SSB-209ENST00000470621 OVOL3O00110 214 aa6.98□□□□□ -1.29
SSB-209ENST00000470621 KRT4P19013 534 aa6.98□□□□□ -1.29
SSB-209ENST00000470621 HDCP19113 662 aa6.98□□□□□ -1.29
SSB-209ENST00000470621 HMGA2P52926 109 aa6.98□□□□□ -1.29
SSB-209ENST00000470621 MC2RQ01718 297 aa6.98□□□□□ -1.29
SSB-209ENST00000470621 KIF22Q14807 665 aa6.98□□□□□ -1.29
SSB-209ENST00000470621 CYP2A13Q16696 494 aa6.98□□□□□ -1.29
SSB-209ENST00000470621 GEN1Q17RS7 908 aa6.98□□□□□ -1.29
SSB-209ENST00000470621 MINDY4Q4G0A6 757 aa6.98□□□□□ -1.29
SSB-209ENST00000470621 CRB2Q5IJ48 1285 aa6.98□□□□□ -1.29
SSB-209ENST00000470621 VRK3Q8IV63 474 aa6.98□□□□□ -1.29
SSB-209ENST00000470621 ARHGEF19Q8IW93 802 aa6.98□□□□□ -1.29
SSB-209ENST00000470621 WDR75Q8IWA0 830 aaKnown RBP6.98□□□□□ -1.29
SSB-209ENST00000470621 B3GNT5Q9BYG0 378 aa6.98□□□□□ -1.29
SSB-209ENST00000470621 WDR11Q9BZH6 1224 aa6.98□□□□□ -1.29
SSB-209ENST00000470621 METTL14Q9HCE5 456 aaKnown RBP6.98□□□□□ -1.29
SSB-209ENST00000470621 CTTNBP2NLQ9P2B4 639 aa6.98□□□□□ -1.29
SSB-209ENST00000470621 CTNND1O60716 968 aaKnown RBP6.97□□□□□ -1.29
SSB-209ENST00000470621 ERN1O75460 977 aaKnown RBP6.97□□□□□ -1.29
SSB-209ENST00000470621 SLPIP03973 132 aa6.97□□□□□ -1.29
SSB-209ENST00000470621 HLA-DOAP06340 250 aa6.97□□□□□ -1.29
SSB-209ENST00000470621 IL12RB1P42701 662 aa6.97□□□□□ -1.29
SSB-209ENST00000470621 GDF5P43026 501 aa6.97□□□□□ -1.29
SSB-209ENST00000470621 ZNF135P52742 658 aaPredicted RBP6.97□□□□□ -1.29
SSB-209ENST00000470621 GUCY1B3Q02153 619 aa6.97□□□□□ -1.29
SSB-209ENST00000470621 LY6G5CQ5SRR4 150 aa6.97□□□□□ -1.29
SSB-209ENST00000470621 SWSAP1Q6NVH7 229 aa6.97□□□□□ -1.29
SSB-209ENST00000470621 FOXR2Q6PJQ5 311 aa6.97□□□□□ -1.29
SSB-209ENST00000470621 PDSS2Q86YH6 399 aa6.97□□□□□ -1.29
SSB-209ENST00000470621 CFAP52Q8N1V2 620 aa6.97□□□□□ -1.29
SSB-209ENST00000470621 SCAMP4Q969E2 229 aa6.97□□□□□ -1.29
SSB-209ENST00000470621 FAM167AQ96KS9 214 aa6.97□□□□□ -1.29
SSB-209ENST00000470621 PCED1AQ9H1Q7 454 aa6.97□□□□□ -1.29
SSB-209ENST00000470621 GNL3LQ9NVN8 582 aaKnown RBP6.97□□□□□ -1.29
SSB-209ENST00000470621 RNF181Q9P0P0 153 aa6.97□□□□□ -1.29
SSB-209ENST00000470621 PCDHA6Q9UN73 950 aa6.97□□□□□ -1.29
SSB-209ENST00000470621 NOX1Q9Y5S8 564 aa6.97□□□□□ -1.29
SSB-209ENST00000470621 A0A088AWK7 358 aa6.96□□□□□ -1.3
SSB-209ENST00000470621 VSTM5A8MXK1 200 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms