RNA–Protein interactions for RNA: ENST00000470600.1

TGFBR3-206, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 2

Gene TGFBR3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-206ENST00000470600 MLKLQ8NB16 471 aa9.36□□□□□ -0.91
TGFBR3-206ENST00000470600 OR10T2Q8NGX3 314 aa9.36□□□□□ -0.91
TGFBR3-206ENST00000470600 CEP63Q96MT8 703 aa9.36□□□□□ -0.91
TGFBR3-206ENST00000470600 TMEM209Q96SK2 561 aa9.36□□□□□ -0.91
TGFBR3-206ENST00000470600 CRISPLD1Q9H336 500 aa9.36□□□□□ -0.91
TGFBR3-206ENST00000470600 SLC38A7Q9NVC3 462 aa9.36□□□□□ -0.91
TGFBR3-206ENST00000470600 GDAP2Q9NXN4 497 aa9.36□□□□□ -0.91
TGFBR3-206ENST00000470600 L1RE1Q9UN81 338 aa9.36□□□□□ -0.91
TGFBR3-206ENST00000470600 PCDHB12Q9Y5F1 795 aa9.36□□□□□ -0.91
TGFBR3-206ENST00000470600 TTC28Q96AY4 2481 aa9.36□□□□□ -0.91
TGFBR3-206ENST00000470600 SF3B1O75533 1304 aaKnown RBP eCLIP9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 PSMA7O14818 248 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 TEX28O15482 410 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 CALUO43852 315 aaPredicted RBP9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 CLASP2O75122 1294 aaKnown RBP9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 B3GAT3O94766 335 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 OAZ2O95190 189 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 ERCC5P28715 1186 aaPredicted RBP9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 ALDH7A1P49419 539 aaKnown RBP9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 CLCN4P51793 760 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 FKBP3Q00688 224 aaKnown RBP9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 RNASELQ05823 741 aaKnown RBP9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 TYRO3Q06418 890 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 ADAM15Q13444 863 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 IQCB1Q15051 598 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 SOWAHAQ2M3V2 549 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 PLPP4Q5VZY2 271 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 SLC8B1Q6J4K2 584 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 KLHL10Q6JEL2 608 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 SYCE2Q6PIF2 218 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 FILIP1Q7Z7B0 1213 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 TAS1R2Q8TE23 839 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 TMEM169Q96HH4 297 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 KLHL5Q96PQ7 755 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 TCF25Q9BQ70 676 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 GTPBP4Q9BZE4 634 aaKnown RBP9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 NSUN3Q9H649 340 aaKnown RBP9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 AAASQ9NRG9 546 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 TMEM30AQ9NV96 361 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 FNIP2Q9P278 1114 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 CDH22Q9UJ99 828 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 ITGA11Q9UKX5 1188 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 KIF26AQ9ULI4 1882 aaPredicted RBP9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 PCDHB8Q9UN66 801 aa9.35□□□□□ -0.91
TGFBR3-206ENST00000470600 WDR27A2RRH5 827 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 IKBKBO14920 756 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 ASS1P00966 412 aaKnown RBP9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 DLATP10515 647 aaKnown RBP9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 FOSL2P15408 326 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 RPL17P18621 184 aaKnown RBP9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 TYMPP19971 482 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 PSMC2P35998 433 aaKnown RBP9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 PPP1R2P41236 205 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 MATR3P43243 847 aaKnown RBP eCLIP9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 ASPAP45381 313 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 GLUD2P49448 558 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 VAMP7P51809 220 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 MYL6P60660 151 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 TFAMQ00059 246 aaKnown RBP9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 VARS2Q5ST30 1063 aaKnown RBP9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 CEP135Q66GS9 1140 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 SPOPLQ6IQ16 392 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 FRMD5Q7Z6J6 570 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 DHX40Q8IX18 779 aaKnown RBP9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 EFHBQ8N7U6 833 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 ENOX1Q8TC92 643 aaKnown RBP9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 WHAMMQ8TF30 809 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 CCDC127Q96BQ5 260 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 SENP8Q96LD8 212 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 COLEC11Q9BWP8 271 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 BCO2Q9BYV7 579 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 S1PR5Q9H228 398 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 SAMSN1Q9NSI8 373 aaKnown RBP9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 TMLHEQ9NVH6 421 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 HOOK1Q9UJC3 728 aaKnown RBP9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 AJAP1Q9UKB5 411 aaPredicted RBP9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 POLIQ9UNA4 740 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 AGAP1Q9UPQ3 857 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 NUB1Q9Y5A7 615 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 BACE2Q9Y5Z0 518 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 HCFC2Q9Y5Z7 792 aa9.34□□□□□ -0.91
TGFBR3-206ENST00000470600 COL4A2P08572 1712 aa9.34□□□□□ -0.92
TGFBR3-206ENST00000470600 ANAPC1Q9H1A4 1944 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 CARNS1A5YM72 827 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 SYN3O14994 580 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 PER2O15055 1255 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 ABLIM3O94929 683 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 KIF20AO95235 890 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 HLA-DRAP01903 254 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 EPCAMP16422 314 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 GCLMP48507 274 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 SMC1AQ14683 1233 aaKnown RBP9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 DUOXA2Q1HG44 320 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 USP41Q3LFD5 358 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 ZSCAN23Q3MJ62 389 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 CT47A1Q5JQC4 288 aaPredicted RBP9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 FAM171A1Q5VUB5 890 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 WSCD1Q658N2 575 aa9.33□□□□□ -0.92
TGFBR3-206ENST00000470600 INTS8Q75QN2 995 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms