RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 SMYD3Q9H7B4 428 aa10.08□□□□□ -0.8
NHLRC3-203ENST00000470258 FCHO1O14526 889 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 MAGEB3O15480 346 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 FAM13AO94988 1023 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 SGPL1O95470 568 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 NOP14P78316 857 aaKnown RBP10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 COG7P83436 770 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 BTKQ06187 659 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 PTK6Q13882 451 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 TTLL12Q14166 644 aaPredicted RBP10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 PRR16Q569H4 304 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 LPCAT4Q643R3 524 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 RGS9BPQ6ZS82 235 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 ALYREFQ86V81 257 aaKnown RBP10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 PCDHB18PQ96TA0 734 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 PPARGC1AQ9UBK2 798 aaKnown RBP10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 ANAPC7Q9UJX3 599 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 ZNF510Q9Y2H8 683 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 SLC16A3O15427 465 aaKnown RBP10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 BANF1O75531 89 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 TCEA3O75764 348 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 MYL2P10916 166 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 RXRBP28702 533 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 IL6STP40189 918 aaPredicted RBP10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 GRIA2P42262 883 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 CAV1Q03135 178 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 C2CD6Q53TS8 623 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 SCUBE1Q8IWY4 988 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 NCSTNQ92542 709 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 ELMO3Q96BJ8 720 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 NMUR2Q9GZQ4 415 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 BTG4Q9NY30 223 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 SERPINA10Q9UK55 444 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 ATP8B3O60423 1300 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 FRMPD4Q14CM0 1322 aa10.07□□□□□ -0.8
NHLRC3-203ENST00000470258 GTPBP10A4D1E9 387 aaKnown RBP10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 GYS1P13807 737 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 ATP6V1B1P15313 513 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 FUT4P22083 530 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 HIBADHP31937 336 aaKnown RBP10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 RASA2Q15283 850 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 MMEL1Q495T6 779 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 KAZNQ674X7 775 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 DPY19L2Q6NUT2 758 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 RBM44Q6ZP01 1051 aaKnown RBP10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 ARHGEF19Q8IW93 802 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 TCP10LQ8TDR4 215 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 CCDC124Q96CT7 223 aaKnown RBP10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 MTBPQ96DY7 904 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 SYT11Q9BT88 431 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 TUBB6Q9BUF5 446 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 PCIF1Q9H4Z3 704 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 MANSC1Q9H8J5 431 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 SLC17A7Q9P2U7 560 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 TRPC5Q9UL62 973 aaPredicted RBP10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 NEU2Q9Y3R4 380 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 MEI4A8MW99 385 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 PRPF4O43172 522 aaKnown RBP eCLIP10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 CYP26A1O43174 497 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 TGFB1I1O43294 461 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 SORBS3O60504 671 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 ZSCAN5DPP0CG00 497 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 EEF2P13639 858 aaKnown RBP10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 ADARP55265 1226 aaKnown RBP10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 PDIA2Q13087 525 aaKnown RBP10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 EFTUD2Q15029 972 aaKnown RBP eCLIP10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 PPM1KQ8N3J5 372 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 CCDC89Q8N998 374 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 STKLD1Q8NE28 680 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 OR6Y1Q8NGX8 325 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 PRPF31Q8WWY3 499 aaKnown RBP10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 TTC25Q96NG3 672 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 SLC4A9Q96Q91 983 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 DCLK3Q9C098 648 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 PSTPIP2Q9H939 334 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 MARCOQ9UEW3 520 aaPredicted RBP10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 USTQ9Y2C2 406 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 TDRKHQ9Y2W6 561 aaKnown RBP10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 A0A0J9YVX5 310 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 FAM237BA0A1B0GVD1 139 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 SPDYE16A6NNV3 312 aaPredicted RBP10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 A8MXQ7 604 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 CALCAP01258 141 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 IFNB1P01574 187 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 KITP10721 976 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 RALAP11233 206 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 GCAP28676 217 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 MAPK4P31152 587 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 GCLMP48507 274 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 CDK8P49336 464 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 EVA1CP58658 441 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 HPCAP84074 193 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 CDK16Q00536 496 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 SFSWAPQ12872 951 aaKnown RBP10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 GRAMD1BQ3KR37 738 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 SLC30A10Q6XR72 485 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 ZNF804AQ7Z570 1209 aa10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 C12orf50Q8NA57 414 aaPredicted RBP10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 RBM15BQ8NDT2 890 aaKnown RBP10.06□□□□□ -0.8
NHLRC3-203ENST00000470258 SLC26A7Q8TE54 656 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms