RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 CD302Q8IX05 232 aa19.01■□□□□ 0.63
COL7A1-208ENST00000470076 BEST2Q8NFU1 509 aa19.01■□□□□ 0.63
COL7A1-208ENST00000470076 TCEAL4Q96EI5 215 aa19.01■□□□□ 0.63
COL7A1-208ENST00000470076 NELL2Q99435 816 aa19.01■□□□□ 0.63
COL7A1-208ENST00000470076 PLA2G2FQ9BZM2 168 aa19.01■□□□□ 0.63
COL7A1-208ENST00000470076 FRYLO94915 3013 aa19■□□□□ 0.63
COL7A1-208ENST00000470076 A0A0B4J269 797 aa19■□□□□ 0.63
COL7A1-208ENST00000470076 LMNAP02545 664 aaKnown RBP19■□□□□ 0.63
COL7A1-208ENST00000470076 SP9P0CG40 484 aa19■□□□□ 0.63
COL7A1-208ENST00000470076 PAX3P23760 479 aa19■□□□□ 0.63
COL7A1-208ENST00000470076 CCR2P41597 374 aa19■□□□□ 0.63
COL7A1-208ENST00000470076 MAGEA9P43362 315 aa19■□□□□ 0.63
COL7A1-208ENST00000470076 GTF2BQ00403 316 aa19■□□□□ 0.63
COL7A1-208ENST00000470076 GRIN1Q05586 938 aa19■□□□□ 0.63
COL7A1-208ENST00000470076 TWF1Q12792 350 aa19■□□□□ 0.63
COL7A1-208ENST00000470076 ZBTB41Q5SVQ8 909 aa19■□□□□ 0.63
COL7A1-208ENST00000470076 DSTYKQ6XUX3 929 aa19■□□□□ 0.63
COL7A1-208ENST00000470076 KCNG4Q8TDN1 519 aa19■□□□□ 0.63
COL7A1-208ENST00000470076 LARP4BQ92615 738 aaKnown RBP19■□□□□ 0.63
COL7A1-208ENST00000470076 DNASE1L2Q92874 299 aa19■□□□□ 0.63
COL7A1-208ENST00000470076 MSTO1Q9BUK6 570 aa19■□□□□ 0.63
COL7A1-208ENST00000470076 ZHX3Q9H4I2 956 aa19■□□□□ 0.63
COL7A1-208ENST00000470076 ZFP14Q9HCL3 533 aa19■□□□□ 0.63
COL7A1-208ENST00000470076 LTB4R2Q9NPC1 389 aa19■□□□□ 0.63
COL7A1-208ENST00000470076 ASAH2Q9NR71 780 aa19■□□□□ 0.63
COL7A1-208ENST00000470076 CEP72Q9P209 647 aa19■□□□□ 0.63
COL7A1-208ENST00000470076 TIMM13Q9Y5L4 95 aaPredicted RBP19■□□□□ 0.63
COL7A1-208ENST00000470076 R4GN57 208 aa19■□□□□ 0.63
COL7A1-208ENST00000470076 COL4A3Q01955 1670 aa18.99■□□□□ 0.63
COL7A1-208ENST00000470076 F5P12259 2224 aa18.99■□□□□ 0.63
COL7A1-208ENST00000470076 OR6C75A6NL08 312 aa18.99■□□□□ 0.63
COL7A1-208ENST00000470076 FAM170BA6NMN3 283 aa18.99■□□□□ 0.63
COL7A1-208ENST00000470076 FCARP24071 287 aa18.99■□□□□ 0.63
COL7A1-208ENST00000470076 EPHA5P54756 1037 aa18.99■□□□□ 0.63
COL7A1-208ENST00000470076 PLD1Q13393 1074 aa18.99■□□□□ 0.63
COL7A1-208ENST00000470076 FAM78AQ5JUQ0 283 aa18.99■□□□□ 0.63
COL7A1-208ENST00000470076 SPATA1Q5VX52 437 aa18.99■□□□□ 0.63
COL7A1-208ENST00000470076 TPRG1Q6ZUI0 275 aa18.99■□□□□ 0.63
COL7A1-208ENST00000470076 MAP4K3Q8IVH8 894 aa18.99■□□□□ 0.63
COL7A1-208ENST00000470076 TMEM130Q8N3G9 435 aa18.99■□□□□ 0.63
COL7A1-208ENST00000470076 ASB16Q96NS5 453 aa18.99■□□□□ 0.63
COL7A1-208ENST00000470076 FIZ1Q96SL8 496 aa18.99■□□□□ 0.63
COL7A1-208ENST00000470076 CCSER1Q9C0I3 900 aa18.99■□□□□ 0.63
COL7A1-208ENST00000470076 CPSF3Q9UKF6 684 aaKnown RBP18.99■□□□□ 0.63
COL7A1-208ENST00000470076 PATJQ8NI35 1801 aa18.98■□□□□ 0.63
COL7A1-208ENST00000470076 NCAM2O15394 837 aa18.98■□□□□ 0.63
COL7A1-208ENST00000470076 MYL4P12829 197 aa18.98■□□□□ 0.63
COL7A1-208ENST00000470076 TYMPP19971 482 aa18.98■□□□□ 0.63
COL7A1-208ENST00000470076 PDCP20941 246 aa18.98■□□□□ 0.63
COL7A1-208ENST00000470076 CD72P21854 359 aa18.98■□□□□ 0.63
COL7A1-208ENST00000470076 DDIT3P35638 169 aa18.98■□□□□ 0.63
COL7A1-208ENST00000470076 GPR17Q13304 367 aa18.98■□□□□ 0.63
COL7A1-208ENST00000470076 SLC39A4Q6P5W5 647 aa18.98■□□□□ 0.63
COL7A1-208ENST00000470076 ZNF852Q6ZMS4 543 aa18.98■□□□□ 0.63
COL7A1-208ENST00000470076 HS6ST3Q8IZP7 471 aa18.98■□□□□ 0.63
COL7A1-208ENST00000470076 SMARCD2Q92925 531 aa18.98■□□□□ 0.63
COL7A1-208ENST00000470076 FAM212AQ96EL1 285 aa18.98■□□□□ 0.63
COL7A1-208ENST00000470076 TRMT61BQ9BVS5 477 aaKnown RBP18.98■□□□□ 0.63
COL7A1-208ENST00000470076 ST6GALNAC4Q9H4F1 302 aa18.98■□□□□ 0.63
COL7A1-208ENST00000470076 BRD9Q9H8M2 597 aa18.98■□□□□ 0.63
COL7A1-208ENST00000470076 SPATA6Q9NWH7 488 aaPredicted RBP18.98■□□□□ 0.63
COL7A1-208ENST00000470076 FBXO4Q9UKT5 387 aa18.98■□□□□ 0.63
COL7A1-208ENST00000470076 MRPS17Q9Y2R5 130 aaKnown RBP18.98■□□□□ 0.63
COL7A1-208ENST00000470076 DERAQ9Y315 318 aa18.98■□□□□ 0.63
COL7A1-208ENST00000470076 MTF2Q9Y483 593 aaPredicted RBP18.98■□□□□ 0.63
COL7A1-208ENST00000470076 YIPF1Q9Y548 306 aa18.98■□□□□ 0.63
COL7A1-208ENST00000470076 VPS37CA5D8V6 355 aaPredicted RBP18.97■□□□□ 0.63
COL7A1-208ENST00000470076 LAMTOR5O43504 91 aa18.97■□□□□ 0.63
COL7A1-208ENST00000470076 ODC1P11926 461 aa18.97■□□□□ 0.63
COL7A1-208ENST00000470076 NMT1P30419 496 aaKnown RBP18.97■□□□□ 0.63
COL7A1-208ENST00000470076 GUCY2FP51841 1108 aa18.97■□□□□ 0.63
COL7A1-208ENST00000470076 LILRA4P59901 499 aa18.97■□□□□ 0.63
COL7A1-208ENST00000470076 CUL4AQ13619 759 aa18.97■□□□□ 0.63
COL7A1-208ENST00000470076 MYBPC2Q14324 1141 aa18.97■□□□□ 0.63
COL7A1-208ENST00000470076 ZNF528Q3MIS6 628 aa18.97■□□□□ 0.63
COL7A1-208ENST00000470076 OVOS1Q6IE37 1185 aa18.97■□□□□ 0.63
COL7A1-208ENST00000470076 JADE1Q6IE81 842 aa18.97■□□□□ 0.63
COL7A1-208ENST00000470076 SLFN12LQ6IEE8 588 aa18.97■□□□□ 0.63
COL7A1-208ENST00000470076 MAML2Q8IZL2 1156 aaPredicted RBP18.97■□□□□ 0.63
COL7A1-208ENST00000470076 KRI1Q8N9T8 703 aaKnown RBP18.97■□□□□ 0.63
COL7A1-208ENST00000470076 CLDN23Q96B33 292 aa18.97■□□□□ 0.63
COL7A1-208ENST00000470076 BORCS6Q96GS4 357 aa18.97■□□□□ 0.63
COL7A1-208ENST00000470076 GPR88Q9GZN0 384 aa18.97■□□□□ 0.63
COL7A1-208ENST00000470076 ASB7Q9H672 318 aa18.97■□□□□ 0.63
COL7A1-208ENST00000470076 HEBP1Q9NRV9 189 aa18.97■□□□□ 0.63
COL7A1-208ENST00000470076 OTOGLQ3ZCN5 2332 aa18.97■□□□□ 0.63
COL7A1-208ENST00000470076 ANK1P16157 1881 aa18.97■□□□□ 0.63
COL7A1-208ENST00000470076 PPEF2O14830 753 aa18.96■□□□□ 0.63
COL7A1-208ENST00000470076 MOSPD3O75425 235 aa18.96■□□□□ 0.63
COL7A1-208ENST00000470076 VNN2O95498 520 aa18.96■□□□□ 0.63
COL7A1-208ENST00000470076 OR4Q2P0C623 313 aa18.96■□□□□ 0.63
COL7A1-208ENST00000470076 PSMC3P17980 439 aa18.96■□□□□ 0.63
COL7A1-208ENST00000470076 TARSP26639 723 aaKnown RBP18.96■□□□□ 0.63
COL7A1-208ENST00000470076 RPS9P46781 194 aaKnown RBP18.96■□□□□ 0.63
COL7A1-208ENST00000470076 EPHB3P54753 998 aa18.96■□□□□ 0.63
COL7A1-208ENST00000470076 DUSP4Q13115 394 aa18.96■□□□□ 0.63
COL7A1-208ENST00000470076 GRM2Q14416 872 aa18.96■□□□□ 0.63
COL7A1-208ENST00000470076 TMEM132DQ14C87 1099 aa18.96■□□□□ 0.63
COL7A1-208ENST00000470076 C9orf57Q5W0N0 161 aa18.96■□□□□ 0.63
COL7A1-208ENST00000470076 DEPDC1BQ8WUY9 529 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms