RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 SMOC2Q9H3U7 446 aa18.53■□□□□ 0.56
SSBP1-207ENST00000468267 KCNK12Q9HB15 430 aa18.53■□□□□ 0.56
SSBP1-207ENST00000468267 IGSF9Q9P2J2 1179 aa18.53■□□□□ 0.56
SSBP1-207ENST00000468267 ARHGEF37A1IGU5 675 aa18.52■□□□□ 0.56
SSBP1-207ENST00000468267 LDHAP00338 332 aaKnown RBP18.52■□□□□ 0.56
SSBP1-207ENST00000468267 ATF2P15336 505 aa18.52■□□□□ 0.56
SSBP1-207ENST00000468267 FSHRP23945 695 aa18.52■□□□□ 0.56
SSBP1-207ENST00000468267 ELF1P32519 619 aa18.52■□□□□ 0.56
SSBP1-207ENST00000468267 NTHL1P78549 312 aa18.52■□□□□ 0.56
SSBP1-207ENST00000468267 YWHAHQ04917 246 aaPredicted RBP18.52■□□□□ 0.56
SSBP1-207ENST00000468267 DSTYKQ6XUX3 929 aa18.52■□□□□ 0.56
SSBP1-207ENST00000468267 TCEAL8Q8IYN2 117 aa18.52■□□□□ 0.56
SSBP1-207ENST00000468267 GLIS3Q8NEA6 775 aa18.52■□□□□ 0.56
SSBP1-207ENST00000468267 SAAL1Q96ER3 474 aa18.52■□□□□ 0.56
SSBP1-207ENST00000468267 OXCT2Q9BYC2 517 aaPredicted RBP18.52■□□□□ 0.56
SSBP1-207ENST00000468267 DPP3Q9NY33 737 aa18.52■□□□□ 0.56
SSBP1-207ENST00000468267 KCNH3Q9ULD8 1083 aa18.52■□□□□ 0.56
SSBP1-207ENST00000468267 POLIQ9UNA4 740 aa18.52■□□□□ 0.56
SSBP1-207ENST00000468267 TIMM13Q9Y5L4 95 aaPredicted RBP18.52■□□□□ 0.56
SSBP1-207ENST00000468267 PRRG1O14668 218 aa18.51■□□□□ 0.55
SSBP1-207ENST00000468267 SPTLC1O15269 473 aa18.51■□□□□ 0.55
SSBP1-207ENST00000468267 LAMP2P13473 410 aa18.51■□□□□ 0.55
SSBP1-207ENST00000468267 TYMPP19971 482 aa18.51■□□□□ 0.55
SSBP1-207ENST00000468267 HOXD13P35453 343 aa18.51■□□□□ 0.55
SSBP1-207ENST00000468267 TDGQ13569 410 aa18.51■□□□□ 0.55
SSBP1-207ENST00000468267 GET4Q7L5D6 327 aaPredicted RBP18.51■□□□□ 0.55
SSBP1-207ENST00000468267 EPM2AIP1Q7L775 607 aaPredicted RBP18.51■□□□□ 0.55
SSBP1-207ENST00000468267 USP37Q86T82 979 aa18.51■□□□□ 0.55
SSBP1-207ENST00000468267 NT5DC4Q86YG4 428 aa18.51■□□□□ 0.55
SSBP1-207ENST00000468267 EFCAB13Q8IY85 973 aa18.51■□□□□ 0.55
SSBP1-207ENST00000468267 LEO1Q8WVC0 666 aaPredicted RBP18.51■□□□□ 0.55
SSBP1-207ENST00000468267 SENP8Q96LD8 212 aa18.51■□□□□ 0.55
SSBP1-207ENST00000468267 PYM1Q9BRP8 204 aaKnown RBP18.51■□□□□ 0.55
SSBP1-207ENST00000468267 CBWD1Q9BRT8 395 aa18.51■□□□□ 0.55
SSBP1-207ENST00000468267 MAFFQ9ULX9 164 aa18.51■□□□□ 0.55
SSBP1-207ENST00000468267 ZFP37Q9Y6Q3 630 aaPredicted RBP18.51■□□□□ 0.55
SSBP1-207ENST00000468267 EIF3DO15371 548 aaKnown RBP eCLIP18.5■□□□□ 0.55
SSBP1-207ENST00000468267 EXTL3O43909 919 aa18.5■□□□□ 0.55
SSBP1-207ENST00000468267 SEC24AO95486 1093 aa18.5■□□□□ 0.55
SSBP1-207ENST00000468267 EHHADHQ08426 723 aa18.5■□□□□ 0.55
SSBP1-207ENST00000468267 FAM26FQ5R3K3 315 aa18.5■□□□□ 0.55
SSBP1-207ENST00000468267 UNC13DQ70J99 1090 aa18.5■□□□□ 0.55
SSBP1-207ENST00000468267 BRSK2Q8IWQ3 736 aa18.5■□□□□ 0.55
SSBP1-207ENST00000468267 FBXL6Q8N531 539 aa18.5■□□□□ 0.55
SSBP1-207ENST00000468267 ZNF507Q8TCN5 953 aa18.5■□□□□ 0.55
SSBP1-207ENST00000468267 NXPE3Q969Y0 559 aa18.5■□□□□ 0.55
SSBP1-207ENST00000468267 PCIF1Q9H4Z3 704 aa18.5■□□□□ 0.55
SSBP1-207ENST00000468267 CYP4F11Q9HBI6 524 aa18.5■□□□□ 0.55
SSBP1-207ENST00000468267 HCFC1R1Q9NWW0 138 aa18.5■□□□□ 0.55
SSBP1-207ENST00000468267 DNMT3BQ9UBC3 853 aaKnown RBP18.5■□□□□ 0.55
SSBP1-207ENST00000468267 AFF4Q9UHB7 1163 aaKnown RBP18.5■□□□□ 0.55
SSBP1-207ENST00000468267 CACNA1HO95180 2353 aa18.49■□□□□ 0.55
SSBP1-207ENST00000468267 GOLGA8IPA6NC78 632 aa18.49■□□□□ 0.55
SSBP1-207ENST00000468267 OR6C75A6NL08 312 aa18.49■□□□□ 0.55
SSBP1-207ENST00000468267 GOLGA8JA6NMD2 632 aa18.49■□□□□ 0.55
SSBP1-207ENST00000468267 KIAA0391O15091 583 aaKnown RBP18.49■□□□□ 0.55
SSBP1-207ENST00000468267 SLFN14P0C7P3 912 aa18.49■□□□□ 0.55
SSBP1-207ENST00000468267 ODC1P11926 461 aa18.49■□□□□ 0.55
SSBP1-207ENST00000468267 CMA1P23946 247 aa18.49■□□□□ 0.55
SSBP1-207ENST00000468267 CASP1P29466 404 aa18.49■□□□□ 0.55
SSBP1-207ENST00000468267 WNT7BP56706 349 aa18.49■□□□□ 0.55
SSBP1-207ENST00000468267 KRT85P78386 507 aa18.49■□□□□ 0.55
SSBP1-207ENST00000468267 PABPC1LQ4VXU2 614 aaKnown RBP18.49■□□□□ 0.55
SSBP1-207ENST00000468267 OVOS1Q6IE37 1185 aa18.49■□□□□ 0.55
SSBP1-207ENST00000468267 ARMCX5Q6P1M9 558 aa18.49■□□□□ 0.55
SSBP1-207ENST00000468267 CEP57L1Q8IYX8 460 aa18.49■□□□□ 0.55
SSBP1-207ENST00000468267 RSAD2Q8WXG1 361 aa18.49■□□□□ 0.55
SSBP1-207ENST00000468267 CHAMP1Q96JM3 812 aa18.49■□□□□ 0.55
SSBP1-207ENST00000468267 SPATA32Q96LK8 384 aa18.49■□□□□ 0.55
SSBP1-207ENST00000468267 BLZF1Q9H2G9 400 aa18.49■□□□□ 0.55
SSBP1-207ENST00000468267 RBAKQ9NYW8 714 aaPredicted RBP18.49■□□□□ 0.55
SSBP1-207ENST00000468267 CDH7Q9ULB5 785 aa18.49■□□□□ 0.55
SSBP1-207ENST00000468267 PIEZO1Q92508 2521 aa18.49■□□□□ 0.55
SSBP1-207ENST00000468267 PVALEFA0A1B0GWK0 134 aa18.48■□□□□ 0.55
SSBP1-207ENST00000468267 ANHXE9PGG2 379 aa18.48■□□□□ 0.55
SSBP1-207ENST00000468267 LRG1P02750 347 aa18.48■□□□□ 0.55
SSBP1-207ENST00000468267 CYP11A1P05108 521 aa18.48■□□□□ 0.55
SSBP1-207ENST00000468267 CPB1P15086 417 aa18.48■□□□□ 0.55
SSBP1-207ENST00000468267 PTPN2P17706 415 aa18.48■□□□□ 0.55
SSBP1-207ENST00000468267 AFMP43652 599 aa18.48■□□□□ 0.55
SSBP1-207ENST00000468267 ADCY1Q08828 1119 aa18.48■□□□□ 0.55
SSBP1-207ENST00000468267 CUL4BQ13620 913 aa18.48■□□□□ 0.55
SSBP1-207ENST00000468267 RNF19BQ6ZMZ0 732 aa18.48■□□□□ 0.55
SSBP1-207ENST00000468267 SUGP1Q8IWZ8 645 aaKnown RBP18.48■□□□□ 0.55
SSBP1-207ENST00000468267 GPD1LQ8N335 351 aa18.48■□□□□ 0.55
SSBP1-207ENST00000468267 ITFG1Q8TB96 612 aa18.48■□□□□ 0.55
SSBP1-207ENST00000468267 CACTINQ8WUQ7 758 aaKnown RBP18.48■□□□□ 0.55
SSBP1-207ENST00000468267 KCNH6Q9H252 994 aa18.48■□□□□ 0.55
SSBP1-207ENST00000468267 AVENQ9NQS1 362 aaPredicted RBP18.48■□□□□ 0.55
SSBP1-207ENST00000468267 SERTAD1Q9UHV2 236 aa18.48■□□□□ 0.55
SSBP1-207ENST00000468267 DUSP12Q9UNI6 340 aa18.48■□□□□ 0.55
SSBP1-207ENST00000468267 ATP6V1DQ9Y5K8 247 aa18.48■□□□□ 0.55
SSBP1-207ENST00000468267 INSL5Q9Y5Q6 135 aa18.48■□□□□ 0.55
SSBP1-207ENST00000468267 TSC2P49815 1807 aa18.48■□□□□ 0.55
SSBP1-207ENST00000468267 A0A1B0GVL5 298 aa18.47■□□□□ 0.55
SSBP1-207ENST00000468267 ACTN4O43707 911 aaKnown RBP18.47■□□□□ 0.55
SSBP1-207ENST00000468267 PDGFBP01127 241 aaPredicted RBP18.47■□□□□ 0.55
SSBP1-207ENST00000468267 RHOP08100 348 aa18.47■□□□□ 0.55
SSBP1-207ENST00000468267 TAF6P49848 677 aa18.47■□□□□ 0.55
SSBP1-207ENST00000468267 TFAMQ00059 246 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms